RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-211ENST00000601222 RIMS2Q9UQ26 1411 aa13.68□□□□□ -0.22
SIPA1L3-211ENST00000601222 SETD5Q9C0A6 1442 aa13.67□□□□□ -0.22
SIPA1L3-211ENST00000601222 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.67□□□□□ -0.22
SIPA1L3-211ENST00000601222 CLTCL1P53675 1640 aa13.67□□□□□ -0.22
SIPA1L3-211ENST00000601222 PLEKHG1Q9ULL1 1385 aa13.66□□□□□ -0.22
SIPA1L3-211ENST00000601222 KIF1BO60333 1816 aa13.66□□□□□ -0.22
SIPA1L3-211ENST00000601222 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
SIPA1L3-211ENST00000601222 SLC26A8Q96RN1 970 aa13.63□□□□□ -0.23
SIPA1L3-211ENST00000601222 MPHOSPH9Q99550 1183 aa13.63□□□□□ -0.23
SIPA1L3-211ENST00000601222 RAB3GAP2Q9H2M9 1393 aa13.62□□□□□ -0.23
SIPA1L3-211ENST00000601222 BCANQ96GW7 911 aa13.62□□□□□ -0.23
SIPA1L3-211ENST00000601222 LRRC7Q96NW7 1537 aa13.62□□□□□ -0.23
SIPA1L3-211ENST00000601222 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
SIPA1L3-211ENST00000601222 KCNA6P17658 529 aa13.61□□□□□ -0.23
SIPA1L3-211ENST00000601222 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 FOXD1Q16676 465 aa13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 TBX22Q9Y458 520 aa13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 XIRP1Q702N8 1843 aaKnown RBP13.6□□□□□ -0.23
SIPA1L3-211ENST00000601222 DIP2AQ14689 1571 aa13.59□□□□□ -0.23
SIPA1L3-211ENST00000601222 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
SIPA1L3-211ENST00000601222 ADAMTS13Q76LX8 1427 aa13.59□□□□□ -0.23
SIPA1L3-211ENST00000601222 NEXMIFQ5QGS0 1516 aa13.59□□□□□ -0.23
SIPA1L3-211ENST00000601222 TOM1O60784 492 aa13.58□□□□□ -0.24
SIPA1L3-211ENST00000601222 HRCP23327 699 aa13.58□□□□□ -0.24
SIPA1L3-211ENST00000601222 SENP3Q9H4L4 574 aaPredicted RBP13.58□□□□□ -0.24
SIPA1L3-211ENST00000601222 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
SIPA1L3-211ENST00000601222 SETBP1Q9Y6X0 1596 aa13.57□□□□□ -0.24
SIPA1L3-211ENST00000601222 PIK3R4Q99570 1358 aa13.57□□□□□ -0.24
SIPA1L3-211ENST00000601222 NRXN3Q9Y4C0 1643 aa13.57□□□□□ -0.24
SIPA1L3-211ENST00000601222 CCDC144AA2RUR9 1427 aa13.56□□□□□ -0.24
SIPA1L3-211ENST00000601222 RPGRIP1LQ68CZ1 1315 aa13.56□□□□□ -0.24
SIPA1L3-211ENST00000601222 ALKQ9UM73 1620 aa13.55□□□□□ -0.24
SIPA1L3-211ENST00000601222 PPLO60437 1756 aa13.55□□□□□ -0.24
SIPA1L3-211ENST00000601222 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
SIPA1L3-211ENST00000601222 TMEM94Q12767 1356 aa13.54□□□□□ -0.24
SIPA1L3-211ENST00000601222 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
SIPA1L3-211ENST00000601222 SPATA31E1Q6ZUB1 1445 aa13.52□□□□□ -0.25
SIPA1L3-211ENST00000601222 PIP4K2BP78356 416 aa13.51□□□□□ -0.25
SIPA1L3-211ENST00000601222 PTPRUQ92729 1446 aa13.5□□□□□ -0.25
SIPA1L3-211ENST00000601222 SCAF1Q9H7N4 1312 aaKnown RBP13.5□□□□□ -0.25
SIPA1L3-211ENST00000601222 AMOTL2Q9Y2J4 779 aa13.5□□□□□ -0.25
SIPA1L3-211ENST00000601222 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
SIPA1L3-211ENST00000601222 NCOA3Q9Y6Q9 1424 aa13.49□□□□□ -0.25
SIPA1L3-211ENST00000601222 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
SIPA1L3-211ENST00000601222 SETD1AO15047 1707 aaKnown RBP13.49□□□□□ -0.25
SIPA1L3-211ENST00000601222 XRN1Q8IZH2 1706 aaKnown RBP13.49□□□□□ -0.25
SIPA1L3-211ENST00000601222 METP08581 1390 aa13.48□□□□□ -0.25
SIPA1L3-211ENST00000601222 ANKRD30BQ9BXX2 1392 aa13.48□□□□□ -0.25
SIPA1L3-211ENST00000601222 RGL3Q3MIN7 710 aa13.48□□□□□ -0.25
SIPA1L3-211ENST00000601222 MSH6P52701 1360 aa13.47□□□□□ -0.25
SIPA1L3-211ENST00000601222 HSPA1LP34931 641 aa13.45□□□□□ -0.26
SIPA1L3-211ENST00000601222 ADGRF5Q8IZF2 1346 aa13.44□□□□□ -0.26
SIPA1L3-211ENST00000601222 FAM135BQ49AJ0 1406 aa13.44□□□□□ -0.26
SIPA1L3-211ENST00000601222 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.44□□□□□ -0.26
SIPA1L3-211ENST00000601222 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
SIPA1L3-211ENST00000601222 C14orf37Q86TY3 774 aa13.42□□□□□ -0.26
SIPA1L3-211ENST00000601222 PIK3C2GO75747 1445 aa13.41□□□□□ -0.26
SIPA1L3-211ENST00000601222 PTCH1Q13635 1447 aa13.41□□□□□ -0.26
SIPA1L3-211ENST00000601222 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
SIPA1L3-211ENST00000601222 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
SIPA1L3-211ENST00000601222 MYOM2P54296 1465 aa13.41□□□□□ -0.26
SIPA1L3-211ENST00000601222 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
SIPA1L3-211ENST00000601222 CADPS2Q86UW7 1296 aa13.4□□□□□ -0.26
SIPA1L3-211ENST00000601222 NRXN1Q9ULB1 1477 aa13.4□□□□□ -0.26
SIPA1L3-211ENST00000601222 DCCP43146 1447 aa13.39□□□□□ -0.27
SIPA1L3-211ENST00000601222 ATF3P18847 181 aa13.39□□□□□ -0.27
SIPA1L3-211ENST00000601222 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
SIPA1L3-211ENST00000601222 ADGRL3Q9HAR2 1447 aa13.38□□□□□ -0.27
SIPA1L3-211ENST00000601222 NALCNQ8IZF0 1738 aa13.37□□□□□ -0.27
SIPA1L3-211ENST00000601222 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
SIPA1L3-211ENST00000601222 C14orf93Q9H972 538 aaKnown RBP13.37□□□□□ -0.27
SIPA1L3-211ENST00000601222 LAMC1P11047 1609 aa13.37□□□□□ -0.27
SIPA1L3-211ENST00000601222 ASXL1Q8IXJ9 1541 aa13.36□□□□□ -0.27
SIPA1L3-211ENST00000601222 TECPR2O15040 1411 aa13.36□□□□□ -0.27
SIPA1L3-211ENST00000601222 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
SIPA1L3-211ENST00000601222 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
SIPA1L3-211ENST00000601222 ABCC11Q96J66 1382 aa13.35□□□□□ -0.27
SIPA1L3-211ENST00000601222 TRIM26Q12899 539 aaPredicted RBP13.35□□□□□ -0.27
SIPA1L3-211ENST00000601222 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
SIPA1L3-211ENST00000601222 DCAF11Q8TEB1 546 aa13.34□□□□□ -0.27
SIPA1L3-211ENST00000601222 DHX57Q6P158 1386 aaKnown RBP13.33□□□□□ -0.27
SIPA1L3-211ENST00000601222 MST1RQ04912 1400 aa13.33□□□□□ -0.28
SIPA1L3-211ENST00000601222 YTHDC2Q9H6S0 1430 aaKnown RBP13.33□□□□□ -0.28
SIPA1L3-211ENST00000601222 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
SIPA1L3-211ENST00000601222 STK26Q9P289 416 aa13.33□□□□□ -0.28
SIPA1L3-211ENST00000601222 PHLPP1O60346 1717 aa13.33□□□□□ -0.28
SIPA1L3-211ENST00000601222 KDM2AQ9Y2K7 1162 aa13.32□□□□□ -0.28
SIPA1L3-211ENST00000601222 DISP3Q9P2K9 1392 aa13.32□□□□□ -0.28
SIPA1L3-211ENST00000601222 BRINP3Q76B58 766 aa13.31□□□□□ -0.28
SIPA1L3-211ENST00000601222 SIRT1Q96EB6 747 aa13.31□□□□□ -0.28
SIPA1L3-211ENST00000601222 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
SIPA1L3-211ENST00000601222 MED1Q15648 1581 aaPredicted RBP13.3□□□□□ -0.28
SIPA1L3-211ENST00000601222 ADGRB1O14514 1584 aa13.29□□□□□ -0.28
SIPA1L3-211ENST00000601222 COL16A1Q07092 1604 aaPredicted RBP13.29□□□□□ -0.28
SIPA1L3-211ENST00000601222 WAPLQ7Z5K2 1190 aa13.29□□□□□ -0.28
SIPA1L3-211ENST00000601222 CDC42BPGQ6DT37 1551 aa13.28□□□□□ -0.28
SIPA1L3-211ENST00000601222 PLEKHH1Q9ULM0 1364 aa13.28□□□□□ -0.28
SIPA1L3-211ENST00000601222 C1orf167Q5SNV9 1468 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms