RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 STRCP1A6NGW2 1772 aa36.17■■■■□ 3.38
UBE2E3-213ENST00000602959 CHGAP10645 457 aaKnown RBP36.16■■■■□ 3.38
UBE2E3-213ENST00000602959 KIF1BO60333 1816 aa36.12■■■■□ 3.37
UBE2E3-213ENST00000602959 HDGFP51858 240 aaKnown RBP36.11■■■■□ 3.37
UBE2E3-213ENST00000602959 RAB3GAP2Q9H2M9 1393 aa36.11■■■■□ 3.37
UBE2E3-213ENST00000602959 PLEKHG1Q9ULL1 1385 aa36.11■■■■□ 3.37
UBE2E3-213ENST00000602959 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.09■■■■□ 3.37
UBE2E3-213ENST00000602959 MPHOSPH9Q99550 1183 aa36.07■■■■□ 3.36
UBE2E3-213ENST00000602959 PPP1R15AO75807 674 aaPredicted RBP36.05■■■■□ 3.36
UBE2E3-213ENST00000602959 LRRC7Q96NW7 1537 aa36■■■■□ 3.35
UBE2E3-213ENST00000602959 FOXD1Q16676 465 aa36■■■■□ 3.35
UBE2E3-213ENST00000602959 SLC26A8Q96RN1 970 aa36■■■■□ 3.35
UBE2E3-213ENST00000602959 NEXMIFQ5QGS0 1516 aa35.98■■■■□ 3.35
UBE2E3-213ENST00000602959 DIP2AQ14689 1571 aa35.98■■■■□ 3.35
UBE2E3-213ENST00000602959 NWD1Q149M9 1564 aa35.98■■■■□ 3.35
UBE2E3-213ENST00000602959 BCANQ96GW7 911 aa35.96■■■■□ 3.35
UBE2E3-213ENST00000602959 ZNF326Q5BKZ1 582 aaKnown RBP35.95■■■■□ 3.35
UBE2E3-213ENST00000602959 NUTM2DQ5VT03 806 aaPredicted RBP35.95■■■■□ 3.35
UBE2E3-213ENST00000602959 ADAMTS13Q76LX8 1427 aa35.94■■■■□ 3.34
UBE2E3-213ENST00000602959 HRCP23327 699 aa35.93■■■■□ 3.34
UBE2E3-213ENST00000602959 CCDC144AA2RUR9 1427 aa35.92■■■■□ 3.34
UBE2E3-213ENST00000602959 CHD2O14647 1828 aaKnown RBP35.92■■■■□ 3.34
UBE2E3-213ENST00000602959 SETBP1Q9Y6X0 1596 aa35.92■■■■□ 3.34
UBE2E3-213ENST00000602959 NRXN3Q9Y4C0 1643 aa35.91■■■■□ 3.34
UBE2E3-213ENST00000602959 KCNA6P17658 529 aa35.91■■■■□ 3.34
UBE2E3-213ENST00000602959 XIRP1Q702N8 1843 aaKnown RBP35.91■■■■□ 3.34
UBE2E3-213ENST00000602959 TBX22Q9Y458 520 aa35.9■■■■□ 3.34
UBE2E3-213ENST00000602959 NKTRP30414 1462 aaKnown RBP35.9■■■■□ 3.34
UBE2E3-213ENST00000602959 SENP3Q9H4L4 574 aaPredicted RBP35.88■■■■□ 3.33
UBE2E3-213ENST00000602959 UBAP1LF5GYI3 381 aa35.86■■■■□ 3.33
UBE2E3-213ENST00000602959 PPLO60437 1756 aa35.86■■■■□ 3.33
UBE2E3-213ENST00000602959 PIK3R4Q99570 1358 aa35.84■■■■□ 3.33
UBE2E3-213ENST00000602959 SPATA31E1Q6ZUB1 1445 aa35.83■■■■□ 3.33
UBE2E3-213ENST00000602959 RPGRIP1LQ68CZ1 1315 aa35.83■■■■□ 3.33
UBE2E3-213ENST00000602959 ALKQ9UM73 1620 aa35.8■■■■□ 3.32
UBE2E3-213ENST00000602959 IFT172Q9UG01 1749 aa35.77■■■■□ 3.32
UBE2E3-213ENST00000602959 TMEM94Q12767 1356 aa35.76■■■■□ 3.32
UBE2E3-213ENST00000602959 TOM1O60784 492 aa35.76■■■■□ 3.32
UBE2E3-213ENST00000602959 VGFO15240 615 aaPredicted RBP35.74■■■■□ 3.31
UBE2E3-213ENST00000602959 PROSER2Q86WR7 435 aaPredicted RBP35.72■■■■□ 3.31
UBE2E3-213ENST00000602959 SETD1AO15047 1707 aaKnown RBP35.71■■■■□ 3.31
UBE2E3-213ENST00000602959 XRN1Q8IZH2 1706 aaKnown RBP35.71■■■■□ 3.31
UBE2E3-213ENST00000602959 ANKRD30BQ9BXX2 1392 aa35.71■■■■□ 3.31
UBE2E3-213ENST00000602959 PTPRUQ92729 1446 aa35.7■■■■□ 3.31
UBE2E3-213ENST00000602959 METP08581 1390 aa35.65■■■■□ 3.3
UBE2E3-213ENST00000602959 RGL3Q3MIN7 710 aa35.64■■■■□ 3.3
UBE2E3-213ENST00000602959 NCOA3Q9Y6Q9 1424 aa35.63■■■■□ 3.29
UBE2E3-213ENST00000602959 AMOTL2Q9Y2J4 779 aa35.62■■■■□ 3.29
UBE2E3-213ENST00000602959 PIP4K2BP78356 416 aa35.61■■■■□ 3.29
UBE2E3-213ENST00000602959 RBM33Q96EV2 1170 aaKnown RBP35.61■■■■□ 3.29
UBE2E3-213ENST00000602959 SCAF1Q9H7N4 1312 aaKnown RBP35.58■■■■□ 3.29
UBE2E3-213ENST00000602959 MSH6P52701 1360 aa35.57■■■■□ 3.28
UBE2E3-213ENST00000602959 ADGRF5Q8IZF2 1346 aa35.57■■■■□ 3.28
UBE2E3-213ENST00000602959 MYOM2P54296 1465 aa35.54■■■■□ 3.28
UBE2E3-213ENST00000602959 PIK3C2GO75747 1445 aa35.53■■■■□ 3.28
UBE2E3-213ENST00000602959 PRAG1Q86YV5 1406 aa35.52■■■■□ 3.28
UBE2E3-213ENST00000602959 NRXN1Q9ULB1 1477 aa35.51■■■■□ 3.28
UBE2E3-213ENST00000602959 SIPA1L2Q9P2F8 1722 aaPredicted RBP35.5■■■■□ 3.27
UBE2E3-213ENST00000602959 PTCH1Q13635 1447 aa35.49■■■■□ 3.27
UBE2E3-213ENST00000602959 HSPA1LP34931 641 aa35.45■■■■□ 3.27
UBE2E3-213ENST00000602959 FAM135BQ49AJ0 1406 aa35.45■■■■□ 3.27
UBE2E3-213ENST00000602959 LAMC1P11047 1609 aa35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 ASXL1Q8IXJ9 1541 aa35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 TRIM26Q12899 539 aaPredicted RBP35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 C14orf37Q86TY3 774 aa35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 C19orf44Q9H6X5 657 aa35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 ROBO1Q9Y6N7 1651 aa35.43■■■■□ 3.26
UBE2E3-213ENST00000602959 DCCP43146 1447 aa35.41■■■■□ 3.26
UBE2E3-213ENST00000602959 NALCNQ8IZF0 1738 aa35.4■■■■□ 3.26
UBE2E3-213ENST00000602959 ADGRL3Q9HAR2 1447 aa35.39■■■■□ 3.26
UBE2E3-213ENST00000602959 ROBO2Q9HCK4 1378 aa35.38■■■■□ 3.26
UBE2E3-213ENST00000602959 KNDC1Q76NI1 1749 aa35.37■■■■□ 3.25
UBE2E3-213ENST00000602959 CADPS2Q86UW7 1296 aa35.36■■■■□ 3.25
UBE2E3-213ENST00000602959 SLAIN2Q9P270 581 aa35.36■■■■□ 3.25
UBE2E3-213ENST00000602959 TECPR2O15040 1411 aa35.35■■■■□ 3.25
UBE2E3-213ENST00000602959 C14orf93Q9H972 538 aaKnown RBP35.34■■■■□ 3.25
UBE2E3-213ENST00000602959 ATF3P18847 181 aa35.33■■■■□ 3.25
UBE2E3-213ENST00000602959 LRPPRCP42704 1394 aaKnown RBP35.33■■■■□ 3.25
UBE2E3-213ENST00000602959 STAC3Q96MF2 364 aa35.32■■■■□ 3.24
UBE2E3-213ENST00000602959 DHX57Q6P158 1386 aaKnown RBP35.32■■■■□ 3.24
UBE2E3-213ENST00000602959 DCAF11Q8TEB1 546 aa35.29■■■■□ 3.24
UBE2E3-213ENST00000602959 YTHDC2Q9H6S0 1430 aaKnown RBP35.29■■■■□ 3.24
UBE2E3-213ENST00000602959 ABCC11Q96J66 1382 aa35.28■■■■□ 3.24
UBE2E3-213ENST00000602959 CFAP70Q5T0N1 1121 aa35.27■■■■□ 3.24
UBE2E3-213ENST00000602959 TMEM132EQ6IEE7 984 aa35.27■■■■□ 3.24
UBE2E3-213ENST00000602959 MST1RQ04912 1400 aa35.24■■■■□ 3.23
UBE2E3-213ENST00000602959 ADGRB1O14514 1584 aa35.22■■■■□ 3.23
UBE2E3-213ENST00000602959 KDM2AQ9Y2K7 1162 aa35.22■■■■□ 3.23
UBE2E3-213ENST00000602959 STK26Q9P289 416 aa35.21■■■■□ 3.23
UBE2E3-213ENST00000602959 PHLPP1O60346 1717 aa35.2■■■■□ 3.23
UBE2E3-213ENST00000602959 CDC42BPGQ6DT37 1551 aa35.19■■■■□ 3.22
UBE2E3-213ENST00000602959 AHDC1Q5TGY3 1603 aaPredicted RBP35.17■■■■□ 3.22
UBE2E3-213ENST00000602959 SIRT1Q96EB6 747 aa35.15■■■■□ 3.22
UBE2E3-213ENST00000602959 DLC1Q96QB1 1528 aa35.15■■■■□ 3.22
UBE2E3-213ENST00000602959 COL16A1Q07092 1604 aaPredicted RBP35.14■■■■□ 3.22
UBE2E3-213ENST00000602959 BRINP3Q76B58 766 aa35.13■■■■□ 3.21
UBE2E3-213ENST00000602959 PLEKHH1Q9ULM0 1364 aa35.13■■■■□ 3.21
UBE2E3-213ENST00000602959 KIAA1210Q9ULL0 1709 aa35.12■■■■□ 3.21
UBE2E3-213ENST00000602959 WAPLQ7Z5K2 1190 aa35.12■■■■□ 3.21
UBE2E3-213ENST00000602959 MED1Q15648 1581 aaPredicted RBP35.12■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms