RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 IQGAP3Q86VI3 1631 aa27.26■■□□□ 1.95
SSBP1-215ENST00000612337 TMEM94Q12767 1356 aa27.25■■□□□ 1.95
SSBP1-215ENST00000612337 NWD1Q149M9 1564 aa27.23■■□□□ 1.95
SSBP1-215ENST00000612337 RIMS2Q9UQ26 1411 aa27.23■■□□□ 1.95
SSBP1-215ENST00000612337 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
SSBP1-215ENST00000612337 HDGFP51858 240 aaKnown RBP27.22■■□□□ 1.95
SSBP1-215ENST00000612337 BCANQ96GW7 911 aa27.22■■□□□ 1.95
SSBP1-215ENST00000612337 NKTRP30414 1462 aaKnown RBP27.21■■□□□ 1.95
SSBP1-215ENST00000612337 ITGAEP38570 1179 aa27.21■■□□□ 1.95
SSBP1-215ENST00000612337 PPARGC1BQ86YN6 1023 aaKnown RBP27.21■■□□□ 1.95
SSBP1-215ENST00000612337 SENP3Q9H4L4 574 aaPredicted RBP27.21■■□□□ 1.95
SSBP1-215ENST00000612337 PROSER2Q86WR7 435 aaPredicted RBP27.2■■□□□ 1.94
SSBP1-215ENST00000612337 NUP155O75694 1391 aa27.2■■□□□ 1.94
SSBP1-215ENST00000612337 PPP1R15AO75807 674 aaPredicted RBP27.19■■□□□ 1.94
SSBP1-215ENST00000612337 FAM135BQ49AJ0 1406 aa27.18■■□□□ 1.94
SSBP1-215ENST00000612337 CHGAP10645 457 aaKnown RBP27.16■■□□□ 1.94
SSBP1-215ENST00000612337 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
SSBP1-215ENST00000612337 CHD2O14647 1828 aaKnown RBP27.14■■□□□ 1.94
SSBP1-215ENST00000612337 RBM33Q96EV2 1170 aaKnown RBP27.14■■□□□ 1.94
SSBP1-215ENST00000612337 PHF23Q9BUL5 403 aaPredicted RBP27.12■■□□□ 1.93
SSBP1-215ENST00000612337 TBX22Q9Y458 520 aa27.12■■□□□ 1.93
SSBP1-215ENST00000612337 MSH6P52701 1360 aa27.09■■□□□ 1.93
SSBP1-215ENST00000612337 ROBO1Q9Y6N7 1651 aa27.08■■□□□ 1.92
SSBP1-215ENST00000612337 ADAMTS13Q76LX8 1427 aa27.07■■□□□ 1.92
SSBP1-215ENST00000612337 RRBP1Q9P2E9 1410 aaKnown RBP27.07■■□□□ 1.92
SSBP1-215ENST00000612337 DIP2AQ14689 1571 aa27.07■■□□□ 1.92
SSBP1-215ENST00000612337 NUTM2DQ5VT03 806 aaPredicted RBP27.07■■□□□ 1.92
SSBP1-215ENST00000612337 PIK3R4Q99570 1358 aa27.04■■□□□ 1.92
SSBP1-215ENST00000612337 SPHKAPQ2M3C7 1700 aa27.04■■□□□ 1.92
SSBP1-215ENST00000612337 NCOA3Q9Y6Q9 1424 aa27.03■■□□□ 1.92
SSBP1-215ENST00000612337 SLAIN2Q9P270 581 aa27.01■■□□□ 1.91
SSBP1-215ENST00000612337 TRPM2O94759 1503 aa26.98■■□□□ 1.91
SSBP1-215ENST00000612337 NAIPQ13075 1403 aa26.98■■□□□ 1.91
SSBP1-215ENST00000612337 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
SSBP1-215ENST00000612337 SETBP1Q9Y6X0 1596 aa26.92■■□□□ 1.9
SSBP1-215ENST00000612337 PTPRUQ92729 1446 aa26.92■■□□□ 1.9
SSBP1-215ENST00000612337 NRXN3Q9Y4C0 1643 aa26.92■■□□□ 1.9
SSBP1-215ENST00000612337 ZNF326Q5BKZ1 582 aaKnown RBP26.92■■□□□ 1.9
SSBP1-215ENST00000612337 RGS17Q9UGC6 210 aaPredicted RBP26.92■■□□□ 1.9
SSBP1-215ENST00000612337 AMOTL2Q9Y2J4 779 aa26.92■■□□□ 1.9
SSBP1-215ENST00000612337 PHLPP1O60346 1717 aa26.91■■□□□ 1.9
SSBP1-215ENST00000612337 C19orf44Q9H6X5 657 aa26.91■■□□□ 1.9
SSBP1-215ENST00000612337 CLTCL1P53675 1640 aa26.9■■□□□ 1.9
SSBP1-215ENST00000612337 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.9■■□□□ 1.9
SSBP1-215ENST00000612337 CADPS2Q86UW7 1296 aa26.89■■□□□ 1.9
SSBP1-215ENST00000612337 ATF3P18847 181 aa26.87■■□□□ 1.89
SSBP1-215ENST00000612337 HFM1A2PYH4 1435 aa26.87■■□□□ 1.89
SSBP1-215ENST00000612337 XRN1Q8IZH2 1706 aaKnown RBP26.86■■□□□ 1.89
SSBP1-215ENST00000612337 NEXMIFQ5QGS0 1516 aa26.85■■□□□ 1.89
SSBP1-215ENST00000612337 JCADQ9P266 1359 aa26.85■■□□□ 1.89
SSBP1-215ENST00000612337 COL16A1Q07092 1604 aaPredicted RBP26.84■■□□□ 1.89
SSBP1-215ENST00000612337 KIF1BO60333 1816 aa26.84■■□□□ 1.89
SSBP1-215ENST00000612337 TRIM52Q96A61 297 aa26.82■■□□□ 1.88
SSBP1-215ENST00000612337 METP08581 1390 aa26.82■■□□□ 1.88
SSBP1-215ENST00000612337 DCCP43146 1447 aa26.81■■□□□ 1.88
SSBP1-215ENST00000612337 AHDC1Q5TGY3 1603 aaPredicted RBP26.8■■□□□ 1.88
SSBP1-215ENST00000612337 SLC4A1APQ9BWU0 796 aaKnown RBP26.77■■□□□ 1.88
SSBP1-215ENST00000612337 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
SSBP1-215ENST00000612337 BRINP3Q76B58 766 aa26.75■■□□□ 1.87
SSBP1-215ENST00000612337 SPATA31A6Q5VVP1 1343 aa26.72■■□□□ 1.87
SSBP1-215ENST00000612337 VGFO15240 615 aaPredicted RBP26.72■■□□□ 1.87
SSBP1-215ENST00000612337 MST1RQ04912 1400 aa26.71■■□□□ 1.87
SSBP1-215ENST00000612337 ADGRL3Q9HAR2 1447 aa26.71■■□□□ 1.87
SSBP1-215ENST00000612337 RPGRIP1LQ68CZ1 1315 aa26.7■■□□□ 1.87
SSBP1-215ENST00000612337 SHPRHQ149N8 1683 aa26.7■■□□□ 1.87
SSBP1-215ENST00000612337 ASXL1Q8IXJ9 1541 aa26.69■■□□□ 1.86
SSBP1-215ENST00000612337 SETD1AO15047 1707 aaKnown RBP26.68■■□□□ 1.86
SSBP1-215ENST00000612337 LRP6O75581 1613 aa26.68■■□□□ 1.86
SSBP1-215ENST00000612337 NALCNQ8IZF0 1738 aa26.66■■□□□ 1.86
SSBP1-215ENST00000612337 PTCH1Q13635 1447 aa26.65■■□□□ 1.86
SSBP1-215ENST00000612337 PPLO60437 1756 aa26.65■■□□□ 1.86
SSBP1-215ENST00000612337 NHSL1Q5SYE7 1610 aa26.64■■□□□ 1.85
SSBP1-215ENST00000612337 FOXD1Q16676 465 aa26.62■■□□□ 1.85
SSBP1-215ENST00000612337 MEX3CQ5U5Q3 659 aaKnown RBP26.62■■□□□ 1.85
SSBP1-215ENST00000612337 PRAG1Q86YV5 1406 aa26.62■■□□□ 1.85
SSBP1-215ENST00000612337 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
SSBP1-215ENST00000612337 ROBO2Q9HCK4 1378 aa26.6■■□□□ 1.85
SSBP1-215ENST00000612337 CCDC144AA2RUR9 1427 aa26.58■■□□□ 1.85
SSBP1-215ENST00000612337 ZNF772Q68DY9 489 aaPredicted RBP26.57■■□□□ 1.84
SSBP1-215ENST00000612337 C1orf167Q5SNV9 1468 aa26.56■■□□□ 1.84
SSBP1-215ENST00000612337 LRRC59Q96AG4 307 aaKnown RBP26.56■■□□□ 1.84
SSBP1-215ENST00000612337 MPHOSPH9Q99550 1183 aa26.56■■□□□ 1.84
SSBP1-215ENST00000612337 SPATA31E1Q6ZUB1 1445 aa26.54■■□□□ 1.84
SSBP1-215ENST00000612337 NUTM2BA6NNL0 878 aaPredicted RBP26.53■■□□□ 1.84
SSBP1-215ENST00000612337 NUTM2EB1AL46 878 aaPredicted RBP26.53■■□□□ 1.84
SSBP1-215ENST00000612337 NUTM2AQ8IVF1 878 aaPredicted RBP26.53■■□□□ 1.84
SSBP1-215ENST00000612337 DDX17Q92841 729 aaKnown RBP26.53■■□□□ 1.84
SSBP1-215ENST00000612337 ADGRF5Q8IZF2 1346 aa26.51■■□□□ 1.83
SSBP1-215ENST00000612337 LAMC1P11047 1609 aa26.5■■□□□ 1.83
SSBP1-215ENST00000612337 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
SSBP1-215ENST00000612337 ANKRD30BQ9BXX2 1392 aa26.49■■□□□ 1.83
SSBP1-215ENST00000612337 ACIN1Q9UKV3 1341 aaKnown RBP26.49■■□□□ 1.83
SSBP1-215ENST00000612337 IFT172Q9UG01 1749 aa26.49■■□□□ 1.83
SSBP1-215ENST00000612337 PNPLA6Q8IY17 1366 aa26.48■■□□□ 1.83
SSBP1-215ENST00000612337 ORAI2Q96SN7 254 aa26.46■■□□□ 1.83
SSBP1-215ENST00000612337 SOS2Q07890 1332 aaPredicted RBP26.44■■□□□ 1.82
SSBP1-215ENST00000612337 AFF2P51816 1311 aa26.43■■□□□ 1.82
SSBP1-215ENST00000612337 CDC42BPGQ6DT37 1551 aa26.43■■□□□ 1.82
SSBP1-215ENST00000612337 TECPR2O15040 1411 aa26.43■■□□□ 1.82
SSBP1-215ENST00000612337 PIK3C2GO75747 1445 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms