RNA–Protein interactions for RNA: ENST00000615093.1

RAB43-208, Transcript of RAB43, member RAS oncogene family, human

TSL 5 BASIC

Gene RAB43, Length 783 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB43-208	ENST00000615093	XIRP1	Q702N8	1843 aa	Known RBP	32.72	■■■□□ 2.83
RAB43-208	ENST00000615093	CHGA	P10645	457 aa	Known RBP	32.69	■■■□□ 2.82
RAB43-208	ENST00000615093	HDGF	P51858	240 aa	Known RBP	32.69	■■■□□ 2.82
RAB43-208	ENST00000615093	PLEKHG1	Q9ULL1	1385 aa		32.69	■■■□□ 2.82
RAB43-208	ENST00000615093	SPHKAP	Q2M3C7	1700 aa		32.68	■■■□□ 2.82
RAB43-208	ENST00000615093	KCNA6	P17658	529 aa		32.67	■■■□□ 2.82
RAB43-208	ENST00000615093	HFM1	A2PYH4	1435 aa		32.66	■■■□□ 2.82
RAB43-208	ENST00000615093	BCAN	Q96GW7	911 aa		32.65	■■■□□ 2.82
RAB43-208	ENST00000615093	PPP1R15A	O75807	674 aa	Predicted RBP	32.64	■■■□□ 2.82
RAB43-208	ENST00000615093	NWD1	Q149M9	1564 aa		32.64	■■■□□ 2.82
RAB43-208	ENST00000615093	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.64	■■■□□ 2.82
RAB43-208	ENST00000615093	DISP3	Q9P2K9	1392 aa		32.64	■■■□□ 2.82
RAB43-208	ENST00000615093	HSPA1L	P34931	641 aa		32.63	■■■□□ 2.81
RAB43-208	ENST00000615093	SENP3	Q9H4L4	574 aa	Predicted RBP	32.59	■■■□□ 2.81
RAB43-208	ENST00000615093	NKTR	P30414	1462 aa	Known RBP	32.59	■■■□□ 2.81
RAB43-208	ENST00000615093	CHD2	O14647	1828 aa	Known RBP	32.58	■■■□□ 2.81
RAB43-208	ENST00000615093	TMEM94	Q12767	1356 aa		32.58	■■■□□ 2.81
RAB43-208	ENST00000615093	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.55	■■■□□ 2.8
RAB43-208	ENST00000615093	PROSER2	Q86WR7	435 aa	Predicted RBP	32.55	■■■□□ 2.8
RAB43-208	ENST00000615093	TBX22	Q9Y458	520 aa		32.55	■■■□□ 2.8
RAB43-208	ENST00000615093	ADAMTS13	Q76LX8	1427 aa		32.53	■■■□□ 2.8
RAB43-208	ENST00000615093	TRPM2	O94759	1503 aa		32.53	■■■□□ 2.8
RAB43-208	ENST00000615093	CLTCL1	P53675	1640 aa		32.52	■■■□□ 2.8
RAB43-208	ENST00000615093	TRIM52	Q96A61	297 aa		32.52	■■■□□ 2.8
RAB43-208	ENST00000615093	DIP2A	Q14689	1571 aa		32.52	■■■□□ 2.8
RAB43-208	ENST00000615093	RBM33	Q96EV2	1170 aa	Known RBP	32.47	■■■□□ 2.79
RAB43-208	ENST00000615093	PIK3R4	Q99570	1358 aa		32.45	■■■□□ 2.78
RAB43-208	ENST00000615093	KIF1B	O60333	1816 aa		32.44	■■■□□ 2.78
RAB43-208	ENST00000615093	ZNF326	Q5BKZ1	582 aa	Known RBP	32.43	■■■□□ 2.78
RAB43-208	ENST00000615093	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.43	■■■□□ 2.78
RAB43-208	ENST00000615093	NRXN3	Q9Y4C0	1643 aa		32.41	■■■□□ 2.78
RAB43-208	ENST00000615093	ILDR2	Q71H61	639 aa		32.41	■■■□□ 2.78
RAB43-208	ENST00000615093	SETBP1	Q9Y6X0	1596 aa		32.41	■■■□□ 2.78
RAB43-208	ENST00000615093	FAM135B	Q49AJ0	1406 aa		32.4	■■■□□ 2.78
RAB43-208	ENST00000615093	MSH6	P52701	1360 aa		32.39	■■■□□ 2.78
RAB43-208	ENST00000615093	NEXMIF	Q5QGS0	1516 aa		32.39	■■■□□ 2.78
RAB43-208	ENST00000615093	MED1	Q15648	1581 aa	Predicted RBP	32.37	■■■□□ 2.77
RAB43-208	ENST00000615093	NCOA3	Q9Y6Q9	1424 aa		32.36	■■■□□ 2.77
RAB43-208	ENST00000615093	PTPRU	Q92729	1446 aa		32.34	■■■□□ 2.77
RAB43-208	ENST00000615093	ROBO1	Q9Y6N7	1651 aa		32.34	■■■□□ 2.77
RAB43-208	ENST00000615093	AMOTL2	Q9Y2J4	779 aa		32.31	■■■□□ 2.76
RAB43-208	ENST00000615093	XRN1	Q8IZH2	1706 aa	Known RBP	32.29	■■■□□ 2.76
RAB43-208	ENST00000615093	FOXD1	Q16676	465 aa		32.26	■■■□□ 2.75
RAB43-208	ENST00000615093	SLAIN2	Q9P270	581 aa		32.26	■■■□□ 2.75
RAB43-208	ENST00000615093	MET	P08581	1390 aa		32.25	■■■□□ 2.75
RAB43-208	ENST00000615093	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.25	■■■□□ 2.75
RAB43-208	ENST00000615093	C14orf37	Q86TY3	774 aa		32.24	■■■□□ 2.75
RAB43-208	ENST00000615093	MPHOSPH9	Q99550	1183 aa		32.23	■■■□□ 2.75
RAB43-208	ENST00000615093	RPGRIP1L	Q68CZ1	1315 aa		32.23	■■■□□ 2.75
RAB43-208	ENST00000615093	SETD5	Q9C0A6	1442 aa		32.21	■■■□□ 2.75
RAB43-208	ENST00000615093	VGF	O15240	615 aa	Predicted RBP	32.21	■■■□□ 2.75
RAB43-208	ENST00000615093	C19orf44	Q9H6X5	657 aa		32.21	■■■□□ 2.75
RAB43-208	ENST00000615093	PPL	O60437	1756 aa		32.21	■■■□□ 2.75
RAB43-208	ENST00000615093	ACIN1	Q9UKV3	1341 aa	Known RBP	32.2	■■■□□ 2.74
RAB43-208	ENST00000615093	SETD1A	O15047	1707 aa	Known RBP	32.17	■■■□□ 2.74
RAB43-208	ENST00000615093	CADPS2	Q86UW7	1296 aa		32.17	■■■□□ 2.74
RAB43-208	ENST00000615093	CCDC144A	A2RUR9	1427 aa		32.17	■■■□□ 2.74
RAB43-208	ENST00000615093	SOCS7	O14512	581 aa		32.14	■■■□□ 2.74
RAB43-208	ENST00000615093	ATF3	P18847	181 aa		32.14	■■■□□ 2.74
RAB43-208	ENST00000615093	PHLPP1	O60346	1717 aa		32.14	■■■□□ 2.74
RAB43-208	ENST00000615093	DCC	P43146	1447 aa		32.12	■■■□□ 2.73
RAB43-208	ENST00000615093	SPATA31E1	Q6ZUB1	1445 aa		32.1	■■■□□ 2.73
RAB43-208	ENST00000615093	PHF23	Q9BUL5	403 aa	Predicted RBP	32.1	■■■□□ 2.73
RAB43-208	ENST00000615093	RAB3GAP2	Q9H2M9	1393 aa		32.08	■■■□□ 2.73
RAB43-208	ENST00000615093	IFT172	Q9UG01	1749 aa		32.06	■■■□□ 2.72
RAB43-208	ENST00000615093	COL16A1	Q07092	1604 aa	Predicted RBP	32.05	■■■□□ 2.72
RAB43-208	ENST00000615093	ADGRL3	Q9HAR2	1447 aa		32.05	■■■□□ 2.72
RAB43-208	ENST00000615093	NALCN	Q8IZF0	1738 aa		32.04	■■■□□ 2.72
RAB43-208	ENST00000615093	PTCH1	Q13635	1447 aa		32.04	■■■□□ 2.72
RAB43-208	ENST00000615093	RGL3	Q3MIN7	710 aa		32.04	■■■□□ 2.72
RAB43-208	ENST00000615093	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.04	■■■□□ 2.72
RAB43-208	ENST00000615093	PRAG1	Q86YV5	1406 aa		32.03	■■■□□ 2.72
RAB43-208	ENST00000615093	ADGRF5	Q8IZF2	1346 aa		32.01	■■■□□ 2.72
RAB43-208	ENST00000615093	MST1R	Q04912	1400 aa		32	■■■□□ 2.71
RAB43-208	ENST00000615093	ANKRD30B	Q9BXX2	1392 aa		32	■■■□□ 2.71
RAB43-208	ENST00000615093	ROBO2	Q9HCK4	1378 aa		31.99	■■■□□ 2.71
RAB43-208	ENST00000615093	JCAD	Q9P266	1359 aa		31.99	■■■□□ 2.71
RAB43-208	ENST00000615093	BRINP3	Q76B58	766 aa		31.99	■■■□□ 2.71
RAB43-208	ENST00000615093	ASXL1	Q8IXJ9	1541 aa		31.95	■■■□□ 2.7
RAB43-208	ENST00000615093	RGS17	Q9UGC6	210 aa	Predicted RBP	31.93	■■■□□ 2.7
RAB43-208	ENST00000615093	PIK3C2G	O75747	1445 aa		31.91	■■■□□ 2.7
RAB43-208	ENST00000615093	NHSL1	Q5SYE7	1610 aa		31.9	■■■□□ 2.7
RAB43-208	ENST00000615093	SHPRH	Q149N8	1683 aa		31.89	■■■□□ 2.7
RAB43-208	ENST00000615093	HRC	P23327	699 aa		31.88	■■■□□ 2.69
RAB43-208	ENST00000615093	C1orf167	Q5SNV9	1468 aa		31.85	■■■□□ 2.69
RAB43-208	ENST00000615093	TECPR2	O15040	1411 aa		31.84	■■■□□ 2.69
RAB43-208	ENST00000615093	SPATA31A6	Q5VVP1	1343 aa		31.84	■■■□□ 2.69
RAB43-208	ENST00000615093	NRXN1	Q9ULB1	1477 aa		31.84	■■■□□ 2.69
RAB43-208	ENST00000615093	LRPPRC	P42704	1394 aa	Known RBP	31.83	■■■□□ 2.69
RAB43-208	ENST00000615093	MYOM2	P54296	1465 aa		31.83	■■■□□ 2.69
RAB43-208	ENST00000615093	KNDC1	Q76NI1	1749 aa		31.83	■■■□□ 2.69
RAB43-208	ENST00000615093	ABCC11	Q96J66	1382 aa		31.81	■■■□□ 2.68
RAB43-208	ENST00000615093	LRP6	O75581	1613 aa		31.8	■■■□□ 2.68
RAB43-208	ENST00000615093	TMEM132E	Q6IEE7	984 aa		31.8	■■■□□ 2.68
RAB43-208	ENST00000615093	STK26	Q9P289	416 aa		31.8	■■■□□ 2.68
RAB43-208	ENST00000615093	CDC42BPG	Q6DT37	1551 aa		31.78	■■■□□ 2.68
RAB43-208	ENST00000615093	C14orf93	Q9H972	538 aa	Known RBP	31.78	■■■□□ 2.68
RAB43-208	ENST00000615093	LAMC1	P11047	1609 aa		31.77	■■■□□ 2.68
RAB43-208	ENST00000615093	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.76	■■■□□ 2.68
RAB43-208	ENST00000615093	POTEA	Q6S8J7	498 aa		31.76	■■■□□ 2.67

Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms