RNA–Protein interactions for RNA: ENST00000602800.1

PPFIA3-210, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 4

Gene PPFIA3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-210ENST00000602800 RPRD2Q5VT52 1461 aaKnown RBP29.71■■■□□ 2.35
PPFIA3-210ENST00000602800 HDGFP51858 240 aaKnown RBP29.7■■■□□ 2.35
PPFIA3-210ENST00000602800 NKTRP30414 1462 aaKnown RBP29.69■■■□□ 2.34
PPFIA3-210ENST00000602800 PPP1R15AO75807 674 aaPredicted RBP29.69■■■□□ 2.34
PPFIA3-210ENST00000602800 MSH6P52701 1360 aa29.68■■■□□ 2.34
PPFIA3-210ENST00000602800 PLEKHG1Q9ULL1 1385 aa29.64■■■□□ 2.34
PPFIA3-210ENST00000602800 NWD1Q149M9 1564 aa29.63■■■□□ 2.33
PPFIA3-210ENST00000602800 RIMS2Q9UQ26 1411 aa29.62■■■□□ 2.33
PPFIA3-210ENST00000602800 SLAIN2Q9P270 581 aa29.62■■■□□ 2.33
PPFIA3-210ENST00000602800 ZFYVE9O95405 1425 aa29.62■■■□□ 2.33
PPFIA3-210ENST00000602800 ROBO1Q9Y6N7 1651 aa29.61■■■□□ 2.33
PPFIA3-210ENST00000602800 CHGAP10645 457 aaKnown RBP29.6■■■□□ 2.33
PPFIA3-210ENST00000602800 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.59■■■□□ 2.33
PPFIA3-210ENST00000602800 TBX22Q9Y458 520 aa29.57■■■□□ 2.32
PPFIA3-210ENST00000602800 POTEAQ6S8J7 498 aa29.56■■■□□ 2.32
PPFIA3-210ENST00000602800 C14orf37Q86TY3 774 aa29.53■■■□□ 2.32
PPFIA3-210ENST00000602800 TMEM131LA2VDJ0 1609 aa29.51■■■□□ 2.31
PPFIA3-210ENST00000602800 NCOA3Q9Y6Q9 1424 aa29.51■■■□□ 2.31
PPFIA3-210ENST00000602800 JCADQ9P266 1359 aa29.51■■■□□ 2.31
PPFIA3-210ENST00000602800 NUTM2DQ5VT03 806 aaPredicted RBP29.5■■■□□ 2.31
PPFIA3-210ENST00000602800 GCC2Q8IWJ2 1684 aa29.48■■■□□ 2.31
PPFIA3-210ENST00000602800 ROCK1Q13464 1354 aa29.48■■■□□ 2.31
PPFIA3-210ENST00000602800 UNC13BO14795 1591 aa29.47■■■□□ 2.31
PPFIA3-210ENST00000602800 CHD2O14647 1828 aaKnown RBP29.45■■■□□ 2.31
PPFIA3-210ENST00000602800 CADPS2Q86UW7 1296 aa29.45■■■□□ 2.31
PPFIA3-210ENST00000602800 ADAMTS13Q76LX8 1427 aa29.45■■■□□ 2.3
PPFIA3-210ENST00000602800 PIK3R4Q99570 1358 aa29.44■■■□□ 2.3
PPFIA3-210ENST00000602800 MYO5BQ9ULV0 1848 aa29.44■■■□□ 2.3
PPFIA3-210ENST00000602800 C19orf44Q9H6X5 657 aa29.44■■■□□ 2.3
PPFIA3-210ENST00000602800 PHLPP1O60346 1717 aa29.43■■■□□ 2.3
PPFIA3-210ENST00000602800 ATF3P18847 181 aa29.43■■■□□ 2.3
PPFIA3-210ENST00000602800 NUP155O75694 1391 aa29.42■■■□□ 2.3
PPFIA3-210ENST00000602800 DIP2AQ14689 1571 aa29.39■■■□□ 2.3
PPFIA3-210ENST00000602800 E9PCH4 1651 aa29.39■■■□□ 2.3
PPFIA3-210ENST00000602800 ITGAEP38570 1179 aa29.38■■■□□ 2.29
PPFIA3-210ENST00000602800 AMOTL2Q9Y2J4 779 aa29.37■■■□□ 2.29
PPFIA3-210ENST00000602800 SPATA31A6Q5VVP1 1343 aa29.37■■■□□ 2.29
PPFIA3-210ENST00000602800 IQGAP3Q86VI3 1631 aa29.36■■■□□ 2.29
PPFIA3-210ENST00000602800 MEX3CQ5U5Q3 659 aaKnown RBP29.36■■■□□ 2.29
PPFIA3-210ENST00000602800 COL16A1Q07092 1604 aaPredicted RBP29.34■■■□□ 2.29
PPFIA3-210ENST00000602800 TRPM2O94759 1503 aa29.33■■■□□ 2.29
PPFIA3-210ENST00000602800 ZNF772Q68DY9 489 aaPredicted RBP29.3■■■□□ 2.28
PPFIA3-210ENST00000602800 PTPRUQ92729 1446 aa29.28■■■□□ 2.28
PPFIA3-210ENST00000602800 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.28■■■□□ 2.28
PPFIA3-210ENST00000602800 ZNF326Q5BKZ1 582 aaKnown RBP29.28■■■□□ 2.28
PPFIA3-210ENST00000602800 BRINP3Q76B58 766 aa29.27■■■□□ 2.28
PPFIA3-210ENST00000602800 LRP6O75581 1613 aa29.27■■■□□ 2.28
PPFIA3-210ENST00000602800 AHDC1Q5TGY3 1603 aaPredicted RBP29.27■■■□□ 2.28
PPFIA3-210ENST00000602800 DCCP43146 1447 aa29.24■■■□□ 2.27
PPFIA3-210ENST00000602800 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
PPFIA3-210ENST00000602800 NUTM2BA6NNL0 878 aaPredicted RBP29.19■■■□□ 2.26
PPFIA3-210ENST00000602800 NUTM2EB1AL46 878 aaPredicted RBP29.19■■■□□ 2.26
PPFIA3-210ENST00000602800 NUTM2AQ8IVF1 878 aaPredicted RBP29.19■■■□□ 2.26
PPFIA3-210ENST00000602800 SETBP1Q9Y6X0 1596 aa29.18■■■□□ 2.26
PPFIA3-210ENST00000602800 TRIM52Q96A61 297 aa29.18■■■□□ 2.26
PPFIA3-210ENST00000602800 METP08581 1390 aa29.17■■■□□ 2.26
PPFIA3-210ENST00000602800 SETD1AO15047 1707 aaKnown RBP29.17■■■□□ 2.26
PPFIA3-210ENST00000602800 SHPRHQ149N8 1683 aa29.16■■■□□ 2.26
PPFIA3-210ENST00000602800 MST1RQ04912 1400 aa29.14■■■□□ 2.26
PPFIA3-210ENST00000602800 RXRBP28702 533 aa29.14■■■□□ 2.26
PPFIA3-210ENST00000602800 ASXL1Q8IXJ9 1541 aa29.14■■■□□ 2.25
PPFIA3-210ENST00000602800 NRXN3Q9Y4C0 1643 aa29.13■■■□□ 2.25
PPFIA3-210ENST00000602800 LRRC59Q96AG4 307 aaKnown RBP29.13■■■□□ 2.25
PPFIA3-210ENST00000602800 XRN1Q8IZH2 1706 aaKnown RBP29.13■■■□□ 2.25
PPFIA3-210ENST00000602800 SETD5Q9C0A6 1442 aa29.12■■■□□ 2.25
PPFIA3-210ENST00000602800 SPHKAPQ2M3C7 1700 aa29.11■■■□□ 2.25
PPFIA3-210ENST00000602800 UPF1Q92900 1129 aaKnown RBP eCLIP29.1■■■□□ 2.25
PPFIA3-210ENST00000602800 ADGRL3Q9HAR2 1447 aa29.09■■■□□ 2.25
PPFIA3-210ENST00000602800 AFF2P51816 1311 aa29.07■■■□□ 2.24
PPFIA3-210ENST00000602800 DDX17Q92841 729 aaKnown RBP29.04■■■□□ 2.24
PPFIA3-210ENST00000602800 NEXMIFQ5QGS0 1516 aa29.04■■■□□ 2.24
PPFIA3-210ENST00000602800 VGFO15240 615 aaPredicted RBP29.02■■■□□ 2.24
PPFIA3-210ENST00000602800 CLTCL1P53675 1640 aa29.02■■■□□ 2.24
PPFIA3-210ENST00000602800 C8orf37Q96NL8 207 aa29.01■■■□□ 2.23
PPFIA3-210ENST00000602800 CDK12Q9NYV4 1490 aaPredicted RBP29.01■■■□□ 2.23
PPFIA3-210ENST00000602800 PNPLA6Q8IY17 1366 aa29■■■□□ 2.23
PPFIA3-210ENST00000602800 NHSL1Q5SYE7 1610 aa28.99■■■□□ 2.23
PPFIA3-210ENST00000602800 NAIPQ13075 1403 aa28.98■■■□□ 2.23
PPFIA3-210ENST00000602800 QTRT2Q9H974 415 aaKnown RBP28.97■■■□□ 2.23
PPFIA3-210ENST00000602800 C1orf167Q5SNV9 1468 aa28.97■■■□□ 2.23
PPFIA3-210ENST00000602800 RRBP1Q9P2E9 1410 aaKnown RBP28.96■■■□□ 2.23
PPFIA3-210ENST00000602800 PTCH1Q13635 1447 aa28.95■■■□□ 2.23
PPFIA3-210ENST00000602800 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
PPFIA3-210ENST00000602800 RBM6P78332 1123 aaKnown RBP28.94■■■□□ 2.22
PPFIA3-210ENST00000602800 NALCNQ8IZF0 1738 aa28.92■■■□□ 2.22
PPFIA3-210ENST00000602800 ROBO2Q9HCK4 1378 aa28.92■■■□□ 2.22
PPFIA3-210ENST00000602800 ADAMTS2O95450 1211 aa28.92■■■□□ 2.22
PPFIA3-210ENST00000602800 NGLY1Q96IV0 654 aa28.92■■■□□ 2.22
PPFIA3-210ENST00000602800 ORAI2Q96SN7 254 aa28.91■■■□□ 2.22
PPFIA3-210ENST00000602800 SLC4A1APQ9BWU0 796 aaKnown RBP28.91■■■□□ 2.22
PPFIA3-210ENST00000602800 KIF1BO60333 1816 aa28.9■■■□□ 2.22
PPFIA3-210ENST00000602800 SOS2Q07890 1332 aaPredicted RBP28.89■■■□□ 2.21
PPFIA3-210ENST00000602800 RGS12O14924 1447 aa28.86■■■□□ 2.21
PPFIA3-210ENST00000602800 HFM1A2PYH4 1435 aa28.86■■■□□ 2.21
PPFIA3-210ENST00000602800 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
PPFIA3-210ENST00000602800 USP21Q9UK80 565 aa28.81■■■□□ 2.2
PPFIA3-210ENST00000602800 LAMC1P11047 1609 aa28.79■■■□□ 2.2
PPFIA3-210ENST00000602800 NPHP3Q7Z494 1330 aa28.78■■■□□ 2.2
PPFIA3-210ENST00000602800 ESCO1Q5FWF5 840 aa28.78■■■□□ 2.2
PPFIA3-210ENST00000602800 TRPC5Q9UL62 973 aaPredicted RBP28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms