RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 TOM1O60784 492 aa28.8■■■□□ 2.2
SRSF4-206ENST00000605204 TXNDC2Q86VQ3 553 aa28.75■■■□□ 2.19
SRSF4-206ENST00000605204 LTKP29376 864 aa28.75■■■□□ 2.19
SRSF4-206ENST00000605204 TRIM52Q96A61 297 aa28.75■■■□□ 2.19
SRSF4-206ENST00000605204 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
SRSF4-206ENST00000605204 TMEM131LA2VDJ0 1609 aa28.69■■■□□ 2.18
SRSF4-206ENST00000605204 SPHKAPQ2M3C7 1700 aa28.68■■■□□ 2.18
SRSF4-206ENST00000605204 SLC4A1APQ9BWU0 796 aaKnown RBP28.68■■■□□ 2.18
SRSF4-206ENST00000605204 SETD5Q9C0A6 1442 aa28.67■■■□□ 2.18
SRSF4-206ENST00000605204 TRPM2O94759 1503 aa28.67■■■□□ 2.18
SRSF4-206ENST00000605204 SENP3Q9H4L4 574 aaPredicted RBP28.65■■■□□ 2.18
SRSF4-206ENST00000605204 ZFYVE9O95405 1425 aa28.65■■■□□ 2.18
SRSF4-206ENST00000605204 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.64■■■□□ 2.18
SRSF4-206ENST00000605204 MYO5BQ9ULV0 1848 aa28.63■■■□□ 2.17
SRSF4-206ENST00000605204 RIMS2Q9UQ26 1411 aa28.62■■■□□ 2.17
SRSF4-206ENST00000605204 CHGAP10645 457 aaKnown RBP28.62■■■□□ 2.17
SRSF4-206ENST00000605204 NWD1Q149M9 1564 aa28.61■■■□□ 2.17
SRSF4-206ENST00000605204 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
SRSF4-206ENST00000605204 PLEKHG1Q9ULL1 1385 aa28.58■■■□□ 2.17
SRSF4-206ENST00000605204 RAB3GAP2Q9H2M9 1393 aa28.55■■■□□ 2.16
SRSF4-206ENST00000605204 MPHOSPH9Q99550 1183 aa28.54■■■□□ 2.16
SRSF4-206ENST00000605204 CLTCL1P53675 1640 aa28.53■■■□□ 2.16
SRSF4-206ENST00000605204 HRCP23327 699 aa28.52■■■□□ 2.16
SRSF4-206ENST00000605204 TMEM94Q12767 1356 aa28.52■■■□□ 2.16
SRSF4-206ENST00000605204 ROBO1Q9Y6N7 1651 aa28.52■■■□□ 2.16
SRSF4-206ENST00000605204 NKTRP30414 1462 aaKnown RBP28.5■■■□□ 2.15
SRSF4-206ENST00000605204 BCANQ96GW7 911 aa28.49■■■□□ 2.15
SRSF4-206ENST00000605204 PHF23Q9BUL5 403 aaPredicted RBP28.48■■■□□ 2.15
SRSF4-206ENST00000605204 DIP2AQ14689 1571 aa28.46■■■□□ 2.15
SRSF4-206ENST00000605204 ZNF326Q5BKZ1 582 aaKnown RBP28.46■■■□□ 2.15
SRSF4-206ENST00000605204 SLC26A8Q96RN1 970 aa28.46■■■□□ 2.15
SRSF4-206ENST00000605204 CCDC144AA2RUR9 1427 aa28.46■■■□□ 2.15
SRSF4-206ENST00000605204 KCNA6P17658 529 aa28.44■■■□□ 2.14
SRSF4-206ENST00000605204 TBX22Q9Y458 520 aa28.44■■■□□ 2.14
SRSF4-206ENST00000605204 RBM33Q96EV2 1170 aaKnown RBP28.43■■■□□ 2.14
SRSF4-206ENST00000605204 FAM135BQ49AJ0 1406 aa28.42■■■□□ 2.14
SRSF4-206ENST00000605204 CHD2O14647 1828 aaKnown RBP28.42■■■□□ 2.14
SRSF4-206ENST00000605204 KIF1BO60333 1816 aa28.42■■■□□ 2.14
SRSF4-206ENST00000605204 RPGRIP1LQ68CZ1 1315 aa28.42■■■□□ 2.14
SRSF4-206ENST00000605204 PIK3R4Q99570 1358 aa28.42■■■□□ 2.14
SRSF4-206ENST00000605204 NEXMIFQ5QGS0 1516 aa28.4■■■□□ 2.14
SRSF4-206ENST00000605204 FOXD1Q16676 465 aa28.39■■■□□ 2.14
SRSF4-206ENST00000605204 ADAMTS13Q76LX8 1427 aa28.39■■■□□ 2.14
SRSF4-206ENST00000605204 SETBP1Q9Y6X0 1596 aa28.38■■■□□ 2.13
SRSF4-206ENST00000605204 VGFO15240 615 aaPredicted RBP28.36■■■□□ 2.13
SRSF4-206ENST00000605204 NUTM2DQ5VT03 806 aaPredicted RBP28.36■■■□□ 2.13
SRSF4-206ENST00000605204 RGS17Q9UGC6 210 aaPredicted RBP28.36■■■□□ 2.13
SRSF4-206ENST00000605204 PHLPP1O60346 1717 aa28.33■■■□□ 2.13
SRSF4-206ENST00000605204 PROSER2Q86WR7 435 aaPredicted RBP28.32■■■□□ 2.12
SRSF4-206ENST00000605204 SPATA31E1Q6ZUB1 1445 aa28.31■■■□□ 2.12
SRSF4-206ENST00000605204 COL16A1Q07092 1604 aaPredicted RBP28.29■■■□□ 2.12
SRSF4-206ENST00000605204 MSH6P52701 1360 aa28.28■■■□□ 2.12
SRSF4-206ENST00000605204 NRXN3Q9Y4C0 1643 aa28.27■■■□□ 2.12
SRSF4-206ENST00000605204 ANKRD30BQ9BXX2 1392 aa28.27■■■□□ 2.12
SRSF4-206ENST00000605204 NCOA3Q9Y6Q9 1424 aa28.27■■■□□ 2.12
SRSF4-206ENST00000605204 SETD1AO15047 1707 aaKnown RBP28.23■■■□□ 2.11
SRSF4-206ENST00000605204 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.22■■■□□ 2.11
SRSF4-206ENST00000605204 PPLO60437 1756 aa28.21■■■□□ 2.11
SRSF4-206ENST00000605204 XRN1Q8IZH2 1706 aaKnown RBP28.19■■■□□ 2.1
SRSF4-206ENST00000605204 RGL3Q3MIN7 710 aa28.18■■■□□ 2.1
SRSF4-206ENST00000605204 AMOTL2Q9Y2J4 779 aa28.18■■■□□ 2.1
SRSF4-206ENST00000605204 METP08581 1390 aa28.17■■■□□ 2.1
SRSF4-206ENST00000605204 POTEAQ6S8J7 498 aa28.16■■■□□ 2.1
SRSF4-206ENST00000605204 PTPRUQ92729 1446 aa28.16■■■□□ 2.1
SRSF4-206ENST00000605204 AHDC1Q5TGY3 1603 aaPredicted RBP28.16■■■□□ 2.1
SRSF4-206ENST00000605204 LRP6O75581 1613 aa28.15■■■□□ 2.1
SRSF4-206ENST00000605204 PRAG1Q86YV5 1406 aa28.13■■■□□ 2.09
SRSF4-206ENST00000605204 SLAIN2Q9P270 581 aa28.13■■■□□ 2.09
SRSF4-206ENST00000605204 MYOM2P54296 1465 aa28.13■■■□□ 2.09
SRSF4-206ENST00000605204 IFT172Q9UG01 1749 aa28.12■■■□□ 2.09
SRSF4-206ENST00000605204 JCADQ9P266 1359 aa28.11■■■□□ 2.09
SRSF4-206ENST00000605204 SHPRHQ149N8 1683 aa28.11■■■□□ 2.09
SRSF4-206ENST00000605204 PIK3C2GO75747 1445 aa28.1■■■□□ 2.09
SRSF4-206ENST00000605204 PTCH1Q13635 1447 aa28.1■■■□□ 2.09
SRSF4-206ENST00000605204 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
SRSF4-206ENST00000605204 C14orf37Q86TY3 774 aa28.1■■■□□ 2.09
SRSF4-206ENST00000605204 STAC3Q96MF2 364 aa28.1■■■□□ 2.09
SRSF4-206ENST00000605204 TRIM26Q12899 539 aaPredicted RBP28.08■■■□□ 2.09
SRSF4-206ENST00000605204 C19orf44Q9H6X5 657 aa28.08■■■□□ 2.09
SRSF4-206ENST00000605204 DCCP43146 1447 aa28.08■■■□□ 2.09
SRSF4-206ENST00000605204 NRXN1Q9ULB1 1477 aa28.07■■■□□ 2.08
SRSF4-206ENST00000605204 CADPS2Q86UW7 1296 aa28.06■■■□□ 2.08
SRSF4-206ENST00000605204 NALCNQ8IZF0 1738 aa28.03■■■□□ 2.08
SRSF4-206ENST00000605204 NHSL1Q5SYE7 1610 aa28.02■■■□□ 2.08
SRSF4-206ENST00000605204 ASXL1Q8IXJ9 1541 aa28.02■■■□□ 2.08
SRSF4-206ENST00000605204 ATF3P18847 181 aa28.01■■■□□ 2.07
SRSF4-206ENST00000605204 LAMC1P11047 1609 aa28.01■■■□□ 2.07
SRSF4-206ENST00000605204 ADGRL3Q9HAR2 1447 aa27.99■■■□□ 2.07
SRSF4-206ENST00000605204 TECPR2O15040 1411 aa27.98■■■□□ 2.07
SRSF4-206ENST00000605204 LRPPRCP42704 1394 aaKnown RBP27.97■■■□□ 2.07
SRSF4-206ENST00000605204 MST1RQ04912 1400 aa27.97■■■□□ 2.07
SRSF4-206ENST00000605204 C14orf93Q9H972 538 aaKnown RBP27.97■■■□□ 2.07
SRSF4-206ENST00000605204 ROBO2Q9HCK4 1378 aa27.96■■■□□ 2.07
SRSF4-206ENST00000605204 ABCC11Q96J66 1382 aa27.95■■■□□ 2.07
SRSF4-206ENST00000605204 BRINP3Q76B58 766 aa27.93■■■□□ 2.06
SRSF4-206ENST00000605204 DCAF11Q8TEB1 546 aa27.92■■■□□ 2.06
SRSF4-206ENST00000605204 SPATA31A6Q5VVP1 1343 aa27.92■■■□□ 2.06
SRSF4-206ENST00000605204 DHX57Q6P158 1386 aaKnown RBP27.9■■■□□ 2.06
SRSF4-206ENST00000605204 YTHDC2Q9H6S0 1430 aaKnown RBP27.9■■■□□ 2.06
SRSF4-206ENST00000605204 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms