RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 UNC13BO14795 1591 aa18.61■□□□□ 0.57
FDPS-220ENST00000611010 SLC26A8Q96RN1 970 aa18.61■□□□□ 0.57
FDPS-220ENST00000611010 ANKRD30AQ9BXX3 1397 aa18.6■□□□□ 0.57
FDPS-220ENST00000611010 KCNA6P17658 529 aa18.6■□□□□ 0.57
FDPS-220ENST00000611010 CHIC2Q9UKJ5 165 aa18.6■□□□□ 0.57
FDPS-220ENST00000611010 E9PCH4 1651 aa18.6■□□□□ 0.57
FDPS-220ENST00000611010 POTEAQ6S8J7 498 aa18.59■□□□□ 0.57
FDPS-220ENST00000611010 RPRD2Q5VT52 1461 aaKnown RBP18.58■□□□□ 0.57
FDPS-220ENST00000611010 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
FDPS-220ENST00000611010 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
FDPS-220ENST00000611010 LRP6O75581 1613 aa18.54■□□□□ 0.56
FDPS-220ENST00000611010 PLEKHG1Q9ULL1 1385 aa18.54■□□□□ 0.56
FDPS-220ENST00000611010 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
FDPS-220ENST00000611010 RIMS2Q9UQ26 1411 aa18.53■□□□□ 0.56
FDPS-220ENST00000611010 ANKRD50Q9ULJ7 1429 aa18.52■□□□□ 0.56
FDPS-220ENST00000611010 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.55
FDPS-220ENST00000611010 SHPRHQ149N8 1683 aa18.51■□□□□ 0.55
FDPS-220ENST00000611010 ADAMTS13Q76LX8 1427 aa18.51■□□□□ 0.55
FDPS-220ENST00000611010 MSH6P52701 1360 aa18.51■□□□□ 0.55
FDPS-220ENST00000611010 DIP2AQ14689 1571 aa18.51■□□□□ 0.55
FDPS-220ENST00000611010 AHDC1Q5TGY3 1603 aaPredicted RBP18.5■□□□□ 0.55
FDPS-220ENST00000611010 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
FDPS-220ENST00000611010 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
FDPS-220ENST00000611010 XRN1Q8IZH2 1706 aaKnown RBP18.47■□□□□ 0.55
FDPS-220ENST00000611010 JCADQ9P266 1359 aa18.45■□□□□ 0.54
FDPS-220ENST00000611010 SLAIN2Q9P270 581 aa18.45■□□□□ 0.54
FDPS-220ENST00000611010 PTPRUQ92729 1446 aa18.43■□□□□ 0.54
FDPS-220ENST00000611010 SPHKAPQ2M3C7 1700 aa18.42■□□□□ 0.54
FDPS-220ENST00000611010 TRPM2O94759 1503 aa18.42■□□□□ 0.54
FDPS-220ENST00000611010 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
FDPS-220ENST00000611010 NCOA3Q9Y6Q9 1424 aa18.41■□□□□ 0.54
FDPS-220ENST00000611010 APLP2Q06481 763 aa18.41■□□□□ 0.54
FDPS-220ENST00000611010 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
FDPS-220ENST00000611010 NUTM2DQ5VT03 806 aaPredicted RBP18.39■□□□□ 0.53
FDPS-220ENST00000611010 BCANQ96GW7 911 aa18.39■□□□□ 0.53
FDPS-220ENST00000611010 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
FDPS-220ENST00000611010 SETBP1Q9Y6X0 1596 aa18.38■□□□□ 0.53
FDPS-220ENST00000611010 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
FDPS-220ENST00000611010 PPP1R15AO75807 674 aaPredicted RBP18.37■□□□□ 0.53
FDPS-220ENST00000611010 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
FDPS-220ENST00000611010 PIK3R4Q99570 1358 aa18.36■□□□□ 0.53
FDPS-220ENST00000611010 ROCK1Q13464 1354 aa18.34■□□□□ 0.53
FDPS-220ENST00000611010 SPATA31A6Q5VVP1 1343 aa18.33■□□□□ 0.53
FDPS-220ENST00000611010 CLTCL1P53675 1640 aa18.33■□□□□ 0.52
FDPS-220ENST00000611010 DCCP43146 1447 aa18.32■□□□□ 0.52
FDPS-220ENST00000611010 MST1RQ04912 1400 aa18.32■□□□□ 0.52
FDPS-220ENST00000611010 CHGAP10645 457 aaKnown RBP18.31■□□□□ 0.52
FDPS-220ENST00000611010 BRINP3Q76B58 766 aa18.31■□□□□ 0.52
FDPS-220ENST00000611010 NEXMIFQ5QGS0 1516 aa18.31■□□□□ 0.52
FDPS-220ENST00000611010 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.3■□□□□ 0.52
FDPS-220ENST00000611010 CADPS2Q86UW7 1296 aa18.29■□□□□ 0.52
FDPS-220ENST00000611010 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
FDPS-220ENST00000611010 LAMC1P11047 1609 aa18.28■□□□□ 0.52
FDPS-220ENST00000611010 SETD5Q9C0A6 1442 aa18.27■□□□□ 0.52
FDPS-220ENST00000611010 HDGFP51858 240 aaKnown RBP18.27■□□□□ 0.52
FDPS-220ENST00000611010 C14orf37Q86TY3 774 aa18.27■□□□□ 0.52
FDPS-220ENST00000611010 AMOTL2Q9Y2J4 779 aa18.27■□□□□ 0.52
FDPS-220ENST00000611010 NUP155O75694 1391 aa18.27■□□□□ 0.51
FDPS-220ENST00000611010 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
FDPS-220ENST00000611010 METP08581 1390 aa18.26■□□□□ 0.51
FDPS-220ENST00000611010 CDK12Q9NYV4 1490 aaPredicted RBP18.26■□□□□ 0.51
FDPS-220ENST00000611010 TRIM52Q96A61 297 aa18.25■□□□□ 0.51
FDPS-220ENST00000611010 ADGRL3Q9HAR2 1447 aa18.24■□□□□ 0.51
FDPS-220ENST00000611010 KIF1BO60333 1816 aa18.24■□□□□ 0.51
FDPS-220ENST00000611010 ATF3P18847 181 aa18.24■□□□□ 0.51
FDPS-220ENST00000611010 MEX3CQ5U5Q3 659 aaKnown RBP18.23■□□□□ 0.51
FDPS-220ENST00000611010 RGS12O14924 1447 aa18.23■□□□□ 0.51
FDPS-220ENST00000611010 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
FDPS-220ENST00000611010 PNPLA6Q8IY17 1366 aa18.21■□□□□ 0.51
FDPS-220ENST00000611010 DDX17Q92841 729 aaKnown RBP18.2■□□□□ 0.5
FDPS-220ENST00000611010 AFF2P51816 1311 aa18.2■□□□□ 0.5
FDPS-220ENST00000611010 NUTM2BA6NNL0 878 aaPredicted RBP18.19■□□□□ 0.5
FDPS-220ENST00000611010 NUTM2EB1AL46 878 aaPredicted RBP18.19■□□□□ 0.5
FDPS-220ENST00000611010 NUTM2AQ8IVF1 878 aaPredicted RBP18.19■□□□□ 0.5
FDPS-220ENST00000611010 PPLO60437 1756 aa18.17■□□□□ 0.5
FDPS-220ENST00000611010 C1orf167Q5SNV9 1468 aa18.16■□□□□ 0.5
FDPS-220ENST00000611010 COL22A1Q8NFW1 1626 aaPredicted RBP18.16■□□□□ 0.5
FDPS-220ENST00000611010 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
FDPS-220ENST00000611010 PRAG1Q86YV5 1406 aa18.15■□□□□ 0.5
FDPS-220ENST00000611010 RXRBP28702 533 aa18.15■□□□□ 0.5
FDPS-220ENST00000611010 ITGAEP38570 1179 aa18.14■□□□□ 0.49
FDPS-220ENST00000611010 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
FDPS-220ENST00000611010 ROBO2Q9HCK4 1378 aa18.12■□□□□ 0.49
FDPS-220ENST00000611010 NAIPQ13075 1403 aa18.1■□□□□ 0.49
FDPS-220ENST00000611010 ZNF326Q5BKZ1 582 aaKnown RBP18.1■□□□□ 0.49
FDPS-220ENST00000611010 C8orf37Q96NL8 207 aa18.1■□□□□ 0.49
FDPS-220ENST00000611010 EP400Q96L91 3159 aa18.1■□□□□ 0.49
FDPS-220ENST00000611010 LRRC59Q96AG4 307 aaKnown RBP18.09■□□□□ 0.49
FDPS-220ENST00000611010 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
FDPS-220ENST00000611010 CDC42BPGQ6DT37 1551 aa18.08■□□□□ 0.49
FDPS-220ENST00000611010 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
FDPS-220ENST00000611010 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.48
FDPS-220ENST00000611010 RRBP1Q9P2E9 1410 aaKnown RBP18.06■□□□□ 0.48
FDPS-220ENST00000611010 MYOM2P54296 1465 aa18.06■□□□□ 0.48
FDPS-220ENST00000611010 SOS2Q07890 1332 aaPredicted RBP18.05■□□□□ 0.48
FDPS-220ENST00000611010 ORAI2Q96SN7 254 aa18.05■□□□□ 0.48
FDPS-220ENST00000611010 PXDNQ92626 1479 aa18.05■□□□□ 0.48
FDPS-220ENST00000611010 RBM6P78332 1123 aaKnown RBP18.04■□□□□ 0.48
FDPS-220ENST00000611010 QTRT2Q9H974 415 aaKnown RBP18.04■□□□□ 0.48
FDPS-220ENST00000611010 KNDC1Q76NI1 1749 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms