RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 SLC20A2Q08357 652 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 RNF217Q8TC41 542 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 TRIM34Q9BYJ4 488 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 GOLGA6L3A6NEY3 463 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 POLD1P28340 1107 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 HSP90AB4PQ58FF6 505 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 CCDC18Q5T9S5 1454 aa8.67□□□□□ -1.02
SNX5-218ENST00000606570 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 TERF2IPQ9NYB0 399 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 SLC4A3P48751 1232 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 SATB1Q01826 763 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 EXOC6Q8TAG9 804 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 CNTLNQ9NXG0 1405 aa8.66□□□□□ -1.02
SNX5-218ENST00000606570 TNNT3P45378 269 aaPredicted RBP8.65□□□□□ -1.02
SNX5-218ENST00000606570 PIK3R5Q8WYR1 880 aa8.65□□□□□ -1.02
SNX5-218ENST00000606570 TOP2BQ02880 1626 aa8.65□□□□□ -1.02
SNX5-218ENST00000606570 CUX1P39880 1505 aa8.65□□□□□ -1.03
SNX5-218ENST00000606570 ESPNB1AK53 854 aa8.65□□□□□ -1.03
SNX5-218ENST00000606570 MLECQ14165 292 aa8.65□□□□□ -1.03
SNX5-218ENST00000606570 FHOD3Q2V2M9 1422 aa8.64□□□□□ -1.03
SNX5-218ENST00000606570 CCDC7Q96M83 1385 aa8.64□□□□□ -1.03
SNX5-218ENST00000606570 OTUD6BQ8N6M0 293 aa8.64□□□□□ -1.03
SNX5-218ENST00000606570 SGSM3Q96HU1 749 aa8.64□□□□□ -1.03
SNX5-218ENST00000606570 BIVM-ERCC5R4GMW8 1640 aa8.64□□□□□ -1.03
SNX5-218ENST00000606570 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNX5-218ENST00000606570 RINLQ6ZS11 566 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 RCAN3Q9UKA8 241 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 FMN1Q68DA7 1419 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 MPHOSPH9Q99550 1183 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 CEP83Q9Y592 693 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 UACAQ9BZF9 1416 aa8.63□□□□□ -1.03
SNX5-218ENST00000606570 ZNF771Q7L3S4 317 aaPredicted RBP8.62□□□□□ -1.03
SNX5-218ENST00000606570 RIPK4P57078 832 aa8.62□□□□□ -1.03
SNX5-218ENST00000606570 SPRYD3Q8NCJ5 442 aa8.62□□□□□ -1.03
SNX5-218ENST00000606570 CCDC94Q9BW85 323 aaPredicted RBP8.62□□□□□ -1.03
SNX5-218ENST00000606570 MRVI1Q9Y6F6 885 aa8.62□□□□□ -1.03
SNX5-218ENST00000606570 TIAM1Q13009 1591 aa8.62□□□□□ -1.03
SNX5-218ENST00000606570 CFTRP13569 1480 aa8.62□□□□□ -1.03
SNX5-218ENST00000606570 CT47B1P0C2W7 299 aaPredicted RBP8.61□□□□□ -1.03
SNX5-218ENST00000606570 TNNT1P13805 278 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 KIF7Q2M1P5 1343 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 NBPF6Q5VWK0 638 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 NBPF5PQ86XG9 351 aaPredicted RBP8.61□□□□□ -1.03
SNX5-218ENST00000606570 KCTD17Q8N5Z5 321 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 CALR3Q96L12 384 aaKnown RBP8.61□□□□□ -1.03
SNX5-218ENST00000606570 NBPF4Q96M43 638 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 MTMR7Q9Y216 660 aa8.61□□□□□ -1.03
SNX5-218ENST00000606570 RRP1P56182 461 aaKnown RBP8.6□□□□□ -1.03
SNX5-218ENST00000606570 MYCBPQ99417 103 aaPredicted RBP8.6□□□□□ -1.03
SNX5-218ENST00000606570 IGF1RP08069 1367 aa8.6□□□□□ -1.03
SNX5-218ENST00000606570 MPHOSPH10O00566 681 aaKnown RBP8.6□□□□□ -1.03
SNX5-218ENST00000606570 CBX1P83916 185 aa8.6□□□□□ -1.03
SNX5-218ENST00000606570 CT47A1Q5JQC4 288 aaPredicted RBP8.6□□□□□ -1.03
SNX5-218ENST00000606570 NESP48681 1621 aa8.6□□□□□ -1.03
SNX5-218ENST00000606570 FGD6Q6ZV73 1430 aa8.59□□□□□ -1.03
SNX5-218ENST00000606570 PLIN1O60240 522 aa8.59□□□□□ -1.03
SNX5-218ENST00000606570 FRAT2O75474 233 aaPredicted RBP8.59□□□□□ -1.03
SNX5-218ENST00000606570 RAI14Q9P0K7 980 aa8.59□□□□□ -1.03
SNX5-218ENST00000606570 CCDC96Q2M329 555 aa8.59□□□□□ -1.04
SNX5-218ENST00000606570 EXOC8Q8IYI6 725 aa8.59□□□□□ -1.04
SNX5-218ENST00000606570 SMG6Q86US8 1419 aaKnown RBP8.58□□□□□ -1.04
SNX5-218ENST00000606570 BRPF1P55201 1214 aaPredicted RBP8.58□□□□□ -1.04
SNX5-218ENST00000606570 BACH2Q9BYV9 841 aa8.58□□□□□ -1.04
SNX5-218ENST00000606570 CCDC172P0C7W6 258 aa8.58□□□□□ -1.04
SNX5-218ENST00000606570 ERCC6Q03468 1493 aa8.58□□□□□ -1.04
SNX5-218ENST00000606570 SKAP1Q86WV1 359 aa8.57□□□□□ -1.04
SNX5-218ENST00000606570 ZNF777Q9ULD5 760 aaPredicted RBP8.57□□□□□ -1.04
SNX5-218ENST00000606570 GTF2A1P52655 376 aaPredicted RBP8.57□□□□□ -1.04
SNX5-218ENST00000606570 NBPF8Q3BBV2 869 aa8.57□□□□□ -1.04
SNX5-218ENST00000606570 NBPF10Q6P3W6 841 aaKnown RBP8.57□□□□□ -1.04
SNX5-218ENST00000606570 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.57□□□□□ -1.04
SNX5-218ENST00000606570 IFNLR1Q8IU57 520 aaPredicted RBP8.57□□□□□ -1.04
SNX5-218ENST00000606570 CARD11Q9BXL7 1154 aa8.57□□□□□ -1.04
SNX5-218ENST00000606570 TSPYL1Q9H0U9 437 aa8.57□□□□□ -1.04
SNX5-218ENST00000606570 MS4A1P11836 297 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 TDO2P48775 406 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 CCDC66A2RUB6 948 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 TSHZ1Q6ZSZ6 1077 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 C1orf115Q9H7X2 142 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 SMC4Q9NTJ3 1288 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 R3HCC1Q9Y3T6 440 aaKnown RBP8.56□□□□□ -1.04
SNX5-218ENST00000606570 IPO8O15397 1037 aaKnown RBP8.56□□□□□ -1.04
SNX5-218ENST00000606570 TIGD1Q96MW7 591 aa8.56□□□□□ -1.04
SNX5-218ENST00000606570 HFM1A2PYH4 1435 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 MYH16Q9H6N6 1097 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 EFCC1Q9HA90 598 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 RBM28Q9NW13 759 aaKnown RBP8.55□□□□□ -1.04
SNX5-218ENST00000606570 UQCRHLA0A096LP55 91 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 UQCRHP07919 91 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 CCDC97Q96F63 343 aaPredicted RBP8.55□□□□□ -1.04
SNX5-218ENST00000606570 POGKQ9P215 609 aa8.55□□□□□ -1.04
SNX5-218ENST00000606570 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
SNX5-218ENST00000606570 TERF1P54274 439 aa8.54□□□□□ -1.04
SNX5-218ENST00000606570 SPTY2D1Q68D10 685 aaPredicted RBP8.54□□□□□ -1.04
SNX5-218ENST00000606570 CRBNQ96SW2 442 aa8.54□□□□□ -1.04
SNX5-218ENST00000606570 XRCC6P12956 609 aaKnown RBP eCLIP8.53□□□□□ -1.04
SNX5-218ENST00000606570 CAPN2P17655 700 aa8.53□□□□□ -1.04
SNX5-218ENST00000606570 DNAJC14Q6Y2X3 702 aaPredicted RBP8.53□□□□□ -1.04
SNX5-218ENST00000606570 PIAS4Q8N2W9 510 aaPredicted RBP8.53□□□□□ -1.04
SNX5-218ENST00000606570 PNISRQ8TF01 805 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms