RNA–Protein interactions for RNA: ENST00000616246.4

POLR3A-205, Transcript of RNA polymerase III subunit A, humanhuman

TSL 1 (best) BASIC

Gene POLR3A, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3A-205ENST00000616246 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
POLR3A-205ENST00000616246 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
POLR3A-205ENST00000616246 NEXMIFQ5QGS0 1516 aa16.02■□□□□ 0.15
POLR3A-205ENST00000616246 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.15
POLR3A-205ENST00000616246 CERKQ8TCT0 537 aa16.01■□□□□ 0.15
POLR3A-205ENST00000616246 NRXN3Q9Y4C0 1643 aa16.01■□□□□ 0.15
POLR3A-205ENST00000616246 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
POLR3A-205ENST00000616246 EID1Q9Y6B2 187 aa16■□□□□ 0.15
POLR3A-205ENST00000616246 PPLO60437 1756 aa15.99■□□□□ 0.15
POLR3A-205ENST00000616246 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
POLR3A-205ENST00000616246 XIRP1Q702N8 1843 aaKnown RBP15.99■□□□□ 0.15
POLR3A-205ENST00000616246 SENP3Q9H4L4 574 aaPredicted RBP15.98■□□□□ 0.15
POLR3A-205ENST00000616246 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
POLR3A-205ENST00000616246 ADAMTS13Q76LX8 1427 aa15.97■□□□□ 0.15
POLR3A-205ENST00000616246 CHD2O14647 1828 aaKnown RBP15.96■□□□□ 0.15
POLR3A-205ENST00000616246 SLC26A8Q96RN1 970 aa15.96■□□□□ 0.15
POLR3A-205ENST00000616246 SPATA31E1Q6ZUB1 1445 aa15.96■□□□□ 0.15
POLR3A-205ENST00000616246 ILDR1Q86SU0 546 aaPredicted RBP15.95■□□□□ 0.14
POLR3A-205ENST00000616246 ACIN1Q9UKV3 1341 aaKnown RBP15.95■□□□□ 0.14
POLR3A-205ENST00000616246 CPS1P31327 1500 aa15.95■□□□□ 0.14
POLR3A-205ENST00000616246 ANKRD30BQ9BXX2 1392 aa15.94■□□□□ 0.14
POLR3A-205ENST00000616246 SETD1AO15047 1707 aaKnown RBP15.94■□□□□ 0.14
POLR3A-205ENST00000616246 CCDC144AA2RUR9 1427 aa15.94■□□□□ 0.14
POLR3A-205ENST00000616246 NWD1Q149M9 1564 aa15.94■□□□□ 0.14
POLR3A-205ENST00000616246 SETBP1Q9Y6X0 1596 aa15.94■□□□□ 0.14
POLR3A-205ENST00000616246 IQSEC2Q5JU85 1478 aa15.93■□□□□ 0.14
POLR3A-205ENST00000616246 LRRC7Q96NW7 1537 aa15.93■□□□□ 0.14
POLR3A-205ENST00000616246 ZNF326Q5BKZ1 582 aaKnown RBP15.92■□□□□ 0.14
POLR3A-205ENST00000616246 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.92■□□□□ 0.14
POLR3A-205ENST00000616246 ALKQ9UM73 1620 aa15.92■□□□□ 0.14
POLR3A-205ENST00000616246 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
POLR3A-205ENST00000616246 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
POLR3A-205ENST00000616246 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
POLR3A-205ENST00000616246 PTPRUQ92729 1446 aa15.9■□□□□ 0.14
POLR3A-205ENST00000616246 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
POLR3A-205ENST00000616246 TBX22Q9Y458 520 aa15.88■□□□□ 0.13
POLR3A-205ENST00000616246 XRN1Q8IZH2 1706 aaKnown RBP15.87■□□□□ 0.13
POLR3A-205ENST00000616246 KCNA6P17658 529 aa15.86■□□□□ 0.13
POLR3A-205ENST00000616246 RGL3Q3MIN7 710 aa15.86■□□□□ 0.13
POLR3A-205ENST00000616246 MYT1Q01538 1121 aa15.86■□□□□ 0.13
POLR3A-205ENST00000616246 BCANQ96GW7 911 aa15.86■□□□□ 0.13
POLR3A-205ENST00000616246 METP08581 1390 aa15.85■□□□□ 0.13
POLR3A-205ENST00000616246 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
POLR3A-205ENST00000616246 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
POLR3A-205ENST00000616246 NKTRP30414 1462 aaKnown RBP15.84■□□□□ 0.13
POLR3A-205ENST00000616246 RBM33Q96EV2 1170 aaKnown RBP15.83■□□□□ 0.13
POLR3A-205ENST00000616246 PIK3R4Q99570 1358 aa15.82■□□□□ 0.12
POLR3A-205ENST00000616246 NRXN1Q9ULB1 1477 aa15.82■□□□□ 0.12
POLR3A-205ENST00000616246 VGFO15240 615 aaPredicted RBP15.82■□□□□ 0.12
POLR3A-205ENST00000616246 ZEB1P37275 1124 aaPredicted RBP15.82■□□□□ 0.12
POLR3A-205ENST00000616246 ASXL1Q8IXJ9 1541 aa15.81■□□□□ 0.12
POLR3A-205ENST00000616246 TMEM94Q12767 1356 aa15.81■□□□□ 0.12
POLR3A-205ENST00000616246 PIK3C2GO75747 1445 aa15.81■□□□□ 0.12
POLR3A-205ENST00000616246 DHX57Q6P158 1386 aaKnown RBP15.8■□□□□ 0.12
POLR3A-205ENST00000616246 MYOM2P54296 1465 aa15.79■□□□□ 0.12
POLR3A-205ENST00000616246 AMOTL2Q9Y2J4 779 aa15.78■□□□□ 0.12
POLR3A-205ENST00000616246 UBAP1LF5GYI3 381 aa15.77■□□□□ 0.12
POLR3A-205ENST00000616246 PROSER2Q86WR7 435 aaPredicted RBP15.77■□□□□ 0.12
POLR3A-205ENST00000616246 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.76■□□□□ 0.11
POLR3A-205ENST00000616246 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
POLR3A-205ENST00000616246 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
POLR3A-205ENST00000616246 KNDC1Q76NI1 1749 aa15.73■□□□□ 0.11
POLR3A-205ENST00000616246 SIN3AQ96ST3 1273 aa15.73■□□□□ 0.11
POLR3A-205ENST00000616246 ROBO2Q9HCK4 1378 aa15.73■□□□□ 0.11
POLR3A-205ENST00000616246 LAMC1P11047 1609 aa15.72■□□□□ 0.11
POLR3A-205ENST00000616246 NCOA3Q9Y6Q9 1424 aa15.72■□□□□ 0.11
POLR3A-205ENST00000616246 PTCH1Q13635 1447 aa15.71■□□□□ 0.11
POLR3A-205ENST00000616246 ADGRB1O14514 1584 aa15.71■□□□□ 0.11
POLR3A-205ENST00000616246 TOM1O60784 492 aa15.7■□□□□ 0.1
POLR3A-205ENST00000616246 CFAP70Q5T0N1 1121 aa15.7■□□□□ 0.1
POLR3A-205ENST00000616246 TMEM132EQ6IEE7 984 aa15.7■□□□□ 0.1
POLR3A-205ENST00000616246 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
POLR3A-205ENST00000616246 C14orf93Q9H972 538 aaKnown RBP15.7■□□□□ 0.1
POLR3A-205ENST00000616246 PIP4K2BP78356 416 aa15.7■□□□□ 0.1
POLR3A-205ENST00000616246 KDM2AQ9Y2K7 1162 aa15.69■□□□□ 0.1
POLR3A-205ENST00000616246 TECPR2O15040 1411 aa15.69■□□□□ 0.1
POLR3A-205ENST00000616246 ROBO1Q9Y6N7 1651 aa15.68■□□□□ 0.1
POLR3A-205ENST00000616246 MSH6P52701 1360 aa15.68■□□□□ 0.1
POLR3A-205ENST00000616246 LRPPRCP42704 1394 aaKnown RBP15.67■□□□□ 0.1
POLR3A-205ENST00000616246 YTHDC2Q9H6S0 1430 aaKnown RBP15.66■□□□□ 0.1
POLR3A-205ENST00000616246 ADGRL3Q9HAR2 1447 aa15.66■□□□□ 0.1
POLR3A-205ENST00000616246 ABCC11Q96J66 1382 aa15.66■□□□□ 0.1
POLR3A-205ENST00000616246 PLEKHH1Q9ULM0 1364 aa15.66■□□□□ 0.1
POLR3A-205ENST00000616246 KIAA1210Q9ULL0 1709 aa15.65■□□□□ 0.1
POLR3A-205ENST00000616246 C19orf44Q9H6X5 657 aa15.64■□□□□ 0.09
POLR3A-205ENST00000616246 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
POLR3A-205ENST00000616246 FAM135BQ49AJ0 1406 aa15.64■□□□□ 0.09
POLR3A-205ENST00000616246 HSPA1LP34931 641 aa15.63■□□□□ 0.09
POLR3A-205ENST00000616246 L3MBTL2Q969R5 705 aa15.63■□□□□ 0.09
POLR3A-205ENST00000616246 STK26Q9P289 416 aa15.63■□□□□ 0.09
POLR3A-205ENST00000616246 DCCP43146 1447 aa15.63■□□□□ 0.09
POLR3A-205ENST00000616246 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
POLR3A-205ENST00000616246 NEUROD1Q13562 356 aa15.62■□□□□ 0.09
POLR3A-205ENST00000616246 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
POLR3A-205ENST00000616246 ARHGEF28Q8N1W1 1705 aaKnown RBP15.62■□□□□ 0.09
POLR3A-205ENST00000616246 MST1RQ04912 1400 aa15.62■□□□□ 0.09
POLR3A-205ENST00000616246 SLAIN2Q9P270 581 aa15.61■□□□□ 0.09
POLR3A-205ENST00000616246 DLC1Q96QB1 1528 aa15.6■□□□□ 0.09
POLR3A-205ENST00000616246 C14orf37Q86TY3 774 aa15.6■□□□□ 0.09
POLR3A-205ENST00000616246 TRPM1Q7Z4N2 1603 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms