RNA–Protein interactions for RNA: ENST00000612845.4

LTBP4-234, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 4

Gene LTBP4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-234ENST00000612845 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
LTBP4-234ENST00000612845 SCAF1Q9H7N4 1312 aaKnown RBP22.36■■□□□ 1.17
LTBP4-234ENST00000612845 HDGFP51858 240 aaKnown RBP22.36■■□□□ 1.17
LTBP4-234ENST00000612845 SPHKAPQ2M3C7 1700 aa22.35■■□□□ 1.17
LTBP4-234ENST00000612845 BCANQ96GW7 911 aa22.35■■□□□ 1.17
LTBP4-234ENST00000612845 SLC26A8Q96RN1 970 aa22.35■■□□□ 1.17
LTBP4-234ENST00000612845 PIP4K2BP78356 416 aa22.34■■□□□ 1.17
LTBP4-234ENST00000612845 ACIN1Q9UKV3 1341 aaKnown RBP22.33■■□□□ 1.17
LTBP4-234ENST00000612845 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.33■■□□□ 1.17
LTBP4-234ENST00000612845 ALKQ9UM73 1620 aa22.31■■□□□ 1.16
LTBP4-234ENST00000612845 NWD1Q149M9 1564 aa22.31■■□□□ 1.16
LTBP4-234ENST00000612845 KCNA6P17658 529 aa22.31■■□□□ 1.16
LTBP4-234ENST00000612845 TRPM2O94759 1503 aa22.31■■□□□ 1.16
LTBP4-234ENST00000612845 NKTRP30414 1462 aaKnown RBP22.3■■□□□ 1.16
LTBP4-234ENST00000612845 SETD5Q9C0A6 1442 aa22.29■■□□□ 1.16
LTBP4-234ENST00000612845 SLC4A1APQ9BWU0 796 aaKnown RBP22.28■■□□□ 1.16
LTBP4-234ENST00000612845 SENP3Q9H4L4 574 aaPredicted RBP22.27■■□□□ 1.16
LTBP4-234ENST00000612845 TMEM94Q12767 1356 aa22.26■■□□□ 1.15
LTBP4-234ENST00000612845 DIP2AQ14689 1571 aa22.26■■□□□ 1.15
LTBP4-234ENST00000612845 CLTCL1P53675 1640 aa22.25■■□□□ 1.15
LTBP4-234ENST00000612845 NUTM2DQ5VT03 806 aaPredicted RBP22.25■■□□□ 1.15
LTBP4-234ENST00000612845 XIRP1Q702N8 1843 aaKnown RBP22.24■■□□□ 1.15
LTBP4-234ENST00000612845 DISP3Q9P2K9 1392 aa22.24■■□□□ 1.15
LTBP4-234ENST00000612845 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
LTBP4-234ENST00000612845 HSPA1LP34931 641 aa22.23■■□□□ 1.15
LTBP4-234ENST00000612845 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
LTBP4-234ENST00000612845 ZNF326Q5BKZ1 582 aaKnown RBP22.22■■□□□ 1.15
LTBP4-234ENST00000612845 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
LTBP4-234ENST00000612845 PIK3R4Q99570 1358 aa22.19■■□□□ 1.14
LTBP4-234ENST00000612845 CHD2O14647 1828 aaKnown RBP22.18■■□□□ 1.14
LTBP4-234ENST00000612845 RAB3GAP2Q9H2M9 1393 aa22.18■■□□□ 1.14
LTBP4-234ENST00000612845 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
LTBP4-234ENST00000612845 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
LTBP4-234ENST00000612845 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
LTBP4-234ENST00000612845 MSH6P52701 1360 aa22.16■■□□□ 1.14
LTBP4-234ENST00000612845 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
LTBP4-234ENST00000612845 KIF1BO60333 1816 aa22.15■■□□□ 1.14
LTBP4-234ENST00000612845 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
LTBP4-234ENST00000612845 FAM135BQ49AJ0 1406 aa22.11■■□□□ 1.13
LTBP4-234ENST00000612845 NCOA3Q9Y6Q9 1424 aa22.11■■□□□ 1.13
LTBP4-234ENST00000612845 HRCP23327 699 aa22.1■■□□□ 1.13
LTBP4-234ENST00000612845 PTPRUQ92729 1446 aa22.09■■□□□ 1.13
LTBP4-234ENST00000612845 FOXD1Q16676 465 aa22.09■■□□□ 1.13
LTBP4-234ENST00000612845 MED1Q15648 1581 aaPredicted RBP22.08■■□□□ 1.12
LTBP4-234ENST00000612845 CCDC144AA2RUR9 1427 aa22.07■■□□□ 1.12
LTBP4-234ENST00000612845 XRN1Q8IZH2 1706 aaKnown RBP22.07■■□□□ 1.12
LTBP4-234ENST00000612845 C14orf37Q86TY3 774 aa22.07■■□□□ 1.12
LTBP4-234ENST00000612845 AMOTL2Q9Y2J4 779 aa22.07■■□□□ 1.12
LTBP4-234ENST00000612845 RPGRIP1LQ68CZ1 1315 aa22.06■■□□□ 1.12
LTBP4-234ENST00000612845 ROBO1Q9Y6N7 1651 aa22.05■■□□□ 1.12
LTBP4-234ENST00000612845 METP08581 1390 aa22.05■■□□□ 1.12
LTBP4-234ENST00000612845 VGFO15240 615 aaPredicted RBP22.03■■□□□ 1.12
LTBP4-234ENST00000612845 SLAIN2Q9P270 581 aa22.02■■□□□ 1.12
LTBP4-234ENST00000612845 TRIM26Q12899 539 aaPredicted RBP22.01■■□□□ 1.11
LTBP4-234ENST00000612845 ILDR2Q71H61 639 aa22■■□□□ 1.11
LTBP4-234ENST00000612845 CADPS2Q86UW7 1296 aa22■■□□□ 1.11
LTBP4-234ENST00000612845 C19orf44Q9H6X5 657 aa22■■□□□ 1.11
LTBP4-234ENST00000612845 PPLO60437 1756 aa21.99■■□□□ 1.11
LTBP4-234ENST00000612845 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.99■■□□□ 1.11
LTBP4-234ENST00000612845 DCCP43146 1447 aa21.98■■□□□ 1.11
LTBP4-234ENST00000612845 SPATA31E1Q6ZUB1 1445 aa21.98■■□□□ 1.11
LTBP4-234ENST00000612845 ATF3P18847 181 aa21.98■■□□□ 1.11
LTBP4-234ENST00000612845 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
LTBP4-234ENST00000612845 PTCH1Q13635 1447 aa21.96■■□□□ 1.11
LTBP4-234ENST00000612845 ANKRD30BQ9BXX2 1392 aa21.94■■□□□ 1.1
LTBP4-234ENST00000612845 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
LTBP4-234ENST00000612845 PHF23Q9BUL5 403 aaPredicted RBP21.93■■□□□ 1.1
LTBP4-234ENST00000612845 ADGRL3Q9HAR2 1447 aa21.93■■□□□ 1.1
LTBP4-234ENST00000612845 RGL3Q3MIN7 710 aa21.92■■□□□ 1.1
LTBP4-234ENST00000612845 PHLPP1O60346 1717 aa21.91■■□□□ 1.1
LTBP4-234ENST00000612845 IFT172Q9UG01 1749 aa21.9■■□□□ 1.1
LTBP4-234ENST00000612845 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
LTBP4-234ENST00000612845 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
LTBP4-234ENST00000612845 NALCNQ8IZF0 1738 aa21.88■■□□□ 1.09
LTBP4-234ENST00000612845 MST1RQ04912 1400 aa21.88■■□□□ 1.09
LTBP4-234ENST00000612845 AHDC1Q5TGY3 1603 aaPredicted RBP21.88■■□□□ 1.09
LTBP4-234ENST00000612845 COL16A1Q07092 1604 aaPredicted RBP21.87■■□□□ 1.09
LTBP4-234ENST00000612845 PIK3C2GO75747 1445 aa21.86■■□□□ 1.09
LTBP4-234ENST00000612845 JCADQ9P266 1359 aa21.86■■□□□ 1.09
LTBP4-234ENST00000612845 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
LTBP4-234ENST00000612845 BRINP3Q76B58 766 aa21.85■■□□□ 1.09
LTBP4-234ENST00000612845 SOCS7O14512 581 aa21.84■■□□□ 1.09
LTBP4-234ENST00000612845 MYOM2P54296 1465 aa21.83■■□□□ 1.08
LTBP4-234ENST00000612845 TECPR2O15040 1411 aa21.8■■□□□ 1.08
LTBP4-234ENST00000612845 NRXN1Q9ULB1 1477 aa21.8■■□□□ 1.08
LTBP4-234ENST00000612845 LRPPRCP42704 1394 aaKnown RBP21.8■■□□□ 1.08
LTBP4-234ENST00000612845 C1orf167Q5SNV9 1468 aa21.78■■□□□ 1.08
LTBP4-234ENST00000612845 LAMC1P11047 1609 aa21.77■■□□□ 1.07
LTBP4-234ENST00000612845 CDC42BPGQ6DT37 1551 aa21.76■■□□□ 1.07
LTBP4-234ENST00000612845 KNDC1Q76NI1 1749 aa21.76■■□□□ 1.07
LTBP4-234ENST00000612845 STK26Q9P289 416 aa21.76■■□□□ 1.07
LTBP4-234ENST00000612845 NHSL1Q5SYE7 1610 aa21.76■■□□□ 1.07
LTBP4-234ENST00000612845 ABCC11Q96J66 1382 aa21.75■■□□□ 1.07
LTBP4-234ENST00000612845 SHPRHQ149N8 1683 aa21.75■■□□□ 1.07
LTBP4-234ENST00000612845 SPATA31A6Q5VVP1 1343 aa21.75■■□□□ 1.07
LTBP4-234ENST00000612845 YTHDC2Q9H6S0 1430 aaKnown RBP21.74■■□□□ 1.07
LTBP4-234ENST00000612845 TMEM132EQ6IEE7 984 aa21.74■■□□□ 1.07
LTBP4-234ENST00000612845 C14orf93Q9H972 538 aaKnown RBP21.73■■□□□ 1.07
LTBP4-234ENST00000612845 STAC3Q96MF2 364 aa21.72■■□□□ 1.07
LTBP4-234ENST00000612845 RGS17Q9UGC6 210 aaPredicted RBP21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms