RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 RRP12Q5JTH9 1297 aaKnown RBP15.95■□□□□ 0.14
USP6NL-205ENST00000609104 RUFY2Q8WXA3 655 aa15.95■□□□□ 0.14
USP6NL-205ENST00000609104 HOOK1Q9UJC3 728 aaKnown RBP15.95■□□□□ 0.14
USP6NL-205ENST00000609104 EID1Q9Y6B2 187 aa15.95■□□□□ 0.14
USP6NL-205ENST00000609104 C9orf78Q9NZ63 289 aaPredicted RBP15.95■□□□□ 0.14
USP6NL-205ENST00000609104 CALRP27797 417 aaKnown RBP15.94■□□□□ 0.14
USP6NL-205ENST00000609104 EIF2S2P20042 333 aaKnown RBP15.94■□□□□ 0.14
USP6NL-205ENST00000609104 REC8O95072 547 aa15.94■□□□□ 0.14
USP6NL-205ENST00000609104 LRRFIP1Q32MZ4 808 aaKnown RBP15.94■□□□□ 0.14
USP6NL-205ENST00000609104 RUFY1Q96T51 708 aa15.94■□□□□ 0.14
USP6NL-205ENST00000609104 ZKSCAN1P17029 563 aaPredicted RBP15.93■□□□□ 0.14
USP6NL-205ENST00000609104 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
USP6NL-205ENST00000609104 NAP1L1P55209 391 aaKnown RBP15.93■□□□□ 0.14
USP6NL-205ENST00000609104 CCDC47Q96A33 483 aaKnown RBP15.93■□□□□ 0.14
USP6NL-205ENST00000609104 ST20-MTHFSA0A0A6YYL1 179 aa15.93■□□□□ 0.14
USP6NL-205ENST00000609104 NACADO15069 1562 aa15.93■□□□□ 0.14
USP6NL-205ENST00000609104 TRIM34Q9BYJ4 488 aa15.93■□□□□ 0.14
USP6NL-205ENST00000609104 CARMIL2Q6F5E8 1435 aa15.92■□□□□ 0.14
USP6NL-205ENST00000609104 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.92■□□□□ 0.14
USP6NL-205ENST00000609104 AMOTL1Q8IY63 956 aa15.92■□□□□ 0.14
USP6NL-205ENST00000609104 CPLX1O14810 134 aa15.92■□□□□ 0.14
USP6NL-205ENST00000609104 IFT57Q9NWB7 429 aa15.92■□□□□ 0.14
USP6NL-205ENST00000609104 FAM43AQ8N2R8 423 aa15.92■□□□□ 0.14
USP6NL-205ENST00000609104 CHMP5Q9NZZ3 219 aa15.91■□□□□ 0.14
USP6NL-205ENST00000609104 NOL10Q9BSC4 688 aaKnown RBP15.91■□□□□ 0.14
USP6NL-205ENST00000609104 AK7Q96M32 723 aa15.91■□□□□ 0.14
USP6NL-205ENST00000609104 EVA1CP58658 441 aa15.91■□□□□ 0.14
USP6NL-205ENST00000609104 WASHC2CQ9Y4E1 1318 aa15.91■□□□□ 0.14
USP6NL-205ENST00000609104 IFIT2P09913 472 aaKnown RBP15.91■□□□□ 0.14
USP6NL-205ENST00000609104 NFXL1Q6ZNB6 911 aa15.91■□□□□ 0.14
USP6NL-205ENST00000609104 VPS37CA5D8V6 355 aaPredicted RBP15.9■□□□□ 0.14
USP6NL-205ENST00000609104 EFCAB2Q5VUJ9 269 aa15.9■□□□□ 0.14
USP6NL-205ENST00000609104 SMC3Q9UQE7 1217 aa15.9■□□□□ 0.14
USP6NL-205ENST00000609104 NEXNQ0ZGT2 675 aa15.89■□□□□ 0.13
USP6NL-205ENST00000609104 TRDNQ13061 729 aa15.89■□□□□ 0.13
USP6NL-205ENST00000609104 ZBED9Q6R2W3 1325 aa15.89■□□□□ 0.13
USP6NL-205ENST00000609104 CTDP1Q9Y5B0 961 aaPredicted RBP15.89■□□□□ 0.13
USP6NL-205ENST00000609104 DHX16O60231 1041 aaKnown RBP15.89■□□□□ 0.13
USP6NL-205ENST00000609104 COG3Q96JB2 828 aa15.88■□□□□ 0.13
USP6NL-205ENST00000609104 TEFQ10587 303 aa15.88■□□□□ 0.13
USP6NL-205ENST00000609104 DDX19BQ9UMR2 479 aa15.88■□□□□ 0.13
USP6NL-205ENST00000609104 NOM1Q5C9Z4 860 aaKnown RBP15.88■□□□□ 0.13
USP6NL-205ENST00000609104 VPS37DQ86XT2 251 aa15.88■□□□□ 0.13
USP6NL-205ENST00000609104 MNS1Q8NEH6 495 aa15.87■□□□□ 0.13
USP6NL-205ENST00000609104 RNF20Q5VTR2 975 aa15.87■□□□□ 0.13
USP6NL-205ENST00000609104 APAF1O14727 1248 aa15.87■□□□□ 0.13
USP6NL-205ENST00000609104 CGNL1Q0VF96 1302 aa15.87■□□□□ 0.13
USP6NL-205ENST00000609104 FANCIQ9NVI1 1328 aa15.87■□□□□ 0.13
USP6NL-205ENST00000609104 R3HCC1Q9Y3T6 440 aaKnown RBP15.87■□□□□ 0.13
USP6NL-205ENST00000609104 ERICH2A1L162 156 aa15.86■□□□□ 0.13
USP6NL-205ENST00000609104 ARGLU1Q9NWB6 273 aaPredicted RBP15.86■□□□□ 0.13
USP6NL-205ENST00000609104 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
USP6NL-205ENST00000609104 NUCB2P80303 420 aa15.85■□□□□ 0.13
USP6NL-205ENST00000609104 PDILTQ8N807 584 aa15.85■□□□□ 0.13
USP6NL-205ENST00000609104 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
USP6NL-205ENST00000609104 TTLL5Q6EMB2 1281 aa15.84■□□□□ 0.13
USP6NL-205ENST00000609104 MSH5O43196 834 aa15.84■□□□□ 0.13
USP6NL-205ENST00000609104 ODF2Q5BJF6 829 aa15.84■□□□□ 0.13
USP6NL-205ENST00000609104 LNPKQ9C0E8 428 aa15.83■□□□□ 0.13
USP6NL-205ENST00000609104 TTC5Q8N0Z6 440 aa15.83■□□□□ 0.13
USP6NL-205ENST00000609104 CNKSR2Q8WXI2 1034 aa15.83■□□□□ 0.13
USP6NL-205ENST00000609104 CT47A1Q5JQC4 288 aaPredicted RBP15.83■□□□□ 0.13
USP6NL-205ENST00000609104 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
USP6NL-205ENST00000609104 ACBD3Q9H3P7 528 aa15.83■□□□□ 0.12
USP6NL-205ENST00000609104 EPS15P42566 896 aa15.83■□□□□ 0.12
USP6NL-205ENST00000609104 RIPK4P57078 832 aa15.83■□□□□ 0.12
USP6NL-205ENST00000609104 NASPP49321 788 aaPredicted RBP15.83■□□□□ 0.12
USP6NL-205ENST00000609104 G3BP1Q13283 466 aaKnown RBP eCLIP15.83■□□□□ 0.12
USP6NL-205ENST00000609104 PRKRIP1Q9H875 184 aaPredicted RBP15.82■□□□□ 0.12
USP6NL-205ENST00000609104 SKIDA1Q1XH10 827 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 C22orf23Q9BZE7 217 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 EVC2Q86UK5 1308 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 HSP90B2PQ58FF3 399 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC43Q96MW1 224 aaKnown RBP15.82■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC144AA2RUR9 1427 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 CDR1P51861 262 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 ROCK1Q13464 1354 aa15.82■□□□□ 0.12
USP6NL-205ENST00000609104 KDM4AO75164 1064 aa15.81■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC73Q6ZRK6 1079 aa15.81■□□□□ 0.12
USP6NL-205ENST00000609104 SAMD1Q6SPF0 538 aaPredicted RBP15.81■□□□□ 0.12
USP6NL-205ENST00000609104 SAFBQ15424 915 aaKnown RBP eCLIP15.81■□□□□ 0.12
USP6NL-205ENST00000609104 CAGE1Q8TC20 777 aa15.81■□□□□ 0.12
USP6NL-205ENST00000609104 NFKBIBQ15653 356 aa15.8■□□□□ 0.12
USP6NL-205ENST00000609104 FKBP5Q13451 457 aaPredicted RBP15.8■□□□□ 0.12
USP6NL-205ENST00000609104 HSP90AB2PQ58FF8 381 aa15.8■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC18Q5T9S5 1454 aa15.8■□□□□ 0.12
USP6NL-205ENST00000609104 ZFYVE27Q5T4F4 411 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 RNF214Q8ND24 703 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.79■□□□□ 0.126e-7■■■■■ 80.5
USP6NL-205ENST00000609104 NAT10Q9H0A0 1025 aaKnown RBP15.79■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC39Q9UFE4 941 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 PRDM2Q13029 1718 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 DDX58O95786 925 aaKnown RBP15.79■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC27Q2M243 656 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 USP47Q96K76 1375 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 FYB1O15117 783 aa15.79■□□□□ 0.12
USP6NL-205ENST00000609104 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
USP6NL-205ENST00000609104 SYTL4Q96C24 671 aaPredicted RBP15.79■□□□□ 0.12
USP6NL-205ENST00000609104 CCDC88BA6NC98 1476 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms