RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 STRCP1A6NGW2 1772 aa19.08■□□□□ 0.65
CD9-212ENST00000610354 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.65
CD9-212ENST00000610354 EID1Q9Y6B2 187 aa19.08■□□□□ 0.65
CD9-212ENST00000610354 RAB3GAP2Q9H2M9 1393 aa19.08■□□□□ 0.64
CD9-212ENST00000610354 TRPM2O94759 1503 aa19.08■□□□□ 0.64
CD9-212ENST00000610354 RIMS2Q9UQ26 1411 aa19.07■□□□□ 0.64
CD9-212ENST00000610354 FBXO41Q8TF61 875 aa19.06■□□□□ 0.64
CD9-212ENST00000610354 MPHOSPH9Q99550 1183 aa19.06■□□□□ 0.64
CD9-212ENST00000610354 NUTM2DQ5VT03 806 aaPredicted RBP19.01■□□□□ 0.63
CD9-212ENST00000610354 KIF1BO60333 1816 aa19.01■□□□□ 0.63
CD9-212ENST00000610354 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
CD9-212ENST00000610354 IQSEC2Q5JU85 1478 aa19■□□□□ 0.63
CD9-212ENST00000610354 PLEKHG1Q9ULL1 1385 aa19■□□□□ 0.63
CD9-212ENST00000610354 CPS1P31327 1500 aa18.99■□□□□ 0.63
CD9-212ENST00000610354 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.97■□□□□ 0.63
CD9-212ENST00000610354 ADAMTS13Q76LX8 1427 aa18.96■□□□□ 0.63
CD9-212ENST00000610354 HRCP23327 699 aa18.96■□□□□ 0.63
CD9-212ENST00000610354 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
CD9-212ENST00000610354 NEXMIFQ5QGS0 1516 aa18.95■□□□□ 0.62
CD9-212ENST00000610354 ACIN1Q9UKV3 1341 aaKnown RBP18.95■□□□□ 0.62
CD9-212ENST00000610354 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
CD9-212ENST00000610354 LRRC7Q96NW7 1537 aa18.95■□□□□ 0.62
CD9-212ENST00000610354 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
CD9-212ENST00000610354 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
CD9-212ENST00000610354 NRXN3Q9Y4C0 1643 aa18.94■□□□□ 0.62
CD9-212ENST00000610354 BCANQ96GW7 911 aa18.93■□□□□ 0.62
CD9-212ENST00000610354 KCNA6P17658 529 aa18.92■□□□□ 0.62
CD9-212ENST00000610354 CHD2O14647 1828 aaKnown RBP18.92■□□□□ 0.62
CD9-212ENST00000610354 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
CD9-212ENST00000610354 NWD1Q149M9 1564 aa18.91■□□□□ 0.62
CD9-212ENST00000610354 PPLO60437 1756 aa18.89■□□□□ 0.61
CD9-212ENST00000610354 ALKQ9UM73 1620 aa18.89■□□□□ 0.61
CD9-212ENST00000610354 CCDC144AA2RUR9 1427 aa18.89■□□□□ 0.61
CD9-212ENST00000610354 SPATA31E1Q6ZUB1 1445 aa18.89■□□□□ 0.61
CD9-212ENST00000610354 SETBP1Q9Y6X0 1596 aa18.88■□□□□ 0.61
CD9-212ENST00000610354 DIP2AQ14689 1571 aa18.87■□□□□ 0.61
CD9-212ENST00000610354 ANKRD30BQ9BXX2 1392 aa18.86■□□□□ 0.61
CD9-212ENST00000610354 UBAP1LF5GYI3 381 aa18.86■□□□□ 0.61
CD9-212ENST00000610354 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
CD9-212ENST00000610354 RPGRIP1LQ68CZ1 1315 aa18.85■□□□□ 0.61
CD9-212ENST00000610354 IFT172Q9UG01 1749 aa18.85■□□□□ 0.61
CD9-212ENST00000610354 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
CD9-212ENST00000610354 RGL3Q3MIN7 710 aa18.83■□□□□ 0.61
CD9-212ENST00000610354 TMEM94Q12767 1356 aa18.83■□□□□ 0.6
CD9-212ENST00000610354 SETD1AO15047 1707 aaKnown RBP18.83■□□□□ 0.6
CD9-212ENST00000610354 NKTRP30414 1462 aaKnown RBP18.82■□□□□ 0.6
CD9-212ENST00000610354 PROSER2Q86WR7 435 aaPredicted RBP18.82■□□□□ 0.6
CD9-212ENST00000610354 METP08581 1390 aa18.82■□□□□ 0.6
CD9-212ENST00000610354 PIK3R4Q99570 1358 aa18.82■□□□□ 0.6
CD9-212ENST00000610354 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
CD9-212ENST00000610354 ADGRF5Q8IZF2 1346 aa18.8■□□□□ 0.6
CD9-212ENST00000610354 XRN1Q8IZH2 1706 aaKnown RBP18.79■□□□□ 0.6
CD9-212ENST00000610354 AMOTL2Q9Y2J4 779 aa18.78■□□□□ 0.6
CD9-212ENST00000610354 TOM1O60784 492 aa18.77■□□□□ 0.6
CD9-212ENST00000610354 PIP4K2BP78356 416 aa18.75■□□□□ 0.59
CD9-212ENST00000610354 TRIM26Q12899 539 aaPredicted RBP18.74■□□□□ 0.59
CD9-212ENST00000610354 NRXN1Q9ULB1 1477 aa18.72■□□□□ 0.59
CD9-212ENST00000610354 PIK3C2GO75747 1445 aa18.71■□□□□ 0.59
CD9-212ENST00000610354 NCOA3Q9Y6Q9 1424 aa18.71■□□□□ 0.59
CD9-212ENST00000610354 SCAF1Q9H7N4 1312 aaKnown RBP18.7■□□□□ 0.58
CD9-212ENST00000610354 ASXL1Q8IXJ9 1541 aa18.7■□□□□ 0.58
CD9-212ENST00000610354 DHX57Q6P158 1386 aaKnown RBP18.69■□□□□ 0.58
CD9-212ENST00000610354 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
CD9-212ENST00000610354 MYOM2P54296 1465 aa18.69■□□□□ 0.58
CD9-212ENST00000610354 HSPA1LP34931 641 aa18.68■□□□□ 0.58
CD9-212ENST00000610354 MSH6P52701 1360 aa18.68■□□□□ 0.58
CD9-212ENST00000610354 ROBO2Q9HCK4 1378 aa18.67■□□□□ 0.58
CD9-212ENST00000610354 PRAG1Q86YV5 1406 aa18.66■□□□□ 0.58
CD9-212ENST00000610354 TMEM132EQ6IEE7 984 aa18.65■□□□□ 0.58
CD9-212ENST00000610354 C14orf93Q9H972 538 aaKnown RBP18.65■□□□□ 0.58
CD9-212ENST00000610354 PTCH1Q13635 1447 aa18.64■□□□□ 0.57
CD9-212ENST00000610354 CFAP70Q5T0N1 1121 aa18.64■□□□□ 0.57
CD9-212ENST00000610354 DCAF11Q8TEB1 546 aa18.64■□□□□ 0.57
CD9-212ENST00000610354 C19orf44Q9H6X5 657 aa18.64■□□□□ 0.57
CD9-212ENST00000610354 NALCNQ8IZF0 1738 aa18.63■□□□□ 0.57
CD9-212ENST00000610354 FAM135BQ49AJ0 1406 aa18.63■□□□□ 0.57
CD9-212ENST00000610354 C14orf37Q86TY3 774 aa18.63■□□□□ 0.57
CD9-212ENST00000610354 KDM2AQ9Y2K7 1162 aa18.63■□□□□ 0.57
CD9-212ENST00000610354 SLAIN2Q9P270 581 aa18.62■□□□□ 0.57
CD9-212ENST00000610354 ROBO1Q9Y6N7 1651 aa18.62■□□□□ 0.57
CD9-212ENST00000610354 LRPPRCP42704 1394 aaKnown RBP18.61■□□□□ 0.57
CD9-212ENST00000610354 SIN3AQ96ST3 1273 aa18.61■□□□□ 0.57
CD9-212ENST00000610354 STK26Q9P289 416 aa18.6■□□□□ 0.57
CD9-212ENST00000610354 KNDC1Q76NI1 1749 aa18.6■□□□□ 0.57
CD9-212ENST00000610354 TECPR2O15040 1411 aa18.6■□□□□ 0.57
CD9-212ENST00000610354 ADGRL3Q9HAR2 1447 aa18.6■□□□□ 0.57
CD9-212ENST00000610354 LAMC1P11047 1609 aa18.6■□□□□ 0.57
CD9-212ENST00000610354 YTHDC2Q9H6S0 1430 aaKnown RBP18.59■□□□□ 0.57
CD9-212ENST00000610354 ABCC11Q96J66 1382 aa18.59■□□□□ 0.57
CD9-212ENST00000610354 DCCP43146 1447 aa18.58■□□□□ 0.56
CD9-212ENST00000610354 ATF3P18847 181 aa18.57■□□□□ 0.56
CD9-212ENST00000610354 WAPLQ7Z5K2 1190 aa18.57■□□□□ 0.56
CD9-212ENST00000610354 CADPS2Q86UW7 1296 aa18.57■□□□□ 0.56
CD9-212ENST00000610354 ADGRB1O14514 1584 aa18.57■□□□□ 0.56
CD9-212ENST00000610354 PLEKHH1Q9ULM0 1364 aa18.57■□□□□ 0.56
CD9-212ENST00000610354 MST1RQ04912 1400 aa18.55■□□□□ 0.56
CD9-212ENST00000610354 STAC3Q96MF2 364 aa18.55■□□□□ 0.56
CD9-212ENST00000610354 SIRT1Q96EB6 747 aa18.52■□□□□ 0.56
CD9-212ENST00000610354 NEUROD1Q13562 356 aa18.51■□□□□ 0.55
CD9-212ENST00000610354 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms