RNA–Protein interactions for RNA: ENST00000616577.4

TPT1-214, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 3 BASIC

Gene TPT1, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-214ENST00000616577 CFTRP13569 1480 aa12.91□□□□□ -0.34
TPT1-214ENST00000616577 PNISRQ8TF01 805 aaKnown RBP12.9□□□□□ -0.34
TPT1-214ENST00000616577 GGNBP2Q9H3C7 697 aa12.9□□□□□ -0.35
TPT1-214ENST00000616577 MIA2Q96PC5 1412 aa12.9□□□□□ -0.35
TPT1-214ENST00000616577 SYNJ1O43426 1573 aa12.89□□□□□ -0.35
TPT1-214ENST00000616577 FYCO1Q9BQS8 1478 aa12.89□□□□□ -0.35
TPT1-214ENST00000616577 REC8O95072 547 aa12.89□□□□□ -0.35
TPT1-214ENST00000616577 NECTIN2Q92692 538 aa12.89□□□□□ -0.35
TPT1-214ENST00000616577 ISY1Q9ULR0 285 aaKnown RBP12.89□□□□□ -0.35
TPT1-214ENST00000616577 API5Q9BZZ5 524 aaKnown RBP12.88□□□□□ -0.35
TPT1-214ENST00000616577 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
TPT1-214ENST00000616577 PPP2R1AP30153 589 aa12.88□□□□□ -0.35
TPT1-214ENST00000616577 TCP11L2Q8N4U5 519 aa12.88□□□□□ -0.35
TPT1-214ENST00000616577 FRAT2O75474 233 aaPredicted RBP12.88□□□□□ -0.35
TPT1-214ENST00000616577 HMOX1P09601 288 aa12.88□□□□□ -0.35
TPT1-214ENST00000616577 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
TPT1-214ENST00000616577 TMEM132EQ6IEE7 984 aa12.88□□□□□ -0.35
TPT1-214ENST00000616577 MTHFSP49914 203 aa12.87□□□□□ -0.35
TPT1-214ENST00000616577 EID1Q9Y6B2 187 aa12.87□□□□□ -0.35
TPT1-214ENST00000616577 BRPF3Q9ULD4 1205 aa12.87□□□□□ -0.35
TPT1-214ENST00000616577 ERICH3Q5RHP9 1530 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 CFAP70Q5T0N1 1121 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 ANO2Q9NQ90 1003 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 WDR97A6NE52 1622 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 PRXQ9BXM0 1461 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
TPT1-214ENST00000616577 TPM4P67936 248 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 SF3A1Q15459 793 aaKnown RBP12.86□□□□□ -0.35
TPT1-214ENST00000616577 VSIG10Q8N0Z9 540 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
TPT1-214ENST00000616577 BCAR3O75815 825 aa12.85□□□□□ -0.35
TPT1-214ENST00000616577 DIAPH3Q9NSV4 1193 aa12.85□□□□□ -0.35
TPT1-214ENST00000616577 AQRO60306 1485 aaKnown RBP eCLIP12.85□□□□□ -0.355e-9■■■■■ 28.2
TPT1-214ENST00000616577 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
TPT1-214ENST00000616577 ATP6V1DQ9Y5K8 247 aa12.85□□□□□ -0.35
TPT1-214ENST00000616577 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
TPT1-214ENST00000616577 H3BQV1 296 aa12.84□□□□□ -0.35
TPT1-214ENST00000616577 IFFO2Q5TF58 517 aa12.84□□□□□ -0.35
TPT1-214ENST00000616577 FKBP5Q13451 457 aaPredicted RBP12.83□□□□□ -0.35
TPT1-214ENST00000616577 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.35
TPT1-214ENST00000616577 TEFQ10587 303 aa12.83□□□□□ -0.36
TPT1-214ENST00000616577 HFM1A2PYH4 1435 aa12.83□□□□□ -0.36
TPT1-214ENST00000616577 MCTP1Q6DN14 999 aa12.83□□□□□ -0.36
TPT1-214ENST00000616577 TOMM22Q9NS69 142 aa12.83□□□□□ -0.36
TPT1-214ENST00000616577 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
TPT1-214ENST00000616577 KIF3AQ9Y496 699 aa12.82□□□□□ -0.36
TPT1-214ENST00000616577 GNAI1P63096 354 aa12.82□□□□□ -0.36
TPT1-214ENST00000616577 AFAP1Q8N556 730 aa12.82□□□□□ -0.36
TPT1-214ENST00000616577 STAC3Q96MF2 364 aa12.82□□□□□ -0.36
TPT1-214ENST00000616577 INTS3Q68E01 1043 aaKnown RBP12.81□□□□□ -0.36
TPT1-214ENST00000616577 CREBRFQ8IUR6 639 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 AAMPQ13685 434 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 C9orf78Q9NZ63 289 aaPredicted RBP12.81□□□□□ -0.36
TPT1-214ENST00000616577 BECN2A8MW95 431 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 NUCB2P80303 420 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 EXOSC9Q06265 439 aaKnown RBP12.81□□□□□ -0.36
TPT1-214ENST00000616577 NCAPD3P42695 1498 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 FAM13BQ9NYF5 915 aa12.81□□□□□ -0.36
TPT1-214ENST00000616577 GOLGA6L19H0YKK7 550 aa12.8□□□□□ -0.36
TPT1-214ENST00000616577 TRAK2O60296 914 aa12.8□□□□□ -0.36
TPT1-214ENST00000616577 FAM43AQ8N2R8 423 aa12.8□□□□□ -0.36
TPT1-214ENST00000616577 SMG6Q86US8 1419 aaKnown RBP12.8□□□□□ -0.36
TPT1-214ENST00000616577 ZKSCAN1P17029 563 aaPredicted RBP12.8□□□□□ -0.36
TPT1-214ENST00000616577 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
TPT1-214ENST00000616577 C11orf95C9JLR9 678 aaPredicted RBP12.79□□□□□ -0.36
TPT1-214ENST00000616577 PDE3AQ14432 1141 aa12.79□□□□□ -0.36
TPT1-214ENST00000616577 TSR2Q969E8 191 aaKnown RBP12.79□□□□□ -0.36
TPT1-214ENST00000616577 MSH5O43196 834 aa12.79□□□□□ -0.36
TPT1-214ENST00000616577 SLC12A5Q9H2X9 1139 aa12.79□□□□□ -0.36
TPT1-214ENST00000616577 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
TPT1-214ENST00000616577 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
TPT1-214ENST00000616577 RUFY2Q8WXA3 655 aa12.79□□□□□ -0.36
TPT1-214ENST00000616577 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
TPT1-214ENST00000616577 MRE11P49959 708 aa12.78□□□□□ -0.36
TPT1-214ENST00000616577 CDC45O75419 566 aa12.78□□□□□ -0.36
TPT1-214ENST00000616577 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.78□□□□□ -0.36
TPT1-214ENST00000616577 RASSF8Q8NHQ8 419 aa12.78□□□□□ -0.36
TPT1-214ENST00000616577 TSPYL4Q9UJ04 414 aa12.78□□□□□ -0.36
TPT1-214ENST00000616577 C1orf141Q5JVX7 400 aa12.78□□□□□ -0.36
TPT1-214ENST00000616577 IFIT2P09913 472 aaKnown RBP12.77□□□□□ -0.36
TPT1-214ENST00000616577 C1orf115Q9H7X2 142 aa12.77□□□□□ -0.36
TPT1-214ENST00000616577 RNF214Q8ND24 703 aa12.77□□□□□ -0.36
TPT1-214ENST00000616577 ROCK1Q13464 1354 aa12.77□□□□□ -0.37
TPT1-214ENST00000616577 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
TPT1-214ENST00000616577 CLSTN1O94985 981 aa12.77□□□□□ -0.37
TPT1-214ENST00000616577 ZNF592Q92610 1267 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 NASPP49321 788 aaPredicted RBP12.76□□□□□ -0.37
TPT1-214ENST00000616577 TIAM1Q13009 1591 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 PRDM2Q13029 1718 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 PRKAR2BP31323 418 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 NEXNQ0ZGT2 675 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 SMC3Q9UQE7 1217 aa12.76□□□□□ -0.37
TPT1-214ENST00000616577 BICD2Q8TD16 824 aa12.75□□□□□ -0.37
TPT1-214ENST00000616577 NAIPQ13075 1403 aa12.75□□□□□ -0.37
TPT1-214ENST00000616577 CAVIN1Q6NZI2 390 aaKnown RBP12.74□□□□□ -0.37
TPT1-214ENST00000616577 PRG4Q92954 1404 aaPredicted RBP12.73□□□□□ -0.37
TPT1-214ENST00000616577 TNNT3P45378 269 aaPredicted RBP12.73□□□□□ -0.37
TPT1-214ENST00000616577 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.73□□□□□ -0.37
TPT1-214ENST00000616577 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
TPT1-214ENST00000616577 CCAR2Q8N163 923 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms