RNA–Protein interactions for RNA: ENST00000613947.1

CCL4-201, Transcript of C-C motif chemokine ligand 4, humanhuman

Gene CCL4, Length 1,774 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4-201ENST00000613947 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
CCL4-201ENST00000613947 RIMS2Q9UQ26 1411 aa18.78■□□□□ 0.6
CCL4-201ENST00000613947 KIF1BO60333 1816 aa18.78■□□□□ 0.6
CCL4-201ENST00000613947 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
CCL4-201ENST00000613947 MED14O60244 1454 aa18.77■□□□□ 0.6
CCL4-201ENST00000613947 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
CCL4-201ENST00000613947 NPHP4O75161 1426 aaPredicted RBP18.76■□□□□ 0.59
CCL4-201ENST00000613947 DHX57Q6P158 1386 aaKnown RBP18.76■□□□□ 0.59
CCL4-201ENST00000613947 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
CCL4-201ENST00000613947 RGL3Q3MIN7 710 aa18.75■□□□□ 0.59
CCL4-201ENST00000613947 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.75■□□□□ 0.59
CCL4-201ENST00000613947 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
CCL4-201ENST00000613947 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
CCL4-201ENST00000613947 IQGAP1P46940 1657 aa18.71■□□□□ 0.59
CCL4-201ENST00000613947 BCANQ96GW7 911 aa18.7■□□□□ 0.58
CCL4-201ENST00000613947 RPGRIP1LQ68CZ1 1315 aa18.7■□□□□ 0.58
CCL4-201ENST00000613947 NEXMIFQ5QGS0 1516 aa18.7■□□□□ 0.58
CCL4-201ENST00000613947 SLC26A8Q96RN1 970 aa18.69■□□□□ 0.58
CCL4-201ENST00000613947 PLEKHG1Q9ULL1 1385 aa18.69■□□□□ 0.58
CCL4-201ENST00000613947 ZNF335Q9H4Z2 1342 aaPredicted RBP18.67■□□□□ 0.58
CCL4-201ENST00000613947 VGFO15240 615 aaPredicted RBP18.66■□□□□ 0.58
CCL4-201ENST00000613947 SIN3AQ96ST3 1273 aa18.66■□□□□ 0.58
CCL4-201ENST00000613947 PPLO60437 1756 aa18.63■□□□□ 0.57
CCL4-201ENST00000613947 ADAMTS13Q76LX8 1427 aa18.63■□□□□ 0.57
CCL4-201ENST00000613947 ADGRF5Q8IZF2 1346 aa18.62■□□□□ 0.57
CCL4-201ENST00000613947 NEUROD1Q13562 356 aa18.62■□□□□ 0.57
CCL4-201ENST00000613947 TBX22Q9Y458 520 aa18.62■□□□□ 0.57
CCL4-201ENST00000613947 DCAF11Q8TEB1 546 aa18.6■□□□□ 0.57
CCL4-201ENST00000613947 IFT172Q9UG01 1749 aa18.59■□□□□ 0.57
CCL4-201ENST00000613947 LTBP4Q8N2S1 1624 aa18.59■□□□□ 0.57
CCL4-201ENST00000613947 NRXN3Q9Y4C0 1643 aa18.59■□□□□ 0.57
CCL4-201ENST00000613947 SETBP1Q9Y6X0 1596 aa18.58■□□□□ 0.57
CCL4-201ENST00000613947 MYT1Q01538 1121 aa18.58■□□□□ 0.57
CCL4-201ENST00000613947 KDM2AQ9Y2K7 1162 aa18.58■□□□□ 0.57
CCL4-201ENST00000613947 KCNA6P17658 529 aa18.56■□□□□ 0.56
CCL4-201ENST00000613947 STRCP1A6NGW2 1772 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 DIP2AQ14689 1571 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 METP08581 1390 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 MYOM2P54296 1465 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 L3MBTL2Q969R5 705 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 PIK3C2GO75747 1445 aa18.54■□□□□ 0.56
CCL4-201ENST00000613947 NRXN1Q9ULB1 1477 aa18.53■□□□□ 0.56
CCL4-201ENST00000613947 ALKQ9UM73 1620 aa18.53■□□□□ 0.56
CCL4-201ENST00000613947 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
CCL4-201ENST00000613947 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
CCL4-201ENST00000613947 PIK3R4Q99570 1358 aa18.52■□□□□ 0.56
CCL4-201ENST00000613947 CCER1Q8TC90 406 aaPredicted RBP18.51■□□□□ 0.55
CCL4-201ENST00000613947 PTPRUQ92729 1446 aa18.51■□□□□ 0.55
CCL4-201ENST00000613947 CPS1P31327 1500 aa18.51■□□□□ 0.55
CCL4-201ENST00000613947 CHD2O14647 1828 aaKnown RBP18.51■□□□□ 0.55
CCL4-201ENST00000613947 CFAP70Q5T0N1 1121 aa18.5■□□□□ 0.55
CCL4-201ENST00000613947 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
CCL4-201ENST00000613947 AMOTL2Q9Y2J4 779 aa18.5■□□□□ 0.55
CCL4-201ENST00000613947 SETD1AO15047 1707 aaKnown RBP18.49■□□□□ 0.55
CCL4-201ENST00000613947 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
CCL4-201ENST00000613947 LRRC7Q96NW7 1537 aa18.48■□□□□ 0.55
CCL4-201ENST00000613947 CLSPNQ9HAW4 1339 aa18.48■□□□□ 0.55
CCL4-201ENST00000613947 PROSER2Q86WR7 435 aaPredicted RBP18.47■□□□□ 0.55
CCL4-201ENST00000613947 RBM33Q96EV2 1170 aaKnown RBP18.47■□□□□ 0.55
CCL4-201ENST00000613947 NWD1Q149M9 1564 aa18.47■□□□□ 0.55
CCL4-201ENST00000613947 TONSLQ96HA7 1378 aa18.45■□□□□ 0.54
CCL4-201ENST00000613947 NKTRP30414 1462 aaKnown RBP18.45■□□□□ 0.54
CCL4-201ENST00000613947 TMEM94Q12767 1356 aa18.44■□□□□ 0.54
CCL4-201ENST00000613947 PRAG1Q86YV5 1406 aa18.43■□□□□ 0.54
CCL4-201ENST00000613947 ASXL1Q8IXJ9 1541 aa18.43■□□□□ 0.54
CCL4-201ENST00000613947 STK26Q9P289 416 aa18.42■□□□□ 0.54
CCL4-201ENST00000613947 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
CCL4-201ENST00000613947 IQSEC2Q5JU85 1478 aa18.41■□□□□ 0.54
CCL4-201ENST00000613947 XIRP1Q702N8 1843 aaKnown RBP18.4■□□□□ 0.54
CCL4-201ENST00000613947 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
CCL4-201ENST00000613947 LAMC1P11047 1609 aa18.4■□□□□ 0.54
CCL4-201ENST00000613947 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.54
CCL4-201ENST00000613947 ROBO2Q9HCK4 1378 aa18.39■□□□□ 0.53
CCL4-201ENST00000613947 ABCC11Q96J66 1382 aa18.38■□□□□ 0.53
CCL4-201ENST00000613947 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
CCL4-201ENST00000613947 ADGRB1O14514 1584 aa18.38■□□□□ 0.53
CCL4-201ENST00000613947 NBPF8Q3BBV2 869 aa18.37■□□□□ 0.53
CCL4-201ENST00000613947 PTCH1Q13635 1447 aa18.37■□□□□ 0.53
CCL4-201ENST00000613947 C14orf37Q86TY3 774 aa18.37■□□□□ 0.53
CCL4-201ENST00000613947 TECPR2O15040 1411 aa18.36■□□□□ 0.53
CCL4-201ENST00000613947 UBAP1LF5GYI3 381 aa18.35■□□□□ 0.53
CCL4-201ENST00000613947 WAPLQ7Z5K2 1190 aa18.35■□□□□ 0.53
CCL4-201ENST00000613947 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
CCL4-201ENST00000613947 TRAK1Q9UPV9 953 aa18.35■□□□□ 0.53
CCL4-201ENST00000613947 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
CCL4-201ENST00000613947 KIAA1210Q9ULL0 1709 aa18.33■□□□□ 0.53
CCL4-201ENST00000613947 FBXO41Q8TF61 875 aa18.33■□□□□ 0.53
CCL4-201ENST00000613947 C19orf44Q9H6X5 657 aa18.33■□□□□ 0.53
CCL4-201ENST00000613947 MSH6P52701 1360 aa18.33■□□□□ 0.52
CCL4-201ENST00000613947 TOM1O60784 492 aa18.32■□□□□ 0.52
CCL4-201ENST00000613947 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
CCL4-201ENST00000613947 PLEKHH1Q9ULM0 1364 aa18.32■□□□□ 0.52
CCL4-201ENST00000613947 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
CCL4-201ENST00000613947 PRAM1Q96QH2 718 aa18.3■□□□□ 0.52
CCL4-201ENST00000613947 FAM135BQ49AJ0 1406 aa18.3■□□□□ 0.52
CCL4-201ENST00000613947 TRPM1Q7Z4N2 1603 aa18.29■□□□□ 0.52
CCL4-201ENST00000613947 ROCK2O75116 1388 aaKnown RBP18.29■□□□□ 0.52
CCL4-201ENST00000613947 SAFB2Q14151 953 aaKnown RBP eCLIP18.29■□□□□ 0.52
CCL4-201ENST00000613947 ADGRL3Q9HAR2 1447 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms