RNA–Protein interactions for RNA: ENST00000601668.5

PNPLA6-223, Transcript of patatin like phospholipase domain containing 6, human

TSL 3

Gene PNPLA6, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNPLA6-223	ENST00000601668	KIF1B	O60333	1816 aa		29.98	■■■□□ 2.39
PNPLA6-223	ENST00000601668	FOXD1	Q16676	465 aa		29.97	■■■□□ 2.39
PNPLA6-223	ENST00000601668	IQSEC2	Q5JU85	1478 aa		29.97	■■■□□ 2.39
PNPLA6-223	ENST00000601668	MPHOSPH9	Q99550	1183 aa		29.96	■■■□□ 2.39
PNPLA6-223	ENST00000601668	CPS1	P31327	1500 aa		29.96	■■■□□ 2.39
PNPLA6-223	ENST00000601668	PLEKHG1	Q9ULL1	1385 aa		29.92	■■■□□ 2.38
PNPLA6-223	ENST00000601668	NEXMIF	Q5QGS0	1516 aa		29.9	■■■□□ 2.38
PNPLA6-223	ENST00000601668	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.88	■■■□□ 2.37
PNPLA6-223	ENST00000601668	SLC26A8	Q96RN1	970 aa		29.87	■■■□□ 2.37
PNPLA6-223	ENST00000601668	ACIN1	Q9UKV3	1341 aa	Known RBP	29.87	■■■□□ 2.37
PNPLA6-223	ENST00000601668	NRXN3	Q9Y4C0	1643 aa		29.86	■■■□□ 2.37
PNPLA6-223	ENST00000601668	ADAMTS13	Q76LX8	1427 aa		29.86	■■■□□ 2.37
PNPLA6-223	ENST00000601668	XIRP1	Q702N8	1843 aa	Known RBP	29.85	■■■□□ 2.37
PNPLA6-223	ENST00000601668	LRRC7	Q96NW7	1537 aa		29.85	■■■□□ 2.37
PNPLA6-223	ENST00000601668	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.84	■■■□□ 2.37
PNPLA6-223	ENST00000601668	SENP3	Q9H4L4	574 aa	Predicted RBP	29.84	■■■□□ 2.37
PNPLA6-223	ENST00000601668	NWD1	Q149M9	1564 aa		29.84	■■■□□ 2.37
PNPLA6-223	ENST00000601668	PPP1R15A	O75807	674 aa	Predicted RBP	29.82	■■■□□ 2.36
PNPLA6-223	ENST00000601668	CHD2	O14647	1828 aa	Known RBP	29.82	■■■□□ 2.36
PNPLA6-223	ENST00000601668	HRC	P23327	699 aa		29.81	■■■□□ 2.36
PNPLA6-223	ENST00000601668	HDGF	P51858	240 aa	Known RBP	29.81	■■■□□ 2.36
PNPLA6-223	ENST00000601668	PPL	O60437	1756 aa		29.8	■■■□□ 2.36
PNPLA6-223	ENST00000601668	SETBP1	Q9Y6X0	1596 aa		29.8	■■■□□ 2.36
PNPLA6-223	ENST00000601668	DIP2A	Q14689	1571 aa		29.79	■■■□□ 2.36
PNPLA6-223	ENST00000601668	CCDC144A	A2RUR9	1427 aa		29.78	■■■□□ 2.36
PNPLA6-223	ENST00000601668	ZNF326	Q5BKZ1	582 aa	Known RBP	29.77	■■■□□ 2.36
PNPLA6-223	ENST00000601668	ALK	Q9UM73	1620 aa		29.77	■■■□□ 2.36
PNPLA6-223	ENST00000601668	SPATA31E1	Q6ZUB1	1445 aa		29.77	■■■□□ 2.36
PNPLA6-223	ENST00000601668	IFT172	Q9UG01	1749 aa		29.75	■■■□□ 2.35
PNPLA6-223	ENST00000601668	KCNA6	P17658	529 aa		29.74	■■■□□ 2.35
PNPLA6-223	ENST00000601668	BCAN	Q96GW7	911 aa		29.74	■■■□□ 2.35
PNPLA6-223	ENST00000601668	TBX22	Q9Y458	520 aa		29.74	■■■□□ 2.35
PNPLA6-223	ENST00000601668	SETD1A	O15047	1707 aa	Known RBP	29.71	■■■□□ 2.35
PNPLA6-223	ENST00000601668	NKTR	P30414	1462 aa	Known RBP	29.71	■■■□□ 2.35
PNPLA6-223	ENST00000601668	ANKRD30B	Q9BXX2	1392 aa		29.69	■■■□□ 2.34
PNPLA6-223	ENST00000601668	PTPRU	Q92729	1446 aa		29.68	■■■□□ 2.34
PNPLA6-223	ENST00000601668	RPGRIP1L	Q68CZ1	1315 aa		29.67	■■■□□ 2.34
PNPLA6-223	ENST00000601668	UBAP1L	F5GYI3	381 aa		29.66	■■■□□ 2.34
PNPLA6-223	ENST00000601668	XRN1	Q8IZH2	1706 aa	Known RBP	29.65	■■■□□ 2.34
PNPLA6-223	ENST00000601668	PIK3R4	Q99570	1358 aa		29.64	■■■□□ 2.34
PNPLA6-223	ENST00000601668	TMEM94	Q12767	1356 aa		29.64	■■■□□ 2.33
PNPLA6-223	ENST00000601668	MET	P08581	1390 aa		29.62	■■■□□ 2.33
PNPLA6-223	ENST00000601668	RGL3	Q3MIN7	710 aa		29.6	■■■□□ 2.33
PNPLA6-223	ENST00000601668	RBM33	Q96EV2	1170 aa	Known RBP	29.6	■■■□□ 2.33
PNPLA6-223	ENST00000601668	VGF	O15240	615 aa	Predicted RBP	29.58	■■■□□ 2.33
PNPLA6-223	ENST00000601668	PROSER2	Q86WR7	435 aa	Predicted RBP	29.58	■■■□□ 2.33
PNPLA6-223	ENST00000601668	ADGRF5	Q8IZF2	1346 aa		29.56	■■■□□ 2.32
PNPLA6-223	ENST00000601668	TOM1	O60784	492 aa		29.53	■■■□□ 2.32
PNPLA6-223	ENST00000601668	AMOTL2	Q9Y2J4	779 aa		29.53	■■■□□ 2.32
PNPLA6-223	ENST00000601668	MYOM2	P54296	1465 aa		29.49	■■■□□ 2.31
PNPLA6-223	ENST00000601668	NRXN1	Q9ULB1	1477 aa		29.49	■■■□□ 2.31
PNPLA6-223	ENST00000601668	PIK3C2G	O75747	1445 aa		29.49	■■■□□ 2.31
PNPLA6-223	ENST00000601668	ASXL1	Q8IXJ9	1541 aa		29.49	■■■□□ 2.31
PNPLA6-223	ENST00000601668	PIP4K2B	P78356	416 aa		29.48	■■■□□ 2.31
PNPLA6-223	ENST00000601668	NCOA3	Q9Y6Q9	1424 aa		29.47	■■■□□ 2.31
PNPLA6-223	ENST00000601668	TRIM26	Q12899	539 aa	Predicted RBP	29.47	■■■□□ 2.31
PNPLA6-223	ENST00000601668	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.46	■■■□□ 2.31
PNPLA6-223	ENST00000601668	PRAG1	Q86YV5	1406 aa		29.45	■■■□□ 2.31
PNPLA6-223	ENST00000601668	SCAF1	Q9H7N4	1312 aa	Known RBP	29.42	■■■□□ 2.3
PNPLA6-223	ENST00000601668	MSH6	P52701	1360 aa		29.41	■■■□□ 2.3
PNPLA6-223	ENST00000601668	DHX57	Q6P158	1386 aa	Known RBP	29.4	■■■□□ 2.3
PNPLA6-223	ENST00000601668	NALCN	Q8IZF0	1738 aa		29.4	■■■□□ 2.3
PNPLA6-223	ENST00000601668	PTCH1	Q13635	1447 aa		29.4	■■■□□ 2.3
PNPLA6-223	ENST00000601668	ROBO2	Q9HCK4	1378 aa		29.39	■■■□□ 2.29
PNPLA6-223	ENST00000601668	LAMC1	P11047	1609 aa		29.38	■■■□□ 2.29
PNPLA6-223	ENST00000601668	ROBO1	Q9Y6N7	1651 aa		29.37	■■■□□ 2.29
PNPLA6-223	ENST00000601668	KNDC1	Q76NI1	1749 aa		29.37	■■■□□ 2.29
PNPLA6-223	ENST00000601668	HSPA1L	P34931	641 aa		29.36	■■■□□ 2.29
PNPLA6-223	ENST00000601668	FAM135B	Q49AJ0	1406 aa		29.34	■■■□□ 2.29
PNPLA6-223	ENST00000601668	C14orf93	Q9H972	538 aa	Known RBP	29.33	■■■□□ 2.29
PNPLA6-223	ENST00000601668	TECPR2	O15040	1411 aa		29.33	■■■□□ 2.29
PNPLA6-223	ENST00000601668	ADGRL3	Q9HAR2	1447 aa		29.32	■■■□□ 2.28
PNPLA6-223	ENST00000601668	C19orf44	Q9H6X5	657 aa		29.32	■■■□□ 2.28
PNPLA6-223	ENST00000601668	TMEM132E	Q6IEE7	984 aa		29.31	■■■□□ 2.28
PNPLA6-223	ENST00000601668	DCC	P43146	1447 aa		29.3	■■■□□ 2.28
PNPLA6-223	ENST00000601668	LRPPRC	P42704	1394 aa	Known RBP	29.3	■■■□□ 2.28
PNPLA6-223	ENST00000601668	CFAP70	Q5T0N1	1121 aa		29.3	■■■□□ 2.28
PNPLA6-223	ENST00000601668	C14orf37	Q86TY3	774 aa		29.29	■■■□□ 2.28
PNPLA6-223	ENST00000601668	DCAF11	Q8TEB1	546 aa		29.29	■■■□□ 2.28
PNPLA6-223	ENST00000601668	ADGRB1	O14514	1584 aa		29.29	■■■□□ 2.28
PNPLA6-223	ENST00000601668	YTHDC2	Q9H6S0	1430 aa	Known RBP	29.28	■■■□□ 2.28
PNPLA6-223	ENST00000601668	SLAIN2	Q9P270	581 aa		29.27	■■■□□ 2.28
PNPLA6-223	ENST00000601668	ABCC11	Q96J66	1382 aa		29.26	■■■□□ 2.28
PNPLA6-223	ENST00000601668	KDM2A	Q9Y2K7	1162 aa		29.26	■■■□□ 2.27
PNPLA6-223	ENST00000601668	CADPS2	Q86UW7	1296 aa		29.24	■■■□□ 2.27
PNPLA6-223	ENST00000601668	MST1R	Q04912	1400 aa		29.23	■■■□□ 2.27
PNPLA6-223	ENST00000601668	STK26	Q9P289	416 aa		29.23	■■■□□ 2.27
PNPLA6-223	ENST00000601668	SIN3A	Q96ST3	1273 aa		29.22	■■■□□ 2.27
PNPLA6-223	ENST00000601668	ATF3	P18847	181 aa		29.21	■■■□□ 2.27
PNPLA6-223	ENST00000601668	STAC3	Q96MF2	364 aa		29.21	■■■□□ 2.27
PNPLA6-223	ENST00000601668	PLEKHH1	Q9ULM0	1364 aa		29.21	■■■□□ 2.27
PNPLA6-223	ENST00000601668	WAPL	Q7Z5K2	1190 aa		29.18	■■■□□ 2.26
PNPLA6-223	ENST00000601668	CDC42BPG	Q6DT37	1551 aa		29.17	■■■□□ 2.26
PNPLA6-223	ENST00000601668	PHLPP1	O60346	1717 aa		29.17	■■■□□ 2.26
PNPLA6-223	ENST00000601668	KIAA1210	Q9ULL0	1709 aa		29.17	■■■□□ 2.26
PNPLA6-223	ENST00000601668	DLC1	Q96QB1	1528 aa		29.16	■■■□□ 2.26
PNPLA6-223	ENST00000601668	COL16A1	Q07092	1604 aa	Predicted RBP	29.14	■■■□□ 2.26
PNPLA6-223	ENST00000601668	AHDC1	Q5TGY3	1603 aa	Predicted RBP	29.14	■■■□□ 2.26
PNPLA6-223	ENST00000601668	BRINP3	Q76B58	766 aa		29.12	■■■□□ 2.25
PNPLA6-223	ENST00000601668	SIRT1	Q96EB6	747 aa		29.12	■■■□□ 2.25

Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms