RNA–Protein interactions for RNA: ENST00000608703.1

HSPA1A-202, Transcript of heat shock protein family A (Hsp70) member 1A, humanhuman

TSL 2 BASIC

Gene HSPA1A, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA1A-202ENST00000608703 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.86■■□□□ 1.73
HSPA1A-202ENST00000608703 PPP1R15AO75807 674 aaPredicted RBP25.84■■□□□ 1.73
HSPA1A-202ENST00000608703 ANKRD30BQ9BXX2 1392 aa25.84■■□□□ 1.73
HSPA1A-202ENST00000608703 RIMS2Q9UQ26 1411 aa25.84■■□□□ 1.73
HSPA1A-202ENST00000608703 MED14O60244 1454 aa25.84■■□□□ 1.73
HSPA1A-202ENST00000608703 NPHP4O75161 1426 aaPredicted RBP25.84■■□□□ 1.73
HSPA1A-202ENST00000608703 NEURL4Q96JN8 1562 aa25.82■■□□□ 1.72
HSPA1A-202ENST00000608703 ZFYVE9O95405 1425 aa25.81■■□□□ 1.72
HSPA1A-202ENST00000608703 BCANQ96GW7 911 aa25.8■■□□□ 1.72
HSPA1A-202ENST00000608703 NUTM2DQ5VT03 806 aaPredicted RBP25.79■■□□□ 1.72
HSPA1A-202ENST00000608703 RPGRIP1LQ68CZ1 1315 aa25.78■■□□□ 1.72
HSPA1A-202ENST00000608703 RGL3Q3MIN7 710 aa25.78■■□□□ 1.72
HSPA1A-202ENST00000608703 IQGAP1P46940 1657 aa25.77■■□□□ 1.72
HSPA1A-202ENST00000608703 VGFO15240 615 aaPredicted RBP25.74■■□□□ 1.71
HSPA1A-202ENST00000608703 DHX57Q6P158 1386 aaKnown RBP25.73■■□□□ 1.71
HSPA1A-202ENST00000608703 PLEKHG1Q9ULL1 1385 aa25.73■■□□□ 1.71
HSPA1A-202ENST00000608703 SPATA31E1Q6ZUB1 1445 aa25.73■■□□□ 1.71
HSPA1A-202ENST00000608703 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
HSPA1A-202ENST00000608703 SLC26A8Q96RN1 970 aa25.71■■□□□ 1.71
HSPA1A-202ENST00000608703 NEXMIFQ5QGS0 1516 aa25.69■■□□□ 1.7
HSPA1A-202ENST00000608703 ZNF335Q9H4Z2 1342 aaPredicted RBP25.68■■□□□ 1.7
HSPA1A-202ENST00000608703 TBX22Q9Y458 520 aa25.65■■□□□ 1.7
HSPA1A-202ENST00000608703 PPLO60437 1756 aa25.62■■□□□ 1.69
HSPA1A-202ENST00000608703 SCAF1Q9H7N4 1312 aaKnown RBP25.6■■□□□ 1.69
HSPA1A-202ENST00000608703 SIN3AQ96ST3 1273 aa25.59■■□□□ 1.69
HSPA1A-202ENST00000608703 ADAMTS13Q76LX8 1427 aa25.59■■□□□ 1.69
HSPA1A-202ENST00000608703 DCAF11Q8TEB1 546 aa25.59■■□□□ 1.69
HSPA1A-202ENST00000608703 NEUROD1Q13562 356 aa25.58■■□□□ 1.69
HSPA1A-202ENST00000608703 STAC3Q96MF2 364 aa25.58■■□□□ 1.69
HSPA1A-202ENST00000608703 ADGRF5Q8IZF2 1346 aa25.58■■□□□ 1.68
HSPA1A-202ENST00000608703 SETBP1Q9Y6X0 1596 aa25.57■■□□□ 1.68
HSPA1A-202ENST00000608703 LTBP4Q8N2S1 1624 aa25.57■■□□□ 1.68
HSPA1A-202ENST00000608703 KCNA6P17658 529 aa25.57■■□□□ 1.68
HSPA1A-202ENST00000608703 CERKQ8TCT0 537 aa25.57■■□□□ 1.68
HSPA1A-202ENST00000608703 DIP2AQ14689 1571 aa25.57■■□□□ 1.68
HSPA1A-202ENST00000608703 KDM2AQ9Y2K7 1162 aa25.56■■□□□ 1.68
HSPA1A-202ENST00000608703 IFT172Q9UG01 1749 aa25.55■■□□□ 1.68
HSPA1A-202ENST00000608703 PIK3R4Q99570 1358 aa25.54■■□□□ 1.68
HSPA1A-202ENST00000608703 CPS1P31327 1500 aa25.53■■□□□ 1.68
HSPA1A-202ENST00000608703 NRXN3Q9Y4C0 1643 aa25.52■■□□□ 1.68
HSPA1A-202ENST00000608703 MYOM2P54296 1465 aa25.51■■□□□ 1.67
HSPA1A-202ENST00000608703 AMOTL2Q9Y2J4 779 aa25.48■■□□□ 1.67
HSPA1A-202ENST00000608703 ALKQ9UM73 1620 aa25.48■■□□□ 1.67
HSPA1A-202ENST00000608703 CHD2O14647 1828 aaKnown RBP25.48■■□□□ 1.67
HSPA1A-202ENST00000608703 STRCP1A6NGW2 1772 aa25.48■■□□□ 1.67
HSPA1A-202ENST00000608703 PIK3C2GO75747 1445 aa25.48■■□□□ 1.67
HSPA1A-202ENST00000608703 METP08581 1390 aa25.47■■□□□ 1.67
HSPA1A-202ENST00000608703 PROSER2Q86WR7 435 aaPredicted RBP25.46■■□□□ 1.67
HSPA1A-202ENST00000608703 NRXN1Q9ULB1 1477 aa25.45■■□□□ 1.67
HSPA1A-202ENST00000608703 L3MBTL2Q969R5 705 aa25.45■■□□□ 1.67
HSPA1A-202ENST00000608703 C14orf93Q9H972 538 aaKnown RBP25.45■■□□□ 1.66
HSPA1A-202ENST00000608703 CLSPNQ9HAW4 1339 aa25.44■■□□□ 1.66
HSPA1A-202ENST00000608703 CCER1Q8TC90 406 aaPredicted RBP25.44■■□□□ 1.66
HSPA1A-202ENST00000608703 NWD1Q149M9 1564 aa25.43■■□□□ 1.66
HSPA1A-202ENST00000608703 LRRC7Q96NW7 1537 aa25.42■■□□□ 1.66
HSPA1A-202ENST00000608703 CFAP70Q5T0N1 1121 aa25.42■■□□□ 1.66
HSPA1A-202ENST00000608703 NKTRP30414 1462 aaKnown RBP25.42■■□□□ 1.66
HSPA1A-202ENST00000608703 IQSEC2Q5JU85 1478 aa25.42■■□□□ 1.66
HSPA1A-202ENST00000608703 PTPRUQ92729 1446 aa25.42■■□□□ 1.66
HSPA1A-202ENST00000608703 TONSLQ96HA7 1378 aa25.4■■□□□ 1.66
HSPA1A-202ENST00000608703 SETD1AO15047 1707 aaKnown RBP25.39■■□□□ 1.66
HSPA1A-202ENST00000608703 TMEM132EQ6IEE7 984 aa25.38■■□□□ 1.65
HSPA1A-202ENST00000608703 TMEM94Q12767 1356 aa25.38■■□□□ 1.65
HSPA1A-202ENST00000608703 RBM33Q96EV2 1170 aaKnown RBP25.36■■□□□ 1.65
HSPA1A-202ENST00000608703 LAMC1P11047 1609 aa25.36■■□□□ 1.65
HSPA1A-202ENST00000608703 STK26Q9P289 416 aa25.35■■□□□ 1.65
HSPA1A-202ENST00000608703 C14orf37Q86TY3 774 aa25.33■■□□□ 1.65
HSPA1A-202ENST00000608703 XRN1Q8IZH2 1706 aaKnown RBP25.33■■□□□ 1.65
HSPA1A-202ENST00000608703 PRAG1Q86YV5 1406 aa25.32■■□□□ 1.64
HSPA1A-202ENST00000608703 NCOA3Q9Y6Q9 1424 aa25.32■■□□□ 1.64
HSPA1A-202ENST00000608703 LRPPRCP42704 1394 aaKnown RBP25.32■■□□□ 1.64
HSPA1A-202ENST00000608703 TOM1O60784 492 aa25.31■■□□□ 1.64
HSPA1A-202ENST00000608703 FBXO41Q8TF61 875 aa25.31■■□□□ 1.64
HSPA1A-202ENST00000608703 UBAP1LF5GYI3 381 aa25.31■■□□□ 1.64
HSPA1A-202ENST00000608703 YTHDC2Q9H6S0 1430 aaKnown RBP25.3■■□□□ 1.64
HSPA1A-202ENST00000608703 ABCC11Q96J66 1382 aa25.3■■□□□ 1.64
HSPA1A-202ENST00000608703 XIRP1Q702N8 1843 aaKnown RBP25.28■■□□□ 1.64
HSPA1A-202ENST00000608703 PTCH1Q13635 1447 aa25.28■■□□□ 1.64
HSPA1A-202ENST00000608703 MSH6P52701 1360 aa25.28■■□□□ 1.64
HSPA1A-202ENST00000608703 TIMELESSQ9UNS1 1208 aa25.27■■□□□ 1.64
HSPA1A-202ENST00000608703 ASXL1Q8IXJ9 1541 aa25.27■■□□□ 1.64
HSPA1A-202ENST00000608703 MYT1Q01538 1121 aa25.27■■□□□ 1.64
HSPA1A-202ENST00000608703 ROBO2Q9HCK4 1378 aa25.27■■□□□ 1.64
HSPA1A-202ENST00000608703 C19orf44Q9H6X5 657 aa25.26■■□□□ 1.63
HSPA1A-202ENST00000608703 TECPR2O15040 1411 aa25.25■■□□□ 1.63
HSPA1A-202ENST00000608703 CENPBP07199 599 aaPredicted RBP25.25■■□□□ 1.63
HSPA1A-202ENST00000608703 SIRT1Q96EB6 747 aa25.25■■□□□ 1.63
HSPA1A-202ENST00000608703 ADGRB1O14514 1584 aa25.24■■□□□ 1.63
HSPA1A-202ENST00000608703 KIAA1210Q9ULL0 1709 aa25.24■■□□□ 1.63
HSPA1A-202ENST00000608703 NBPF1Q3BBV0 1214 aa25.23■■□□□ 1.63
HSPA1A-202ENST00000608703 TRAK1Q9UPV9 953 aa25.23■■□□□ 1.63
HSPA1A-202ENST00000608703 WAPLQ7Z5K2 1190 aa25.22■■□□□ 1.63
HSPA1A-202ENST00000608703 ATF3P18847 181 aa25.21■■□□□ 1.63
HSPA1A-202ENST00000608703 KNDC1Q76NI1 1749 aa25.2■■□□□ 1.63
HSPA1A-202ENST00000608703 NBPF8Q3BBV2 869 aa25.2■■□□□ 1.62
HSPA1A-202ENST00000608703 CADPS2Q86UW7 1296 aa25.2■■□□□ 1.62
HSPA1A-202ENST00000608703 FAM135BQ49AJ0 1406 aa25.19■■□□□ 1.62
HSPA1A-202ENST00000608703 POGKQ9P215 609 aa25.19■■□□□ 1.62
HSPA1A-202ENST00000608703 PIP4K2BP78356 416 aa25.18■■□□□ 1.62
HSPA1A-202ENST00000608703 PRAM1Q96QH2 718 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms