RNA–Protein interactions for RNA: ENST00000608340.5

RNF146-209, Transcript of ring finger protein 146, human

TSL 4

Gene RNF146, Length 512 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF146-209	ENST00000608340	RAB3GAP2	Q9H2M9	1393 aa		29.26	■■■□□ 2.28
RNF146-209	ENST00000608340	FOXD1	Q16676	465 aa		29.26	■■■□□ 2.27
RNF146-209	ENST00000608340	SENP3	Q9H4L4	574 aa	Predicted RBP	29.24	■■■□□ 2.27
RNF146-209	ENST00000608340	MPHOSPH9	Q99550	1183 aa		29.23	■■■□□ 2.27
RNF146-209	ENST00000608340	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.22	■■■□□ 2.27
RNF146-209	ENST00000608340	CPS1	P31327	1500 aa		29.19	■■■□□ 2.26
RNF146-209	ENST00000608340	SLC26A8	Q96RN1	970 aa		29.18	■■■□□ 2.26
RNF146-209	ENST00000608340	IQSEC2	Q5JU85	1478 aa		29.17	■■■□□ 2.26
RNF146-209	ENST00000608340	PLEKHG1	Q9ULL1	1385 aa		29.15	■■■□□ 2.26
RNF146-209	ENST00000608340	PPP1R15A	O75807	674 aa	Predicted RBP	29.14	■■■□□ 2.26
RNF146-209	ENST00000608340	HDGF	P51858	240 aa	Known RBP	29.13	■■■□□ 2.25
RNF146-209	ENST00000608340	XIRP1	Q702N8	1843 aa	Known RBP	29.13	■■■□□ 2.25
RNF146-209	ENST00000608340	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.12	■■■□□ 2.25
RNF146-209	ENST00000608340	BCAN	Q96GW7	911 aa		29.12	■■■□□ 2.25
RNF146-209	ENST00000608340	NEXMIF	Q5QGS0	1516 aa		29.11	■■■□□ 2.25
RNF146-209	ENST00000608340	ZNF326	Q5BKZ1	582 aa	Known RBP	29.11	■■■□□ 2.25
RNF146-209	ENST00000608340	CHD2	O14647	1828 aa	Known RBP	29.1	■■■□□ 2.25
RNF146-209	ENST00000608340	LRRC7	Q96NW7	1537 aa		29.1	■■■□□ 2.25
RNF146-209	ENST00000608340	ACIN1	Q9UKV3	1341 aa	Known RBP	29.09	■■■□□ 2.25
RNF146-209	ENST00000608340	NRXN3	Q9Y4C0	1643 aa		29.08	■■■□□ 2.25
RNF146-209	ENST00000608340	ADAMTS13	Q76LX8	1427 aa		29.07	■■■□□ 2.24
RNF146-209	ENST00000608340	PPL	O60437	1756 aa		29.06	■■■□□ 2.24
RNF146-209	ENST00000608340	NWD1	Q149M9	1564 aa		29.03	■■■□□ 2.24
RNF146-209	ENST00000608340	CCDC144A	A2RUR9	1427 aa		29.03	■■■□□ 2.24
RNF146-209	ENST00000608340	KCNA6	P17658	529 aa		29.02	■■■□□ 2.24
RNF146-209	ENST00000608340	HRC	P23327	699 aa		29.02	■■■□□ 2.24
RNF146-209	ENST00000608340	UBAP1L	F5GYI3	381 aa		29	■■■□□ 2.23
RNF146-209	ENST00000608340	TBX22	Q9Y458	520 aa		29	■■■□□ 2.23
RNF146-209	ENST00000608340	DIP2A	Q14689	1571 aa		29	■■■□□ 2.23
RNF146-209	ENST00000608340	SETBP1	Q9Y6X0	1596 aa		29	■■■□□ 2.23
RNF146-209	ENST00000608340	ALK	Q9UM73	1620 aa		28.98	■■■□□ 2.23
RNF146-209	ENST00000608340	IFT172	Q9UG01	1749 aa		28.98	■■■□□ 2.23
RNF146-209	ENST00000608340	SPATA31E1	Q6ZUB1	1445 aa		28.97	■■■□□ 2.23
RNF146-209	ENST00000608340	RBM33	Q96EV2	1170 aa	Known RBP	28.95	■■■□□ 2.22
RNF146-209	ENST00000608340	RGL3	Q3MIN7	710 aa		28.93	■■■□□ 2.22
RNF146-209	ENST00000608340	SETD1A	O15047	1707 aa	Known RBP	28.93	■■■□□ 2.22
RNF146-209	ENST00000608340	NKTR	P30414	1462 aa	Known RBP	28.92	■■■□□ 2.22
RNF146-209	ENST00000608340	PTPRU	Q92729	1446 aa		28.92	■■■□□ 2.22
RNF146-209	ENST00000608340	RPGRIP1L	Q68CZ1	1315 aa		28.92	■■■□□ 2.22
RNF146-209	ENST00000608340	TMEM94	Q12767	1356 aa		28.91	■■■□□ 2.22
RNF146-209	ENST00000608340	ANKRD30B	Q9BXX2	1392 aa		28.91	■■■□□ 2.22
RNF146-209	ENST00000608340	PROSER2	Q86WR7	435 aa	Predicted RBP	28.91	■■■□□ 2.22
RNF146-209	ENST00000608340	MET	P08581	1390 aa		28.88	■■■□□ 2.21
RNF146-209	ENST00000608340	PIK3R4	Q99570	1358 aa		28.88	■■■□□ 2.21
RNF146-209	ENST00000608340	XRN1	Q8IZH2	1706 aa	Known RBP	28.87	■■■□□ 2.21
RNF146-209	ENST00000608340	VGF	O15240	615 aa	Predicted RBP	28.87	■■■□□ 2.21
RNF146-209	ENST00000608340	TOM1	O60784	492 aa		28.86	■■■□□ 2.21
RNF146-209	ENST00000608340	PIP4K2B	P78356	416 aa		28.84	■■■□□ 2.21
RNF146-209	ENST00000608340	AMOTL2	Q9Y2J4	779 aa		28.84	■■■□□ 2.21
RNF146-209	ENST00000608340	ADGRF5	Q8IZF2	1346 aa		28.84	■■■□□ 2.21
RNF146-209	ENST00000608340	SCAF1	Q9H7N4	1312 aa	Known RBP	28.81	■■■□□ 2.2
RNF146-209	ENST00000608340	TRIM26	Q12899	539 aa	Predicted RBP	28.75	■■■□□ 2.19
RNF146-209	ENST00000608340	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	28.74	■■■□□ 2.19
RNF146-209	ENST00000608340	PIK3C2G	O75747	1445 aa		28.71	■■■□□ 2.19
RNF146-209	ENST00000608340	MSH6	P52701	1360 aa		28.71	■■■□□ 2.19
RNF146-209	ENST00000608340	NCOA3	Q9Y6Q9	1424 aa		28.69	■■■□□ 2.18
RNF146-209	ENST00000608340	ASXL1	Q8IXJ9	1541 aa		28.69	■■■□□ 2.18
RNF146-209	ENST00000608340	MYOM2	P54296	1465 aa		28.69	■■■□□ 2.18
RNF146-209	ENST00000608340	NRXN1	Q9ULB1	1477 aa		28.69	■■■□□ 2.18
RNF146-209	ENST00000608340	HSPA1L	P34931	641 aa		28.68	■■■□□ 2.18
RNF146-209	ENST00000608340	NALCN	Q8IZF0	1738 aa		28.67	■■■□□ 2.18
RNF146-209	ENST00000608340	C14orf37	Q86TY3	774 aa		28.67	■■■□□ 2.18
RNF146-209	ENST00000608340	ROBO1	Q9Y6N7	1651 aa		28.66	■■■□□ 2.18
RNF146-209	ENST00000608340	DHX57	Q6P158	1386 aa	Known RBP	28.63	■■■□□ 2.17
RNF146-209	ENST00000608340	ROBO2	Q9HCK4	1378 aa		28.63	■■■□□ 2.17
RNF146-209	ENST00000608340	TMEM132E	Q6IEE7	984 aa		28.63	■■■□□ 2.17
RNF146-209	ENST00000608340	C19orf44	Q9H6X5	657 aa		28.62	■■■□□ 2.17
RNF146-209	ENST00000608340	DCAF11	Q8TEB1	546 aa		28.61	■■■□□ 2.17
RNF146-209	ENST00000608340	KDM2A	Q9Y2K7	1162 aa		28.61	■■■□□ 2.17
RNF146-209	ENST00000608340	LAMC1	P11047	1609 aa		28.61	■■■□□ 2.17
RNF146-209	ENST00000608340	PTCH1	Q13635	1447 aa		28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	PRAG1	Q86YV5	1406 aa		28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	CFAP70	Q5T0N1	1121 aa		28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	C14orf93	Q9H972	538 aa	Known RBP	28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	KNDC1	Q76NI1	1749 aa		28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	FAM135B	Q49AJ0	1406 aa		28.6	■■■□□ 2.17
RNF146-209	ENST00000608340	SLAIN2	Q9P270	581 aa		28.59	■■■□□ 2.17
RNF146-209	ENST00000608340	STK26	Q9P289	416 aa		28.58	■■■□□ 2.17
RNF146-209	ENST00000608340	ADGRL3	Q9HAR2	1447 aa		28.56	■■■□□ 2.16
RNF146-209	ENST00000608340	LRPPRC	P42704	1394 aa	Known RBP	28.55	■■■□□ 2.16
RNF146-209	ENST00000608340	ATF3	P18847	181 aa		28.54	■■■□□ 2.16
RNF146-209	ENST00000608340	SIN3A	Q96ST3	1273 aa		28.54	■■■□□ 2.16
RNF146-209	ENST00000608340	YTHDC2	Q9H6S0	1430 aa	Known RBP	28.53	■■■□□ 2.16
RNF146-209	ENST00000608340	CADPS2	Q86UW7	1296 aa		28.53	■■■□□ 2.16
RNF146-209	ENST00000608340	TECPR2	O15040	1411 aa		28.52	■■■□□ 2.16
RNF146-209	ENST00000608340	DCC	P43146	1447 aa		28.52	■■■□□ 2.16
RNF146-209	ENST00000608340	ABCC11	Q96J66	1382 aa		28.5	■■■□□ 2.15
RNF146-209	ENST00000608340	ADGRB1	O14514	1584 aa		28.5	■■■□□ 2.15
RNF146-209	ENST00000608340	WAPL	Q7Z5K2	1190 aa		28.49	■■■□□ 2.15
RNF146-209	ENST00000608340	MST1R	Q04912	1400 aa		28.49	■■■□□ 2.15
RNF146-209	ENST00000608340	PHLPP1	O60346	1717 aa		28.49	■■■□□ 2.15
RNF146-209	ENST00000608340	PLEKHH1	Q9ULM0	1364 aa		28.49	■■■□□ 2.15
RNF146-209	ENST00000608340	STAC3	Q96MF2	364 aa		28.46	■■■□□ 2.15
RNF146-209	ENST00000608340	NEUROD1	Q13562	356 aa		28.43	■■■□□ 2.14
RNF146-209	ENST00000608340	KIAA1210	Q9ULL0	1709 aa		28.41	■■■□□ 2.14
RNF146-209	ENST00000608340	BRINP3	Q76B58	766 aa		28.41	■■■□□ 2.14
RNF146-209	ENST00000608340	L3MBTL2	Q969R5	705 aa		28.4	■■■□□ 2.14
RNF146-209	ENST00000608340	CDC42BPG	Q6DT37	1551 aa		28.4	■■■□□ 2.14
RNF146-209	ENST00000608340	COL16A1	Q07092	1604 aa	Predicted RBP	28.4	■■■□□ 2.14
RNF146-209	ENST00000608340	SIRT1	Q96EB6	747 aa		28.38	■■■□□ 2.13

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms