RNA–Protein interactions for RNA: ENST00000608669.1

LINC00963-212, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 531 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-212ENST00000608669 RGL3Q3MIN7 710 aa17.97■□□□□ 0.47
LINC00963-212ENST00000608669 NEXMIFQ5QGS0 1516 aa17.97■□□□□ 0.47
LINC00963-212ENST00000608669 DHX57Q6P158 1386 aaKnown RBP17.96■□□□□ 0.47
LINC00963-212ENST00000608669 ANKRD30BQ9BXX2 1392 aa17.96■□□□□ 0.47
LINC00963-212ENST00000608669 PPP1R15AO75807 674 aaPredicted RBP17.95■□□□□ 0.46
LINC00963-212ENST00000608669 HRCP23327 699 aa17.95■□□□□ 0.46
LINC00963-212ENST00000608669 PPLO60437 1756 aa17.94■□□□□ 0.46
LINC00963-212ENST00000608669 BCANQ96GW7 911 aa17.94■□□□□ 0.46
LINC00963-212ENST00000608669 ZNF335Q9H4Z2 1342 aaPredicted RBP17.93■□□□□ 0.46
LINC00963-212ENST00000608669 IFT172Q9UG01 1749 aa17.92■□□□□ 0.46
LINC00963-212ENST00000608669 STRCP1A6NGW2 1772 aa17.92■□□□□ 0.46
LINC00963-212ENST00000608669 SPATA31E1Q6ZUB1 1445 aa17.92■□□□□ 0.46
LINC00963-212ENST00000608669 SLC26A8Q96RN1 970 aa17.92■□□□□ 0.46
LINC00963-212ENST00000608669 EID1Q9Y6B2 187 aa17.92■□□□□ 0.46
LINC00963-212ENST00000608669 MED14O60244 1454 aa17.91■□□□□ 0.46
LINC00963-212ENST00000608669 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
LINC00963-212ENST00000608669 SIN3AQ96ST3 1273 aa17.9■□□□□ 0.46
LINC00963-212ENST00000608669 ACIN1Q9UKV3 1341 aaKnown RBP17.88■□□□□ 0.45
LINC00963-212ENST00000608669 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
LINC00963-212ENST00000608669 ADAMTS13Q76LX8 1427 aa17.85■□□□□ 0.45
LINC00963-212ENST00000608669 LTBP4Q8N2S1 1624 aa17.85■□□□□ 0.45
LINC00963-212ENST00000608669 PLEKHG1Q9ULL1 1385 aa17.85■□□□□ 0.45
LINC00963-212ENST00000608669 DMRT2Q9Y5R5 561 aa17.85■□□□□ 0.45
LINC00963-212ENST00000608669 ADGRF5Q8IZF2 1346 aa17.84■□□□□ 0.45
LINC00963-212ENST00000608669 SETD1AO15047 1707 aaKnown RBP17.83■□□□□ 0.44
LINC00963-212ENST00000608669 RBM33Q96EV2 1170 aaKnown RBP17.82■□□□□ 0.44
LINC00963-212ENST00000608669 KDM2AQ9Y2K7 1162 aa17.82■□□□□ 0.44
LINC00963-212ENST00000608669 SETBP1Q9Y6X0 1596 aa17.82■□□□□ 0.44
LINC00963-212ENST00000608669 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.81■□□□□ 0.44
LINC00963-212ENST00000608669 ALKQ9UM73 1620 aa17.78■□□□□ 0.44
LINC00963-212ENST00000608669 PTPRUQ92729 1446 aa17.78■□□□□ 0.44
LINC00963-212ENST00000608669 METP08581 1390 aa17.78■□□□□ 0.44
LINC00963-212ENST00000608669 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
LINC00963-212ENST00000608669 DCAF11Q8TEB1 546 aa17.77■□□□□ 0.44
LINC00963-212ENST00000608669 CHD2O14647 1828 aaKnown RBP17.77■□□□□ 0.43
LINC00963-212ENST00000608669 DIP2AQ14689 1571 aa17.76■□□□□ 0.43
LINC00963-212ENST00000608669 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
LINC00963-212ENST00000608669 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
LINC00963-212ENST00000608669 XIRP1Q702N8 1843 aaKnown RBP17.76■□□□□ 0.43
LINC00963-212ENST00000608669 MYOM2P54296 1465 aa17.75■□□□□ 0.43
LINC00963-212ENST00000608669 RPGRIP1LQ68CZ1 1315 aa17.74■□□□□ 0.43
LINC00963-212ENST00000608669 PIK3C2GO75747 1445 aa17.74■□□□□ 0.43
LINC00963-212ENST00000608669 VGFO15240 615 aaPredicted RBP17.74■□□□□ 0.43
LINC00963-212ENST00000608669 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
LINC00963-212ENST00000608669 LRRC7Q96NW7 1537 aa17.72■□□□□ 0.43
LINC00963-212ENST00000608669 TMEM132EQ6IEE7 984 aa17.72■□□□□ 0.43
LINC00963-212ENST00000608669 CERKQ8TCT0 537 aa17.72■□□□□ 0.43
LINC00963-212ENST00000608669 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
LINC00963-212ENST00000608669 KCNA6P17658 529 aa17.71■□□□□ 0.43
LINC00963-212ENST00000608669 CFAP70Q5T0N1 1121 aa17.71■□□□□ 0.43
LINC00963-212ENST00000608669 CPS1P31327 1500 aa17.71■□□□□ 0.43
LINC00963-212ENST00000608669 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
LINC00963-212ENST00000608669 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
LINC00963-212ENST00000608669 STK26Q9P289 416 aa17.69■□□□□ 0.42
LINC00963-212ENST00000608669 TBX22Q9Y458 520 aa17.69■□□□□ 0.42
LINC00963-212ENST00000608669 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
LINC00963-212ENST00000608669 TMEM94Q12767 1356 aa17.66■□□□□ 0.42
LINC00963-212ENST00000608669 LAMC1P11047 1609 aa17.66■□□□□ 0.42
LINC00963-212ENST00000608669 PROSER2Q86WR7 435 aaPredicted RBP17.66■□□□□ 0.42
LINC00963-212ENST00000608669 NKTRP30414 1462 aaKnown RBP17.66■□□□□ 0.42
LINC00963-212ENST00000608669 TONSLQ96HA7 1378 aa17.65■□□□□ 0.42
LINC00963-212ENST00000608669 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.42
LINC00963-212ENST00000608669 NALCNQ8IZF0 1738 aa17.64■□□□□ 0.41
LINC00963-212ENST00000608669 ADGRB1O14514 1584 aa17.63■□□□□ 0.41
LINC00963-212ENST00000608669 ROBO2Q9HCK4 1378 aa17.63■□□□□ 0.41
LINC00963-212ENST00000608669 PLEKHH1Q9ULM0 1364 aa17.62■□□□□ 0.41
LINC00963-212ENST00000608669 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
LINC00963-212ENST00000608669 KNDC1Q76NI1 1749 aa17.61■□□□□ 0.41
LINC00963-212ENST00000608669 NBPF1Q3BBV0 1214 aa17.61■□□□□ 0.41
LINC00963-212ENST00000608669 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
LINC00963-212ENST00000608669 C14orf93Q9H972 538 aaKnown RBP17.61■□□□□ 0.41
LINC00963-212ENST00000608669 PIK3R4Q99570 1358 aa17.61■□□□□ 0.41
LINC00963-212ENST00000608669 NBPF8Q3BBV2 869 aa17.6■□□□□ 0.41
LINC00963-212ENST00000608669 SCAF1Q9H7N4 1312 aaKnown RBP17.6■□□□□ 0.41
LINC00963-212ENST00000608669 YTHDC2Q9H6S0 1430 aaKnown RBP17.6■□□□□ 0.41
LINC00963-212ENST00000608669 SAFB2Q14151 953 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC00963-212ENST00000608669 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.58■□□□□ 0.41
LINC00963-212ENST00000608669 UBAP1LF5GYI3 381 aa17.58■□□□□ 0.4
LINC00963-212ENST00000608669 WAPLQ7Z5K2 1190 aa17.58■□□□□ 0.4
LINC00963-212ENST00000608669 LRPPRCP42704 1394 aaKnown RBP17.57■□□□□ 0.4
LINC00963-212ENST00000608669 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
LINC00963-212ENST00000608669 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
LINC00963-212ENST00000608669 ARHGEF28Q8N1W1 1705 aaKnown RBP17.57■□□□□ 0.4
LINC00963-212ENST00000608669 KIAA1210Q9ULL0 1709 aa17.56■□□□□ 0.4
LINC00963-212ENST00000608669 PTCH1Q13635 1447 aa17.55■□□□□ 0.4
LINC00963-212ENST00000608669 IQSEC2Q5JU85 1478 aa17.54■□□□□ 0.4
LINC00963-212ENST00000608669 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
LINC00963-212ENST00000608669 MSH6P52701 1360 aa17.53■□□□□ 0.4
LINC00963-212ENST00000608669 PRAM1Q96QH2 718 aa17.52■□□□□ 0.4
LINC00963-212ENST00000608669 TECPR2O15040 1411 aa17.52■□□□□ 0.4
LINC00963-212ENST00000608669 ADGRL3Q9HAR2 1447 aa17.51■□□□□ 0.39
LINC00963-212ENST00000608669 ROCK2O75116 1388 aaKnown RBP17.51■□□□□ 0.39
LINC00963-212ENST00000608669 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
LINC00963-212ENST00000608669 ABCC11Q96J66 1382 aa17.5■□□□□ 0.39
LINC00963-212ENST00000608669 ROBO1Q9Y6N7 1651 aa17.49■□□□□ 0.39
LINC00963-212ENST00000608669 FBXO41Q8TF61 875 aa17.49■□□□□ 0.39
LINC00963-212ENST00000608669 HIRIP3Q9BW71 556 aaPredicted RBP17.49■□□□□ 0.39
LINC00963-212ENST00000608669 RALGAPBQ86X10 1494 aa17.48■□□□□ 0.39
LINC00963-212ENST00000608669 QRICH2Q9H0J4 1663 aa17.48■□□□□ 0.39
LINC00963-212ENST00000608669 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms