RNA–Protein interactions for RNA: ENST00000611074.4

RAVER1-206, Transcript of ribonucleoprotein, PTB binding 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene RAVER1, Length 3,586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAVER1-206ENST00000611074 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
RAVER1-206ENST00000611074 SHANK2Q9UPX8 1470 aa17.82■□□□□ 0.44
RAVER1-206ENST00000611074 MAPK8IP3Q9UPT6 1336 aa17.81■□□□□ 0.44
RAVER1-206ENST00000611074 CCDC141Q6ZP82 1450 aa17.81■□□□□ 0.44
RAVER1-206ENST00000611074 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
RAVER1-206ENST00000611074 PTPRGP23470 1445 aa17.8■□□□□ 0.44
RAVER1-206ENST00000611074 INSRP06213 1382 aa17.8■□□□□ 0.44
RAVER1-206ENST00000611074 ZNF521Q96K83 1311 aa17.8■□□□□ 0.44
RAVER1-206ENST00000611074 FAM43AQ8N2R8 423 aa17.79■□□□□ 0.44
RAVER1-206ENST00000611074 MAGI2Q86UL8 1455 aa17.78■□□□□ 0.44
RAVER1-206ENST00000611074 RSPH6AQ9H0K4 717 aa17.78■□□□□ 0.44
RAVER1-206ENST00000611074 L1TD1Q5T7N2 865 aaKnown RBP17.78■□□□□ 0.44
RAVER1-206ENST00000611074 NKTRP30414 1462 aaKnown RBP17.77■□□□□ 0.44
RAVER1-206ENST00000611074 PLA2R1Q13018 1463 aa17.77■□□□□ 0.44
RAVER1-206ENST00000611074 EIF3AQ14152 1382 aaKnown RBP17.77■□□□□ 0.44
RAVER1-206ENST00000611074 CHGAP10645 457 aaKnown RBP17.77■□□□□ 0.44
RAVER1-206ENST00000611074 PDE3AQ14432 1141 aa17.77■□□□□ 0.44
RAVER1-206ENST00000611074 ABCC10Q5T3U5 1492 aa17.76■□□□□ 0.43
RAVER1-206ENST00000611074 PMFBP1Q8TBY8 1022 aa17.75■□□□□ 0.43
RAVER1-206ENST00000611074 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
RAVER1-206ENST00000611074 E9PCH4 1651 aa17.74■□□□□ 0.43
RAVER1-206ENST00000611074 CROCC2H7BZ55 1655 aa17.74■□□□□ 0.43
RAVER1-206ENST00000611074 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
RAVER1-206ENST00000611074 PDZRN3Q9UPQ7 1066 aa17.74■□□□□ 0.43
RAVER1-206ENST00000611074 ERCC6Q03468 1493 aa17.73■□□□□ 0.43
RAVER1-206ENST00000611074 MFAP1P55081 439 aaKnown RBP17.73■□□□□ 0.43
RAVER1-206ENST00000611074 FTSJ3Q8IY81 847 aaKnown RBP17.73■□□□□ 0.43
RAVER1-206ENST00000611074 TNNQ9UQP3 1299 aa17.73■□□□□ 0.43
RAVER1-206ENST00000611074 SYNJ2O15056 1496 aa17.73■□□□□ 0.43
RAVER1-206ENST00000611074 USP19O94966 1318 aa17.73■□□□□ 0.43
RAVER1-206ENST00000611074 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
RAVER1-206ENST00000611074 TRPM1Q7Z4N2 1603 aa17.72■□□□□ 0.43
RAVER1-206ENST00000611074 CFAP70Q5T0N1 1121 aa17.72■□□□□ 0.43
RAVER1-206ENST00000611074 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
RAVER1-206ENST00000611074 RWDD1Q9H446 243 aaPredicted RBP17.72■□□□□ 0.43
RAVER1-206ENST00000611074 TRMT2AQ8IZ69 625 aaKnown RBP17.71■□□□□ 0.43
RAVER1-206ENST00000611074 ARHGAP5Q13017 1502 aa17.71■□□□□ 0.43
RAVER1-206ENST00000611074 TBC1D2Q9BYX2 928 aa17.7■□□□□ 0.42
RAVER1-206ENST00000611074 PCDHB15Q9Y5E8 787 aa17.7■□□□□ 0.42
RAVER1-206ENST00000611074 WDR7Q9Y4E6 1490 aa17.7■□□□□ 0.42
RAVER1-206ENST00000611074 TCP11L2Q8N4U5 519 aa17.69■□□□□ 0.42
RAVER1-206ENST00000611074 EIF4G3O43432 1585 aaKnown RBP17.69■□□□□ 0.42
RAVER1-206ENST00000611074 CDC42BPAQ5VT25 1732 aa17.69■□□□□ 0.42
RAVER1-206ENST00000611074 PRDM15P57071 1507 aaPredicted RBP17.68■□□□□ 0.42
RAVER1-206ENST00000611074 RLBP1P12271 317 aa17.68■□□□□ 0.42
RAVER1-206ENST00000611074 RARSP54136 660 aaKnown RBP17.68■□□□□ 0.42
RAVER1-206ENST00000611074 EFCAB2Q5VUJ9 269 aa17.67■□□□□ 0.42
RAVER1-206ENST00000611074 SYCP2Q9BX26 1530 aa17.67■□□□□ 0.42
RAVER1-206ENST00000611074 SENP3Q9H4L4 574 aaPredicted RBP17.67■□□□□ 0.42
RAVER1-206ENST00000611074 ASXL1Q8IXJ9 1541 aa17.67■□□□□ 0.42
RAVER1-206ENST00000611074 CARD14Q9BXL6 1004 aa17.66■□□□□ 0.42
RAVER1-206ENST00000611074 RRAGDQ9NQL2 400 aaPredicted RBP17.66■□□□□ 0.42
RAVER1-206ENST00000611074 NUP160Q12769 1436 aa17.66■□□□□ 0.42
RAVER1-206ENST00000611074 ADCY10Q96PN6 1610 aa17.66■□□□□ 0.42
RAVER1-206ENST00000611074 PIK3C2GO75747 1445 aa17.66■□□□□ 0.42
RAVER1-206ENST00000611074 PNNQ9H307 717 aaKnown RBP17.65■□□□□ 0.42
RAVER1-206ENST00000611074 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
RAVER1-206ENST00000611074 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.42
RAVER1-206ENST00000611074 NGEFQ8N5V2 710 aa17.65■□□□□ 0.42
RAVER1-206ENST00000611074 TBC1D32Q96NH3 1257 aa17.65■□□□□ 0.42
RAVER1-206ENST00000611074 AFAP1Q8N556 730 aa17.65■□□□□ 0.42
RAVER1-206ENST00000611074 RUNDC1Q96C34 613 aa17.65■□□□□ 0.42
RAVER1-206ENST00000611074 SPAG9O60271 1321 aaKnown RBP17.64■□□□□ 0.41
RAVER1-206ENST00000611074 UBE2Q2Q8WVN8 375 aa17.64■□□□□ 0.41
RAVER1-206ENST00000611074 CFAP53Q96M91 514 aa17.64■□□□□ 0.41
RAVER1-206ENST00000611074 TRAK1Q9UPV9 953 aa17.64■□□□□ 0.41
RAVER1-206ENST00000611074 HSP90AA1P07900 732 aaKnown RBP17.64■□□□□ 0.41
RAVER1-206ENST00000611074 C22orf23Q9BZE7 217 aa17.63■□□□□ 0.41
RAVER1-206ENST00000611074 KIF3BO15066 747 aa17.63■□□□□ 0.41
RAVER1-206ENST00000611074 MCM4P33991 863 aa17.63■□□□□ 0.41
RAVER1-206ENST00000611074 SCAF11Q99590 1463 aaKnown RBP17.63■□□□□ 0.41
RAVER1-206ENST00000611074 HSCBQ8IWL3 235 aa17.63■□□□□ 0.41
RAVER1-206ENST00000611074 PANK2Q9BZ23 570 aa17.63■□□□□ 0.41
RAVER1-206ENST00000611074 ITPRIPQ8IWB1 547 aa17.62■□□□□ 0.41
RAVER1-206ENST00000611074 SLC12A5Q9H2X9 1139 aa17.62■□□□□ 0.41
RAVER1-206ENST00000611074 XRCC6P12956 609 aaKnown RBP eCLIP17.61■□□□□ 0.41
RAVER1-206ENST00000611074 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
RAVER1-206ENST00000611074 MTHFSP49914 203 aa17.61■□□□□ 0.41
RAVER1-206ENST00000611074 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
RAVER1-206ENST00000611074 TRAK2O60296 914 aa17.61■□□□□ 0.41
RAVER1-206ENST00000611074 MYH16Q9H6N6 1097 aa17.61■□□□□ 0.41
RAVER1-206ENST00000611074 EIF2AK4Q9P2K8 1649 aaKnown RBP17.61■□□□□ 0.41
RAVER1-206ENST00000611074 ARHGEF5Q12774 1597 aa17.61■□□□□ 0.41
RAVER1-206ENST00000611074 CHMP5Q9NZZ3 219 aa17.6■□□□□ 0.41
RAVER1-206ENST00000611074 SAMD9LQ8IVG5 1584 aa17.6■□□□□ 0.41
RAVER1-206ENST00000611074 ZKSCAN2Q63HK3 967 aa17.6■□□□□ 0.41
RAVER1-206ENST00000611074 ANTXR1Q9H6X2 564 aa17.59■□□□□ 0.41
RAVER1-206ENST00000611074 ABCA8O94911 1581 aa17.59■□□□□ 0.41
RAVER1-206ENST00000611074 DZIP1LQ8IYY4 767 aaKnown RBP17.59■□□□□ 0.41
RAVER1-206ENST00000611074 NINLQ9Y2I6 1382 aa17.59■□□□□ 0.41
RAVER1-206ENST00000611074 TSR2Q969E8 191 aaKnown RBP17.59■□□□□ 0.41
RAVER1-206ENST00000611074 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
RAVER1-206ENST00000611074 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
RAVER1-206ENST00000611074 TRIM44Q96DX7 344 aaPredicted RBP17.57■□□□□ 0.4
RAVER1-206ENST00000611074 HSP90AB1P08238 724 aaKnown RBP17.56■□□□□ 0.4
RAVER1-206ENST00000611074 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
RAVER1-206ENST00000611074 SAFB2Q14151 953 aaKnown RBP eCLIP17.56■□□□□ 0.4
RAVER1-206ENST00000611074 MVPQ14764 893 aaKnown RBP17.56■□□□□ 0.4
RAVER1-206ENST00000611074 KANK1Q14678 1352 aa17.55■□□□□ 0.4
RAVER1-206ENST00000611074 NPC1L1Q9UHC9 1359 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms