RNA–Protein interactions for RNA: ENST00000610468.4

MUC1-222, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-222ENST00000610468 PLEKHG1Q9ULL1 1385 aa21.47■■□□□ 1.03
MUC1-222ENST00000610468 RIMS2Q9UQ26 1411 aa21.44■■□□□ 1.02
MUC1-222ENST00000610468 TMEM131LA2VDJ0 1609 aa21.44■■□□□ 1.02
MUC1-222ENST00000610468 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
MUC1-222ENST00000610468 PROSER2Q86WR7 435 aaPredicted RBP21.43■■□□□ 1.02
MUC1-222ENST00000610468 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
MUC1-222ENST00000610468 SENP3Q9H4L4 574 aaPredicted RBP21.43■■□□□ 1.02
MUC1-222ENST00000610468 IQGAP3Q86VI3 1631 aa21.4■■□□□ 1.02
MUC1-222ENST00000610468 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
MUC1-222ENST00000610468 E9PCH4 1651 aa21.38■■□□□ 1.01
MUC1-222ENST00000610468 RBM33Q96EV2 1170 aaKnown RBP21.38■■□□□ 1.01
MUC1-222ENST00000610468 TBX22Q9Y458 520 aa21.38■■□□□ 1.01
MUC1-222ENST00000610468 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
MUC1-222ENST00000610468 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.37■■□□□ 1.01
MUC1-222ENST00000610468 BCANQ96GW7 911 aa21.37■■□□□ 1.01
MUC1-222ENST00000610468 MSH6P52701 1360 aa21.36■■□□□ 1.01
MUC1-222ENST00000610468 ADAMTS13Q76LX8 1427 aa21.36■■□□□ 1.01
MUC1-222ENST00000610468 NUP155O75694 1391 aa21.36■■□□□ 1.01
MUC1-222ENST00000610468 ROBO1Q9Y6N7 1651 aa21.34■■□□□ 1.01
MUC1-222ENST00000610468 NCOA3Q9Y6Q9 1424 aa21.34■■□□□ 1.01
MUC1-222ENST00000610468 MYO5BQ9ULV0 1848 aa21.34■■□□□ 1.01
MUC1-222ENST00000610468 DIP2AQ14689 1571 aa21.33■■□□□ 1.01
MUC1-222ENST00000610468 RGS17Q9UGC6 210 aaPredicted RBP21.33■■□□□ 1.01
MUC1-222ENST00000610468 PIK3R4Q99570 1358 aa21.33■■□□□ 1
MUC1-222ENST00000610468 SLAIN2Q9P270 581 aa21.31■■□□□ 1
MUC1-222ENST00000610468 CHD2O14647 1828 aaKnown RBP21.31■■□□□ 1
MUC1-222ENST00000610468 CHGAP10645 457 aaKnown RBP21.3■■□□□ 1
MUC1-222ENST00000610468 ITGAEP38570 1179 aa21.28■■□□□ 1
MUC1-222ENST00000610468 NUTM2DQ5VT03 806 aaPredicted RBP21.26■□□□□ 0.99
MUC1-222ENST00000610468 TRPM2O94759 1503 aa21.24■□□□□ 0.99
MUC1-222ENST00000610468 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
MUC1-222ENST00000610468 PTPRUQ92729 1446 aa21.22■□□□□ 0.99
MUC1-222ENST00000610468 PPARGC1BQ86YN6 1023 aaKnown RBP21.22■□□□□ 0.99
MUC1-222ENST00000610468 C19orf44Q9H6X5 657 aa21.22■□□□□ 0.99
MUC1-222ENST00000610468 JCADQ9P266 1359 aa21.22■□□□□ 0.99
MUC1-222ENST00000610468 CADPS2Q86UW7 1296 aa21.21■□□□□ 0.99
MUC1-222ENST00000610468 SETBP1Q9Y6X0 1596 aa21.21■□□□□ 0.99
MUC1-222ENST00000610468 COL16A1Q07092 1604 aaPredicted RBP21.19■□□□□ 0.98
MUC1-222ENST00000610468 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 PHLPP1O60346 1717 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 SPHKAPQ2M3C7 1700 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 POTEAQ6S8J7 498 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 AMOTL2Q9Y2J4 779 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 DCCP43146 1447 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 NAIPQ13075 1403 aa21.18■□□□□ 0.98
MUC1-222ENST00000610468 XRN1Q8IZH2 1706 aaKnown RBP21.16■□□□□ 0.98
MUC1-222ENST00000610468 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.16■□□□□ 0.98
MUC1-222ENST00000610468 AHDC1Q5TGY3 1603 aaPredicted RBP21.16■□□□□ 0.98
MUC1-222ENST00000610468 ATF3P18847 181 aa21.16■□□□□ 0.98
MUC1-222ENST00000610468 METP08581 1390 aa21.13■□□□□ 0.97
MUC1-222ENST00000610468 NEXMIFQ5QGS0 1516 aa21.13■□□□□ 0.97
MUC1-222ENST00000610468 CLTCL1P53675 1640 aa21.12■□□□□ 0.97
MUC1-222ENST00000610468 SPATA31A6Q5VVP1 1343 aa21.12■□□□□ 0.97
MUC1-222ENST00000610468 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
MUC1-222ENST00000610468 BRINP3Q76B58 766 aa21.11■□□□□ 0.97
MUC1-222ENST00000610468 LRP6O75581 1613 aa21.1■□□□□ 0.97
MUC1-222ENST00000610468 HFM1A2PYH4 1435 aa21.1■□□□□ 0.97
MUC1-222ENST00000610468 MST1RQ04912 1400 aa21.08■□□□□ 0.97
MUC1-222ENST00000610468 ASXL1Q8IXJ9 1541 aa21.07■□□□□ 0.96
MUC1-222ENST00000610468 ADGRL3Q9HAR2 1447 aa21.06■□□□□ 0.96
MUC1-222ENST00000610468 SHPRHQ149N8 1683 aa21.05■□□□□ 0.96
MUC1-222ENST00000610468 PRAG1Q86YV5 1406 aa21.04■□□□□ 0.96
MUC1-222ENST00000610468 SETD5Q9C0A6 1442 aa21.04■□□□□ 0.96
MUC1-222ENST00000610468 PTCH1Q13635 1447 aa21.02■□□□□ 0.96
MUC1-222ENST00000610468 VGFO15240 615 aaPredicted RBP21■□□□□ 0.95
MUC1-222ENST00000610468 RPGRIP1LQ68CZ1 1315 aa20.99■□□□□ 0.95
MUC1-222ENST00000610468 NHSL1Q5SYE7 1610 aa20.98■□□□□ 0.95
MUC1-222ENST00000610468 MEX3CQ5U5Q3 659 aaKnown RBP20.98■□□□□ 0.95
MUC1-222ENST00000610468 ZNF772Q68DY9 489 aaPredicted RBP20.98■□□□□ 0.95
MUC1-222ENST00000610468 TRIM52Q96A61 297 aa20.98■□□□□ 0.95
MUC1-222ENST00000610468 SLC4A1APQ9BWU0 796 aaKnown RBP20.98■□□□□ 0.95
MUC1-222ENST00000610468 KIF1BO60333 1816 aa20.97■□□□□ 0.95
MUC1-222ENST00000610468 NALCNQ8IZF0 1738 aa20.97■□□□□ 0.95
MUC1-222ENST00000610468 ROBO2Q9HCK4 1378 aa20.97■□□□□ 0.95
MUC1-222ENST00000610468 SETD1AO15047 1707 aaKnown RBP20.96■□□□□ 0.95
MUC1-222ENST00000610468 C1orf167Q5SNV9 1468 aa20.94■□□□□ 0.94
MUC1-222ENST00000610468 LRRC59Q96AG4 307 aaKnown RBP20.94■□□□□ 0.94
MUC1-222ENST00000610468 PNPLA6Q8IY17 1366 aa20.92■□□□□ 0.94
MUC1-222ENST00000610468 LAMC1P11047 1609 aa20.91■□□□□ 0.94
MUC1-222ENST00000610468 NUTM2BA6NNL0 878 aaPredicted RBP20.9■□□□□ 0.94
MUC1-222ENST00000610468 NUTM2EB1AL46 878 aaPredicted RBP20.9■□□□□ 0.94
MUC1-222ENST00000610468 NUTM2AQ8IVF1 878 aaPredicted RBP20.9■□□□□ 0.94
MUC1-222ENST00000610468 DDX17Q92841 729 aaKnown RBP20.9■□□□□ 0.94
MUC1-222ENST00000610468 CDK12Q9NYV4 1490 aaPredicted RBP20.88■□□□□ 0.93
MUC1-222ENST00000610468 PPLO60437 1756 aa20.88■□□□□ 0.93
MUC1-222ENST00000610468 SPATA31E1Q6ZUB1 1445 aa20.87■□□□□ 0.93
MUC1-222ENST00000610468 AFF2P51816 1311 aa20.87■□□□□ 0.93
MUC1-222ENST00000610468 CCDC144AA2RUR9 1427 aa20.87■□□□□ 0.93
MUC1-222ENST00000610468 SOS2Q07890 1332 aaPredicted RBP20.86■□□□□ 0.93
MUC1-222ENST00000610468 RXRBP28702 533 aa20.86■□□□□ 0.93
MUC1-222ENST00000610468 FOXD1Q16676 465 aa20.86■□□□□ 0.93
MUC1-222ENST00000610468 ORAI2Q96SN7 254 aa20.84■□□□□ 0.93
MUC1-222ENST00000610468 TECPR2O15040 1411 aa20.84■□□□□ 0.93
MUC1-222ENST00000610468 CDC42BPGQ6DT37 1551 aa20.84■□□□□ 0.93
MUC1-222ENST00000610468 ADGRF5Q8IZF2 1346 aa20.83■□□□□ 0.93
MUC1-222ENST00000610468 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
MUC1-222ENST00000610468 UPF1Q92900 1129 aaKnown RBP eCLIP20.82■□□□□ 0.92
MUC1-222ENST00000610468 MPHOSPH9Q99550 1183 aa20.82■□□□□ 0.92
MUC1-222ENST00000610468 C8orf37Q96NL8 207 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms