RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 NUTM2DQ5VT03 806 aaPredicted RBP18.52■□□□□ 0.56
FAM228B-207ENST00000611917 SCAF1Q9H7N4 1312 aaKnown RBP18.51■□□□□ 0.55
FAM228B-207ENST00000611917 KDM5AP29375 1690 aaKnown RBP18.51■□□□□ 0.55
FAM228B-207ENST00000611917 GCC2Q8IWJ2 1684 aa18.51■□□□□ 0.55
FAM228B-207ENST00000611917 PIP4K2BP78356 416 aa18.51■□□□□ 0.55
FAM228B-207ENST00000611917 MPHOSPH9Q99550 1183 aa18.51■□□□□ 0.55
FAM228B-207ENST00000611917 SENP3Q9H4L4 574 aaPredicted RBP18.51■□□□□ 0.55
FAM228B-207ENST00000611917 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
FAM228B-207ENST00000611917 ADGRB3O60242 1522 aa18.49■□□□□ 0.55
FAM228B-207ENST00000611917 PLEKHG1Q9ULL1 1385 aa18.49■□□□□ 0.55
FAM228B-207ENST00000611917 E9PCH4 1651 aa18.47■□□□□ 0.55
FAM228B-207ENST00000611917 VGFO15240 615 aaPredicted RBP18.47■□□□□ 0.55
FAM228B-207ENST00000611917 SETD5Q9C0A6 1442 aa18.47■□□□□ 0.55
FAM228B-207ENST00000611917 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
FAM228B-207ENST00000611917 ZFYVE9O95405 1425 aa18.45■□□□□ 0.54
FAM228B-207ENST00000611917 HRCP23327 699 aa18.44■□□□□ 0.54
FAM228B-207ENST00000611917 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
FAM228B-207ENST00000611917 FOXD1Q16676 465 aa18.43■□□□□ 0.54
FAM228B-207ENST00000611917 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
FAM228B-207ENST00000611917 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
FAM228B-207ENST00000611917 AMOTL2Q9Y2J4 779 aa18.4■□□□□ 0.54
FAM228B-207ENST00000611917 TMEM94Q12767 1356 aa18.4■□□□□ 0.54
FAM228B-207ENST00000611917 PIK3R4Q99570 1358 aa18.39■□□□□ 0.53
FAM228B-207ENST00000611917 RGL3Q3MIN7 710 aa18.38■□□□□ 0.53
FAM228B-207ENST00000611917 RBM33Q96EV2 1170 aaKnown RBP18.38■□□□□ 0.53
FAM228B-207ENST00000611917 HSPA1LP34931 641 aa18.37■□□□□ 0.53
FAM228B-207ENST00000611917 C19orf44Q9H6X5 657 aa18.35■□□□□ 0.53
FAM228B-207ENST00000611917 CCDC144AA2RUR9 1427 aa18.34■□□□□ 0.53
FAM228B-207ENST00000611917 MSH6P52701 1360 aa18.34■□□□□ 0.53
FAM228B-207ENST00000611917 RAB3GAP2Q9H2M9 1393 aa18.34■□□□□ 0.53
FAM228B-207ENST00000611917 TRPM2O94759 1503 aa18.33■□□□□ 0.53
FAM228B-207ENST00000611917 ATF3P18847 181 aa18.33■□□□□ 0.52
FAM228B-207ENST00000611917 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
FAM228B-207ENST00000611917 ADAMTS13Q76LX8 1427 aa18.32■□□□□ 0.52
FAM228B-207ENST00000611917 NCOA3Q9Y6Q9 1424 aa18.32■□□□□ 0.52
FAM228B-207ENST00000611917 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
FAM228B-207ENST00000611917 CADPS2Q86UW7 1296 aa18.31■□□□□ 0.52
FAM228B-207ENST00000611917 NKTRP30414 1462 aaKnown RBP18.3■□□□□ 0.52
FAM228B-207ENST00000611917 STRCP1A6NGW2 1772 aa18.29■□□□□ 0.52
FAM228B-207ENST00000611917 MYO5BQ9ULV0 1848 aa18.28■□□□□ 0.52
FAM228B-207ENST00000611917 FAM135BQ49AJ0 1406 aa18.27■□□□□ 0.52
FAM228B-207ENST00000611917 ANKRD30BQ9BXX2 1392 aa18.27■□□□□ 0.51
FAM228B-207ENST00000611917 DISP3Q9P2K9 1392 aa18.27■□□□□ 0.51
FAM228B-207ENST00000611917 CLTCL1P53675 1640 aa18.27■□□□□ 0.51
FAM228B-207ENST00000611917 METP08581 1390 aa18.26■□□□□ 0.51
FAM228B-207ENST00000611917 DIP2AQ14689 1571 aa18.25■□□□□ 0.51
FAM228B-207ENST00000611917 KIF1BO60333 1816 aa18.24■□□□□ 0.51
FAM228B-207ENST00000611917 ADGRF5Q8IZF2 1346 aa18.23■□□□□ 0.51
FAM228B-207ENST00000611917 STAC3Q96MF2 364 aa18.22■□□□□ 0.51
FAM228B-207ENST00000611917 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
FAM228B-207ENST00000611917 CHD2O14647 1828 aaKnown RBP18.21■□□□□ 0.51
FAM228B-207ENST00000611917 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
FAM228B-207ENST00000611917 NWD1Q149M9 1564 aa18.21■□□□□ 0.51
FAM228B-207ENST00000611917 SETBP1Q9Y6X0 1596 aa18.21■□□□□ 0.51
FAM228B-207ENST00000611917 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
FAM228B-207ENST00000611917 STK26Q9P289 416 aa18.18■□□□□ 0.5
FAM228B-207ENST00000611917 C14orf93Q9H972 538 aaKnown RBP18.17■□□□□ 0.5
FAM228B-207ENST00000611917 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
FAM228B-207ENST00000611917 ALKQ9UM73 1620 aa18.16■□□□□ 0.5
FAM228B-207ENST00000611917 TMEM132EQ6IEE7 984 aa18.15■□□□□ 0.5
FAM228B-207ENST00000611917 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
FAM228B-207ENST00000611917 PHF23Q9BUL5 403 aaPredicted RBP18.15■□□□□ 0.5
FAM228B-207ENST00000611917 SIRT1Q96EB6 747 aa18.14■□□□□ 0.49
FAM228B-207ENST00000611917 CFAP70Q5T0N1 1121 aa18.12■□□□□ 0.49
FAM228B-207ENST00000611917 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
FAM228B-207ENST00000611917 XIRP1Q702N8 1843 aaKnown RBP18.12■□□□□ 0.49
FAM228B-207ENST00000611917 NRXN3Q9Y4C0 1643 aa18.1■□□□□ 0.49
FAM228B-207ENST00000611917 DCCP43146 1447 aa18.1■□□□□ 0.49
FAM228B-207ENST00000611917 ABCC11Q96J66 1382 aa18.1■□□□□ 0.49
FAM228B-207ENST00000611917 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
FAM228B-207ENST00000611917 LRPPRCP42704 1394 aaKnown RBP18.09■□□□□ 0.49
FAM228B-207ENST00000611917 ROBO2Q9HCK4 1378 aa18.09■□□□□ 0.49
FAM228B-207ENST00000611917 WAPLQ7Z5K2 1190 aa18.09■□□□□ 0.49
FAM228B-207ENST00000611917 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
FAM228B-207ENST00000611917 LRRC59Q96AG4 307 aaKnown RBP18.08■□□□□ 0.48
FAM228B-207ENST00000611917 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
FAM228B-207ENST00000611917 ADGRL3Q9HAR2 1447 aa18.06■□□□□ 0.48
FAM228B-207ENST00000611917 JCADQ9P266 1359 aa18.06■□□□□ 0.48
FAM228B-207ENST00000611917 POGKQ9P215 609 aa18.06■□□□□ 0.48
FAM228B-207ENST00000611917 PIK3C2GO75747 1445 aa18.05■□□□□ 0.48
FAM228B-207ENST00000611917 PPLO60437 1756 aa18.04■□□□□ 0.48
FAM228B-207ENST00000611917 ILDR2Q71H61 639 aa18.04■□□□□ 0.48
FAM228B-207ENST00000611917 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.03■□□□□ 0.48
FAM228B-207ENST00000611917 ESCO1Q5FWF5 840 aa18.03■□□□□ 0.48
FAM228B-207ENST00000611917 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
FAM228B-207ENST00000611917 ROBO1Q9Y6N7 1651 aa18.03■□□□□ 0.48
FAM228B-207ENST00000611917 YTHDC2Q9H6S0 1430 aaKnown RBP18.02■□□□□ 0.48
FAM228B-207ENST00000611917 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
FAM228B-207ENST00000611917 MST1RQ04912 1400 aa18.01■□□□□ 0.47
FAM228B-207ENST00000611917 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
FAM228B-207ENST00000611917 ORAI2Q96SN7 254 aa18.01■□□□□ 0.47
FAM228B-207ENST00000611917 PRAM1Q96QH2 718 aa18■□□□□ 0.47
FAM228B-207ENST00000611917 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
FAM228B-207ENST00000611917 MYOM2P54296 1465 aa18■□□□□ 0.47
FAM228B-207ENST00000611917 MEX3CQ5U5Q3 659 aaKnown RBP17.99■□□□□ 0.47
FAM228B-207ENST00000611917 TECPR2O15040 1411 aa17.98■□□□□ 0.47
FAM228B-207ENST00000611917 NEUROD1Q13562 356 aa17.98■□□□□ 0.47
FAM228B-207ENST00000611917 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
FAM228B-207ENST00000611917 C1orf167Q5SNV9 1468 aa17.98■□□□□ 0.47
FAM228B-207ENST00000611917 NRXN1Q9ULB1 1477 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms