RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 BCANQ96GW7 911 aa23.73■■□□□ 1.39
CHCHD2P3-201ENST00000603038 SCAF1Q9H7N4 1312 aaKnown RBP23.73■■□□□ 1.39
CHCHD2P3-201ENST00000603038 RIMS2Q9UQ26 1411 aa23.73■■□□□ 1.39
CHCHD2P3-201ENST00000603038 ALKQ9UM73 1620 aa23.71■■□□□ 1.39
CHCHD2P3-201ENST00000603038 TRIM52Q96A61 297 aa23.7■■□□□ 1.38
CHCHD2P3-201ENST00000603038 KCNA6P17658 529 aa23.69■■□□□ 1.38
CHCHD2P3-201ENST00000603038 RBM33Q96EV2 1170 aaKnown RBP23.69■■□□□ 1.38
CHCHD2P3-201ENST00000603038 HFM1A2PYH4 1435 aa23.68■■□□□ 1.38
CHCHD2P3-201ENST00000603038 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
CHCHD2P3-201ENST00000603038 HSPA1LP34931 641 aa23.67■■□□□ 1.38
CHCHD2P3-201ENST00000603038 PLEKHG1Q9ULL1 1385 aa23.66■■□□□ 1.38
CHCHD2P3-201ENST00000603038 XIRP1Q702N8 1843 aaKnown RBP23.66■■□□□ 1.38
CHCHD2P3-201ENST00000603038 HDGFP51858 240 aaKnown RBP23.66■■□□□ 1.38
CHCHD2P3-201ENST00000603038 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
CHCHD2P3-201ENST00000603038 SPHKAPQ2M3C7 1700 aa23.63■■□□□ 1.37
CHCHD2P3-201ENST00000603038 PROSER2Q86WR7 435 aaPredicted RBP23.63■■□□□ 1.37
CHCHD2P3-201ENST00000603038 TBX22Q9Y458 520 aa23.61■■□□□ 1.37
CHCHD2P3-201ENST00000603038 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
CHCHD2P3-201ENST00000603038 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
CHCHD2P3-201ENST00000603038 SLC4A1APQ9BWU0 796 aaKnown RBP23.59■■□□□ 1.37
CHCHD2P3-201ENST00000603038 DISP3Q9P2K9 1392 aa23.58■■□□□ 1.37
CHCHD2P3-201ENST00000603038 FOXD1Q16676 465 aa23.58■■□□□ 1.37
CHCHD2P3-201ENST00000603038 ZNF326Q5BKZ1 582 aaKnown RBP23.57■■□□□ 1.36
CHCHD2P3-201ENST00000603038 CHD2O14647 1828 aaKnown RBP23.56■■□□□ 1.36
CHCHD2P3-201ENST00000603038 CLTCL1P53675 1640 aa23.56■■□□□ 1.36
CHCHD2P3-201ENST00000603038 NWD1Q149M9 1564 aa23.53■■□□□ 1.36
CHCHD2P3-201ENST00000603038 TRPM2O94759 1503 aa23.53■■□□□ 1.36
CHCHD2P3-201ENST00000603038 ILDR2Q71H61 639 aa23.52■■□□□ 1.36
CHCHD2P3-201ENST00000603038 NKTRP30414 1462 aaKnown RBP23.49■■□□□ 1.35
CHCHD2P3-201ENST00000603038 MPHOSPH9Q99550 1183 aa23.49■■□□□ 1.35
CHCHD2P3-201ENST00000603038 PTPRUQ92729 1446 aa23.49■■□□□ 1.35
CHCHD2P3-201ENST00000603038 AMOTL2Q9Y2J4 779 aa23.48■■□□□ 1.35
CHCHD2P3-201ENST00000603038 KIF1BO60333 1816 aa23.47■■□□□ 1.35
CHCHD2P3-201ENST00000603038 NRXN3Q9Y4C0 1643 aa23.46■■□□□ 1.35
CHCHD2P3-201ENST00000603038 NEXMIFQ5QGS0 1516 aa23.45■■□□□ 1.34
CHCHD2P3-201ENST00000603038 METP08581 1390 aa23.43■■□□□ 1.34
CHCHD2P3-201ENST00000603038 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
CHCHD2P3-201ENST00000603038 DIP2AQ14689 1571 aa23.43■■□□□ 1.34
CHCHD2P3-201ENST00000603038 FAM135BQ49AJ0 1406 aa23.42■■□□□ 1.34
CHCHD2P3-201ENST00000603038 SETD5Q9C0A6 1442 aa23.42■■□□□ 1.34
CHCHD2P3-201ENST00000603038 MSH6P52701 1360 aa23.42■■□□□ 1.34
CHCHD2P3-201ENST00000603038 SETBP1Q9Y6X0 1596 aa23.41■■□□□ 1.34
CHCHD2P3-201ENST00000603038 SLAIN2Q9P270 581 aa23.41■■□□□ 1.34
CHCHD2P3-201ENST00000603038 C14orf37Q86TY3 774 aa23.39■■□□□ 1.33
CHCHD2P3-201ENST00000603038 VGFO15240 615 aaPredicted RBP23.37■■□□□ 1.33
CHCHD2P3-201ENST00000603038 RGL3Q3MIN7 710 aa23.37■■□□□ 1.33
CHCHD2P3-201ENST00000603038 RAB3GAP2Q9H2M9 1393 aa23.36■■□□□ 1.33
CHCHD2P3-201ENST00000603038 RPGRIP1LQ68CZ1 1315 aa23.35■■□□□ 1.33
CHCHD2P3-201ENST00000603038 ROBO1Q9Y6N7 1651 aa23.35■■□□□ 1.33
CHCHD2P3-201ENST00000603038 NCOA3Q9Y6Q9 1424 aa23.35■■□□□ 1.33
CHCHD2P3-201ENST00000603038 C19orf44Q9H6X5 657 aa23.35■■□□□ 1.33
CHCHD2P3-201ENST00000603038 MED1Q15648 1581 aaPredicted RBP23.34■■□□□ 1.33
CHCHD2P3-201ENST00000603038 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.33■■□□□ 1.32
CHCHD2P3-201ENST00000603038 XRN1Q8IZH2 1706 aaKnown RBP23.32■■□□□ 1.32
CHCHD2P3-201ENST00000603038 CCDC144AA2RUR9 1427 aa23.32■■□□□ 1.32
CHCHD2P3-201ENST00000603038 ADGRF5Q8IZF2 1346 aa23.32■■□□□ 1.32
CHCHD2P3-201ENST00000603038 PPLO60437 1756 aa23.31■■□□□ 1.32
CHCHD2P3-201ENST00000603038 ATF3P18847 181 aa23.3■■□□□ 1.32
CHCHD2P3-201ENST00000603038 SPATA31E1Q6ZUB1 1445 aa23.3■■□□□ 1.32
CHCHD2P3-201ENST00000603038 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
CHCHD2P3-201ENST00000603038 SETD1AO15047 1707 aaKnown RBP23.27■■□□□ 1.32
CHCHD2P3-201ENST00000603038 ACIN1Q9UKV3 1341 aaKnown RBP23.24■■□□□ 1.31
CHCHD2P3-201ENST00000603038 ROBO2Q9HCK4 1378 aa23.23■■□□□ 1.31
CHCHD2P3-201ENST00000603038 BRINP3Q76B58 766 aa23.21■■□□□ 1.31
CHCHD2P3-201ENST00000603038 PHLPP1O60346 1717 aa23.21■■□□□ 1.31
CHCHD2P3-201ENST00000603038 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
CHCHD2P3-201ENST00000603038 RGS17Q9UGC6 210 aaPredicted RBP23.2■■□□□ 1.3
CHCHD2P3-201ENST00000603038 SOCS7O14512 581 aa23.19■■□□□ 1.3
CHCHD2P3-201ENST00000603038 TMEM132EQ6IEE7 984 aa23.19■■□□□ 1.3
CHCHD2P3-201ENST00000603038 IFT172Q9UG01 1749 aa23.19■■□□□ 1.3
CHCHD2P3-201ENST00000603038 ANKRD30BQ9BXX2 1392 aa23.18■■□□□ 1.3
CHCHD2P3-201ENST00000603038 STK26Q9P289 416 aa23.18■■□□□ 1.3
CHCHD2P3-201ENST00000603038 MST1RQ04912 1400 aa23.17■■□□□ 1.3
CHCHD2P3-201ENST00000603038 ADGRL3Q9HAR2 1447 aa23.17■■□□□ 1.3
CHCHD2P3-201ENST00000603038 HRCP23327 699 aa23.17■■□□□ 1.3
CHCHD2P3-201ENST00000603038 DCCP43146 1447 aa23.16■■□□□ 1.3
CHCHD2P3-201ENST00000603038 NALCNQ8IZF0 1738 aa23.16■■□□□ 1.3
CHCHD2P3-201ENST00000603038 DDX17Q92841 729 aaKnown RBP23.15■■□□□ 1.3
CHCHD2P3-201ENST00000603038 COL16A1Q07092 1604 aaPredicted RBP23.15■■□□□ 1.3
CHCHD2P3-201ENST00000603038 WAPLQ7Z5K2 1190 aa23.14■■□□□ 1.29
CHCHD2P3-201ENST00000603038 PTCH1Q13635 1447 aa23.14■■□□□ 1.29
CHCHD2P3-201ENST00000603038 JCADQ9P266 1359 aa23.12■■□□□ 1.29
CHCHD2P3-201ENST00000603038 PIK3C2GO75747 1445 aa23.11■■□□□ 1.29
CHCHD2P3-201ENST00000603038 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
CHCHD2P3-201ENST00000603038 CFAP70Q5T0N1 1121 aa23.11■■□□□ 1.29
CHCHD2P3-201ENST00000603038 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
CHCHD2P3-201ENST00000603038 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
CHCHD2P3-201ENST00000603038 C14orf93Q9H972 538 aaKnown RBP23.1■■□□□ 1.29
CHCHD2P3-201ENST00000603038 ORAI2Q96SN7 254 aa23.09■■□□□ 1.29
CHCHD2P3-201ENST00000603038 LRPPRCP42704 1394 aaKnown RBP23.09■■□□□ 1.29
CHCHD2P3-201ENST00000603038 C1orf167Q5SNV9 1468 aa23.08■■□□□ 1.29
CHCHD2P3-201ENST00000603038 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
CHCHD2P3-201ENST00000603038 KDM2AQ9Y2K7 1162 aa23.07■■□□□ 1.28
CHCHD2P3-201ENST00000603038 ABCC11Q96J66 1382 aa23.06■■□□□ 1.28
CHCHD2P3-201ENST00000603038 POTEAQ6S8J7 498 aa23.06■■□□□ 1.28
CHCHD2P3-201ENST00000603038 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
CHCHD2P3-201ENST00000603038 TECPR2O15040 1411 aa23.03■■□□□ 1.28
CHCHD2P3-201ENST00000603038 YTHDC2Q9H6S0 1430 aaKnown RBP23.03■■□□□ 1.28
CHCHD2P3-201ENST00000603038 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
CHCHD2P3-201ENST00000603038 LRP6O75581 1613 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms