RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 PPLO60437 1756 aa18.99■□□□□ 0.63
SRGAP2C-204ENST00000613462 IFT172Q9UG01 1749 aa18.99■□□□□ 0.63
SRGAP2C-204ENST00000613462 IQGAP1P46940 1657 aa18.98■□□□□ 0.63
SRGAP2C-204ENST00000613462 SCAF11Q99590 1463 aaKnown RBP18.97■□□□□ 0.63
SRGAP2C-204ENST00000613462 CHGAP10645 457 aaKnown RBP18.97■□□□□ 0.63
SRGAP2C-204ENST00000613462 ZFYVE9O95405 1425 aa18.96■□□□□ 0.63
SRGAP2C-204ENST00000613462 SPATA31E1Q6ZUB1 1445 aa18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 HDGFP51858 240 aaKnown RBP18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 ANKLE2Q86XL3 938 aa18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 EID1Q9Y6B2 187 aa18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 MED14O60244 1454 aa18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
SRGAP2C-204ENST00000613462 RIMS2Q9UQ26 1411 aa18.94■□□□□ 0.62
SRGAP2C-204ENST00000613462 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.92■□□□□ 0.62
SRGAP2C-204ENST00000613462 RPGRIP1LQ68CZ1 1315 aa18.92■□□□□ 0.62
SRGAP2C-204ENST00000613462 ZNF326Q5BKZ1 582 aaKnown RBP18.91■□□□□ 0.62
SRGAP2C-204ENST00000613462 TXNDC2Q86VQ3 553 aa18.9■□□□□ 0.62
SRGAP2C-204ENST00000613462 NPHP4O75161 1426 aaPredicted RBP18.89■□□□□ 0.61
SRGAP2C-204ENST00000613462 CLSPNQ9HAW4 1339 aa18.88■□□□□ 0.61
SRGAP2C-204ENST00000613462 NCKAP5LQ9HCH0 1330 aa18.88■□□□□ 0.61
SRGAP2C-204ENST00000613462 DIP2AQ14689 1571 aa18.88■□□□□ 0.61
SRGAP2C-204ENST00000613462 PPP1R15AO75807 674 aaPredicted RBP18.87■□□□□ 0.61
SRGAP2C-204ENST00000613462 LTKP29376 864 aa18.87■□□□□ 0.61
SRGAP2C-204ENST00000613462 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
SRGAP2C-204ENST00000613462 SETBP1Q9Y6X0 1596 aa18.87■□□□□ 0.61
SRGAP2C-204ENST00000613462 MYOM2P54296 1465 aa18.85■□□□□ 0.61
SRGAP2C-204ENST00000613462 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
SRGAP2C-204ENST00000613462 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
SRGAP2C-204ENST00000613462 LAMC1P11047 1609 aa18.83■□□□□ 0.61
SRGAP2C-204ENST00000613462 NRXN3Q9Y4C0 1643 aa18.83■□□□□ 0.61
SRGAP2C-204ENST00000613462 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
SRGAP2C-204ENST00000613462 STAC3Q96MF2 364 aa18.83■□□□□ 0.6
SRGAP2C-204ENST00000613462 SETD1AO15047 1707 aaKnown RBP18.8■□□□□ 0.6
SRGAP2C-204ENST00000613462 NRXN1Q9ULB1 1477 aa18.79■□□□□ 0.6
SRGAP2C-204ENST00000613462 CCER1Q8TC90 406 aaPredicted RBP18.79■□□□□ 0.6
SRGAP2C-204ENST00000613462 CHD2O14647 1828 aaKnown RBP18.78■□□□□ 0.6
SRGAP2C-204ENST00000613462 MED1Q15648 1581 aaPredicted RBP18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 PIK3C2GO75747 1445 aa18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 UBAP1LF5GYI3 381 aa18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 NUTM2DQ5VT03 806 aaPredicted RBP18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 BCANQ96GW7 911 aa18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 SIN3AQ96ST3 1273 aa18.77■□□□□ 0.6
SRGAP2C-204ENST00000613462 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
SRGAP2C-204ENST00000613462 ALKQ9UM73 1620 aa18.76■□□□□ 0.59
SRGAP2C-204ENST00000613462 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
SRGAP2C-204ENST00000613462 KIAA1210Q9ULL0 1709 aa18.76■□□□□ 0.59
SRGAP2C-204ENST00000613462 NWD1Q149M9 1564 aa18.75■□□□□ 0.59
SRGAP2C-204ENST00000613462 TONSLQ96HA7 1378 aa18.74■□□□□ 0.59
SRGAP2C-204ENST00000613462 PIK3R4Q99570 1358 aa18.74■□□□□ 0.59
SRGAP2C-204ENST00000613462 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
SRGAP2C-204ENST00000613462 TBX22Q9Y458 520 aa18.73■□□□□ 0.59
SRGAP2C-204ENST00000613462 STRCP1A6NGW2 1772 aa18.73■□□□□ 0.59
SRGAP2C-204ENST00000613462 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
SRGAP2C-204ENST00000613462 CPS1P31327 1500 aa18.71■□□□□ 0.59
SRGAP2C-204ENST00000613462 XRN1Q8IZH2 1706 aaKnown RBP18.71■□□□□ 0.59
SRGAP2C-204ENST00000613462 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
SRGAP2C-204ENST00000613462 L3MBTL2Q969R5 705 aa18.69■□□□□ 0.58
SRGAP2C-204ENST00000613462 TIMELESSQ9UNS1 1208 aa18.69■□□□□ 0.58
SRGAP2C-204ENST00000613462 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
SRGAP2C-204ENST00000613462 KNDC1Q76NI1 1749 aa18.69■□□□□ 0.58
SRGAP2C-204ENST00000613462 PRAG1Q86YV5 1406 aa18.68■□□□□ 0.58
SRGAP2C-204ENST00000613462 HSPA1LP34931 641 aa18.68■□□□□ 0.58
SRGAP2C-204ENST00000613462 KDM2AQ9Y2K7 1162 aa18.67■□□□□ 0.58
SRGAP2C-204ENST00000613462 TRPM1Q7Z4N2 1603 aa18.67■□□□□ 0.58
SRGAP2C-204ENST00000613462 SENP3Q9H4L4 574 aaPredicted RBP18.65■□□□□ 0.58
SRGAP2C-204ENST00000613462 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
SRGAP2C-204ENST00000613462 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.58
SRGAP2C-204ENST00000613462 KCNA6P17658 529 aa18.64■□□□□ 0.57
SRGAP2C-204ENST00000613462 METP08581 1390 aa18.64■□□□□ 0.57
SRGAP2C-204ENST00000613462 XIRP1Q702N8 1843 aaKnown RBP18.63■□□□□ 0.57
SRGAP2C-204ENST00000613462 ADGRB1O14514 1584 aa18.62■□□□□ 0.57
SRGAP2C-204ENST00000613462 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
SRGAP2C-204ENST00000613462 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
SRGAP2C-204ENST00000613462 TECPR2O15040 1411 aa18.59■□□□□ 0.57
SRGAP2C-204ENST00000613462 CFAP70Q5T0N1 1121 aa18.59■□□□□ 0.57
SRGAP2C-204ENST00000613462 LRRC7Q96NW7 1537 aa18.59■□□□□ 0.57
SRGAP2C-204ENST00000613462 YTHDC2Q9H6S0 1430 aaKnown RBP18.58■□□□□ 0.57
SRGAP2C-204ENST00000613462 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.57
SRGAP2C-204ENST00000613462 ARHGEF28Q8N1W1 1705 aaKnown RBP18.57■□□□□ 0.56
SRGAP2C-204ENST00000613462 AMOTL2Q9Y2J4 779 aa18.57■□□□□ 0.56
SRGAP2C-204ENST00000613462 DLC1Q96QB1 1528 aa18.57■□□□□ 0.56
SRGAP2C-204ENST00000613462 PIP4K2BP78356 416 aa18.56■□□□□ 0.56
SRGAP2C-204ENST00000613462 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
SRGAP2C-204ENST00000613462 NCOA3Q9Y6Q9 1424 aa18.56■□□□□ 0.56
SRGAP2C-204ENST00000613462 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
SRGAP2C-204ENST00000613462 TMEM132EQ6IEE7 984 aa18.53■□□□□ 0.56
SRGAP2C-204ENST00000613462 NALCNQ8IZF0 1738 aa18.53■□□□□ 0.56
SRGAP2C-204ENST00000613462 FAM135BQ49AJ0 1406 aa18.52■□□□□ 0.56
SRGAP2C-204ENST00000613462 TOM1O60784 492 aa18.52■□□□□ 0.56
SRGAP2C-204ENST00000613462 PROSER2Q86WR7 435 aaPredicted RBP18.52■□□□□ 0.56
SRGAP2C-204ENST00000613462 ROCK2O75116 1388 aaKnown RBP18.52■□□□□ 0.55
SRGAP2C-204ENST00000613462 TMEM94Q12767 1356 aa18.51■□□□□ 0.55
SRGAP2C-204ENST00000613462 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
SRGAP2C-204ENST00000613462 SCAF1Q9H7N4 1312 aaKnown RBP18.5■□□□□ 0.55
SRGAP2C-204ENST00000613462 NBPF8Q3BBV2 869 aa18.5■□□□□ 0.55
SRGAP2C-204ENST00000613462 SIRT1Q96EB6 747 aa18.5■□□□□ 0.55
SRGAP2C-204ENST00000613462 ROBO2Q9HCK4 1378 aa18.5■□□□□ 0.55
SRGAP2C-204ENST00000613462 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.49■□□□□ 0.55
SRGAP2C-204ENST00000613462 STK26Q9P289 416 aa18.48■□□□□ 0.55
SRGAP2C-204ENST00000613462 QRICH2Q9H0J4 1663 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms