RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 HDGFP51858 240 aaKnown RBP18.57■□□□□ 0.56
PDLIM2-218ENST00000614502 ROBO1Q9Y6N7 1651 aa18.57■□□□□ 0.56
PDLIM2-218ENST00000614502 NWD1Q149M9 1564 aa18.56■□□□□ 0.56
PDLIM2-218ENST00000614502 KCNA6P17658 529 aa18.56■□□□□ 0.56
PDLIM2-218ENST00000614502 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-218ENST00000614502 IQGAP3Q86VI3 1631 aa18.55■□□□□ 0.56
PDLIM2-218ENST00000614502 FAM135BQ49AJ0 1406 aa18.54■□□□□ 0.56
PDLIM2-218ENST00000614502 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
PDLIM2-218ENST00000614502 CHD2O14647 1828 aaKnown RBP18.53■□□□□ 0.56
PDLIM2-218ENST00000614502 E9PCH4 1651 aa18.53■□□□□ 0.56
PDLIM2-218ENST00000614502 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
PDLIM2-218ENST00000614502 ZFYVE9O95405 1425 aa18.52■□□□□ 0.56
PDLIM2-218ENST00000614502 NKTRP30414 1462 aaKnown RBP18.52■□□□□ 0.55
PDLIM2-218ENST00000614502 ITGAEP38570 1179 aa18.5■□□□□ 0.55
PDLIM2-218ENST00000614502 BCANQ96GW7 911 aa18.5■□□□□ 0.55
PDLIM2-218ENST00000614502 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
PDLIM2-218ENST00000614502 NUP155O75694 1391 aa18.48■□□□□ 0.55
PDLIM2-218ENST00000614502 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.48■□□□□ 0.55
PDLIM2-218ENST00000614502 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
PDLIM2-218ENST00000614502 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-218ENST00000614502 PPARGC1BQ86YN6 1023 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-218ENST00000614502 PHLPP1O60346 1717 aa18.46■□□□□ 0.55
PDLIM2-218ENST00000614502 MSH6P52701 1360 aa18.44■□□□□ 0.54
PDLIM2-218ENST00000614502 RRBP1Q9P2E9 1410 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-218ENST00000614502 CHGAP10645 457 aaKnown RBP18.44■□□□□ 0.54
PDLIM2-218ENST00000614502 NUTM2DQ5VT03 806 aaPredicted RBP18.44■□□□□ 0.54
PDLIM2-218ENST00000614502 SPHKAPQ2M3C7 1700 aa18.43■□□□□ 0.54
PDLIM2-218ENST00000614502 POTEAQ6S8J7 498 aa18.42■□□□□ 0.54
PDLIM2-218ENST00000614502 ADAMTS13Q76LX8 1427 aa18.41■□□□□ 0.54
PDLIM2-218ENST00000614502 SLAIN2Q9P270 581 aa18.41■□□□□ 0.54
PDLIM2-218ENST00000614502 DIP2AQ14689 1571 aa18.41■□□□□ 0.54
PDLIM2-218ENST00000614502 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
PDLIM2-218ENST00000614502 COL16A1Q07092 1604 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-218ENST00000614502 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-218ENST00000614502 SETD1AO15047 1707 aaKnown RBP18.38■□□□□ 0.53
PDLIM2-218ENST00000614502 PIK3R4Q99570 1358 aa18.37■□□□□ 0.53
PDLIM2-218ENST00000614502 NCOA3Q9Y6Q9 1424 aa18.36■□□□□ 0.53
PDLIM2-218ENST00000614502 KIF1BO60333 1816 aa18.34■□□□□ 0.53
PDLIM2-218ENST00000614502 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
PDLIM2-218ENST00000614502 TRPM2O94759 1503 aa18.33■□□□□ 0.53
PDLIM2-218ENST00000614502 NAIPQ13075 1403 aa18.33■□□□□ 0.53
PDLIM2-218ENST00000614502 PTPRUQ92729 1446 aa18.33■□□□□ 0.53
PDLIM2-218ENST00000614502 JCADQ9P266 1359 aa18.33■□□□□ 0.53
PDLIM2-218ENST00000614502 LRP6O75581 1613 aa18.32■□□□□ 0.52
PDLIM2-218ENST00000614502 C14orf37Q86TY3 774 aa18.32■□□□□ 0.52
PDLIM2-218ENST00000614502 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
PDLIM2-218ENST00000614502 HFM1A2PYH4 1435 aa18.3■□□□□ 0.52
PDLIM2-218ENST00000614502 AHDC1Q5TGY3 1603 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-218ENST00000614502 XRN1Q8IZH2 1706 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-218ENST00000614502 SHPRHQ149N8 1683 aa18.28■□□□□ 0.52
PDLIM2-218ENST00000614502 C19orf44Q9H6X5 657 aa18.28■□□□□ 0.52
PDLIM2-218ENST00000614502 AMOTL2Q9Y2J4 779 aa18.28■□□□□ 0.52
PDLIM2-218ENST00000614502 CLTCL1P53675 1640 aa18.27■□□□□ 0.52
PDLIM2-218ENST00000614502 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
PDLIM2-218ENST00000614502 CADPS2Q86UW7 1296 aa18.27■□□□□ 0.52
PDLIM2-218ENST00000614502 TRIM52Q96A61 297 aa18.27■□□□□ 0.52
PDLIM2-218ENST00000614502 ATF3P18847 181 aa18.26■□□□□ 0.51
PDLIM2-218ENST00000614502 BRINP3Q76B58 766 aa18.24■□□□□ 0.51
PDLIM2-218ENST00000614502 METP08581 1390 aa18.23■□□□□ 0.51
PDLIM2-218ENST00000614502 SPATA31A6Q5VVP1 1343 aa18.23■□□□□ 0.51
PDLIM2-218ENST00000614502 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
PDLIM2-218ENST00000614502 ASXL1Q8IXJ9 1541 aa18.22■□□□□ 0.51
PDLIM2-218ENST00000614502 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-218ENST00000614502 ACIN1Q9UKV3 1341 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-218ENST00000614502 NALCNQ8IZF0 1738 aa18.2■□□□□ 0.5
PDLIM2-218ENST00000614502 NHSL1Q5SYE7 1610 aa18.2■□□□□ 0.5
PDLIM2-218ENST00000614502 MEX3CQ5U5Q3 659 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-218ENST00000614502 DCCP43146 1447 aa18.2■□□□□ 0.5
PDLIM2-218ENST00000614502 MST1RQ04912 1400 aa18.2■□□□□ 0.5
PDLIM2-218ENST00000614502 VGFO15240 615 aaPredicted RBP18.19■□□□□ 0.5
PDLIM2-218ENST00000614502 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
PDLIM2-218ENST00000614502 NUTM2BA6NNL0 878 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-218ENST00000614502 NUTM2EB1AL46 878 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-218ENST00000614502 NUTM2AQ8IVF1 878 aaPredicted RBP18.16■□□□□ 0.5
PDLIM2-218ENST00000614502 DDX17Q92841 729 aaKnown RBP18.16■□□□□ 0.5
PDLIM2-218ENST00000614502 PPLO60437 1756 aa18.15■□□□□ 0.5
PDLIM2-218ENST00000614502 ADGRL3Q9HAR2 1447 aa18.15■□□□□ 0.5
PDLIM2-218ENST00000614502 ZNF772Q68DY9 489 aaPredicted RBP18.14■□□□□ 0.49
PDLIM2-218ENST00000614502 SETD5Q9C0A6 1442 aa18.14■□□□□ 0.49
PDLIM2-218ENST00000614502 CCDC144AA2RUR9 1427 aa18.1■□□□□ 0.49
PDLIM2-218ENST00000614502 AFF2P51816 1311 aa18.09■□□□□ 0.49
PDLIM2-218ENST00000614502 UPF1Q92900 1129 aaKnown RBP eCLIP18.09■□□□□ 0.49
PDLIM2-218ENST00000614502 PTCH1Q13635 1447 aa18.08■□□□□ 0.49
PDLIM2-218ENST00000614502 PNPLA6Q8IY17 1366 aa18.08■□□□□ 0.49
PDLIM2-218ENST00000614502 RXRBP28702 533 aa18.08■□□□□ 0.48
PDLIM2-218ENST00000614502 C1orf167Q5SNV9 1468 aa18.07■□□□□ 0.48
PDLIM2-218ENST00000614502 ROBO2Q9HCK4 1378 aa18.07■□□□□ 0.48
PDLIM2-218ENST00000614502 MPHOSPH9Q99550 1183 aa18.07■□□□□ 0.48
PDLIM2-218ENST00000614502 PRAG1Q86YV5 1406 aa18.06■□□□□ 0.48
PDLIM2-218ENST00000614502 LAMC1P11047 1609 aa18.06■□□□□ 0.48
PDLIM2-218ENST00000614502 LRRC59Q96AG4 307 aaKnown RBP18.06■□□□□ 0.48
PDLIM2-218ENST00000614502 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
PDLIM2-218ENST00000614502 IFT172Q9UG01 1749 aa18.04■□□□□ 0.48
PDLIM2-218ENST00000614502 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
PDLIM2-218ENST00000614502 C8orf37Q96NL8 207 aa18.04■□□□□ 0.48
PDLIM2-218ENST00000614502 FOXD1Q16676 465 aa18.03■□□□□ 0.48
PDLIM2-218ENST00000614502 ORAI2Q96SN7 254 aa18.03■□□□□ 0.48
PDLIM2-218ENST00000614502 RGS12O14924 1447 aa18.02■□□□□ 0.48
PDLIM2-218ENST00000614502 SPATA31E1Q6ZUB1 1445 aa18■□□□□ 0.47
PDLIM2-218ENST00000614502 ADAMTS2O95450 1211 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms