RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 RBM33Q96EV2 1170 aaKnown RBP27.68■■■□□ 2.02
CHMP2A-208ENST00000601220 PLEKHG1Q9ULL1 1385 aa27.68■■■□□ 2.02
CHMP2A-208ENST00000601220 RIMS2Q9UQ26 1411 aa27.67■■■□□ 2.02
CHMP2A-208ENST00000601220 TMEM131LA2VDJ0 1609 aa27.67■■■□□ 2.02
CHMP2A-208ENST00000601220 GCC2Q8IWJ2 1684 aa27.66■■■□□ 2.02
CHMP2A-208ENST00000601220 NWD1Q149M9 1564 aa27.66■■■□□ 2.02
CHMP2A-208ENST00000601220 NKTRP30414 1462 aaKnown RBP27.64■■■□□ 2.02
CHMP2A-208ENST00000601220 PPARGC1BQ86YN6 1023 aaKnown RBP27.64■■■□□ 2.02
CHMP2A-208ENST00000601220 E9PCH4 1651 aa27.63■■■□□ 2.01
CHMP2A-208ENST00000601220 HDGFP51858 240 aaKnown RBP27.63■■■□□ 2.01
CHMP2A-208ENST00000601220 BCANQ96GW7 911 aa27.63■■■□□ 2.01
CHMP2A-208ENST00000601220 NUP155O75694 1391 aa27.62■■■□□ 2.01
CHMP2A-208ENST00000601220 IQGAP3Q86VI3 1631 aa27.62■■■□□ 2.01
CHMP2A-208ENST00000601220 ITGAEP38570 1179 aa27.61■■■□□ 2.01
CHMP2A-208ENST00000601220 TBX22Q9Y458 520 aa27.61■■■□□ 2.01
CHMP2A-208ENST00000601220 MYO5BQ9ULV0 1848 aa27.6■■■□□ 2.01
CHMP2A-208ENST00000601220 PPP1R15AO75807 674 aaPredicted RBP27.59■■■□□ 2.01
CHMP2A-208ENST00000601220 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.59■■■□□ 2.01
CHMP2A-208ENST00000601220 CHGAP10645 457 aaKnown RBP27.58■■■□□ 2.01
CHMP2A-208ENST00000601220 PHF23Q9BUL5 403 aaPredicted RBP27.58■■■□□ 2.01
CHMP2A-208ENST00000601220 ADAMTS13Q76LX8 1427 aa27.57■■■□□ 2
CHMP2A-208ENST00000601220 NUTM2DQ5VT03 806 aaPredicted RBP27.55■■■□□ 2
CHMP2A-208ENST00000601220 RGS17Q9UGC6 210 aaPredicted RBP27.55■■■□□ 2
CHMP2A-208ENST00000601220 CHD2O14647 1828 aaKnown RBP27.53■■■□□ 2
CHMP2A-208ENST00000601220 MSH6P52701 1360 aa27.52■■■□□ 2
CHMP2A-208ENST00000601220 SLAIN2Q9P270 581 aa27.52■■■□□ 2
CHMP2A-208ENST00000601220 ROBO1Q9Y6N7 1651 aa27.51■■□□□ 1.99
CHMP2A-208ENST00000601220 NCOA3Q9Y6Q9 1424 aa27.5■■□□□ 1.99
CHMP2A-208ENST00000601220 PIK3R4Q99570 1358 aa27.48■■□□□ 1.99
CHMP2A-208ENST00000601220 RRBP1Q9P2E9 1410 aaKnown RBP27.46■■□□□ 1.99
CHMP2A-208ENST00000601220 DIP2AQ14689 1571 aa27.44■■□□□ 1.98
CHMP2A-208ENST00000601220 PTPRUQ92729 1446 aa27.42■■□□□ 1.98
CHMP2A-208ENST00000601220 AMOTL2Q9Y2J4 779 aa27.4■■□□□ 1.98
CHMP2A-208ENST00000601220 C19orf44Q9H6X5 657 aa27.39■■□□□ 1.98
CHMP2A-208ENST00000601220 NAIPQ13075 1403 aa27.39■■□□□ 1.97
CHMP2A-208ENST00000601220 TRPM2O94759 1503 aa27.36■■□□□ 1.97
CHMP2A-208ENST00000601220 NRXN3Q9Y4C0 1643 aa27.35■■□□□ 1.97
CHMP2A-208ENST00000601220 POTEAQ6S8J7 498 aa27.35■■□□□ 1.97
CHMP2A-208ENST00000601220 CADPS2Q86UW7 1296 aa27.35■■□□□ 1.97
CHMP2A-208ENST00000601220 SPHKAPQ2M3C7 1700 aa27.35■■□□□ 1.97
CHMP2A-208ENST00000601220 C14orf37Q86TY3 774 aa27.34■■□□□ 1.97
CHMP2A-208ENST00000601220 SETBP1Q9Y6X0 1596 aa27.34■■□□□ 1.97
CHMP2A-208ENST00000601220 JCADQ9P266 1359 aa27.33■■□□□ 1.97
CHMP2A-208ENST00000601220 PHLPP1O60346 1717 aa27.31■■□□□ 1.96
CHMP2A-208ENST00000601220 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.31■■□□□ 1.96
CHMP2A-208ENST00000601220 ZNF326Q5BKZ1 582 aaKnown RBP27.31■■□□□ 1.96
CHMP2A-208ENST00000601220 METP08581 1390 aa27.31■■□□□ 1.96
CHMP2A-208ENST00000601220 ATF3P18847 181 aa27.3■■□□□ 1.96
CHMP2A-208ENST00000601220 COL16A1Q07092 1604 aaPredicted RBP27.3■■□□□ 1.96
CHMP2A-208ENST00000601220 CLTCL1P53675 1640 aa27.29■■□□□ 1.96
CHMP2A-208ENST00000601220 XRN1Q8IZH2 1706 aaKnown RBP27.27■■□□□ 1.96
CHMP2A-208ENST00000601220 NEXMIFQ5QGS0 1516 aa27.26■■□□□ 1.96
CHMP2A-208ENST00000601220 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
CHMP2A-208ENST00000601220 BRINP3Q76B58 766 aa27.25■■□□□ 1.95
CHMP2A-208ENST00000601220 AHDC1Q5TGY3 1603 aaPredicted RBP27.24■■□□□ 1.95
CHMP2A-208ENST00000601220 DCCP43146 1447 aa27.24■■□□□ 1.95
CHMP2A-208ENST00000601220 SPATA31A6Q5VVP1 1343 aa27.2■■□□□ 1.95
CHMP2A-208ENST00000601220 LRP6O75581 1613 aa27.19■■□□□ 1.94
CHMP2A-208ENST00000601220 TRIM52Q96A61 297 aa27.19■■□□□ 1.94
CHMP2A-208ENST00000601220 MST1RQ04912 1400 aa27.18■■□□□ 1.94
CHMP2A-208ENST00000601220 SLC4A1APQ9BWU0 796 aaKnown RBP27.15■■□□□ 1.94
CHMP2A-208ENST00000601220 VGFO15240 615 aaPredicted RBP27.14■■□□□ 1.94
CHMP2A-208ENST00000601220 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
CHMP2A-208ENST00000601220 ASXL1Q8IXJ9 1541 aa27.13■■□□□ 1.93
CHMP2A-208ENST00000601220 RPGRIP1LQ68CZ1 1315 aa27.13■■□□□ 1.93
CHMP2A-208ENST00000601220 KIF1BO60333 1816 aa27.11■■□□□ 1.93
CHMP2A-208ENST00000601220 SHPRHQ149N8 1683 aa27.11■■□□□ 1.93
CHMP2A-208ENST00000601220 SETD5Q9C0A6 1442 aa27.1■■□□□ 1.93
CHMP2A-208ENST00000601220 ROBO2Q9HCK4 1378 aa27.08■■□□□ 1.93
CHMP2A-208ENST00000601220 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
CHMP2A-208ENST00000601220 FOXD1Q16676 465 aa27.07■■□□□ 1.92
CHMP2A-208ENST00000601220 SETD1AO15047 1707 aaKnown RBP27.07■■□□□ 1.92
CHMP2A-208ENST00000601220 PRAG1Q86YV5 1406 aa27.07■■□□□ 1.92
CHMP2A-208ENST00000601220 DDX17Q92841 729 aaKnown RBP27.06■■□□□ 1.92
CHMP2A-208ENST00000601220 MEX3CQ5U5Q3 659 aaKnown RBP27.05■■□□□ 1.92
CHMP2A-208ENST00000601220 NALCNQ8IZF0 1738 aa27.04■■□□□ 1.92
CHMP2A-208ENST00000601220 ZNF772Q68DY9 489 aaPredicted RBP27.04■■□□□ 1.92
CHMP2A-208ENST00000601220 NHSL1Q5SYE7 1610 aa27.04■■□□□ 1.92
CHMP2A-208ENST00000601220 LRRC59Q96AG4 307 aaKnown RBP27.03■■□□□ 1.92
CHMP2A-208ENST00000601220 C1orf167Q5SNV9 1468 aa27.02■■□□□ 1.92
CHMP2A-208ENST00000601220 NUTM2BA6NNL0 878 aaPredicted RBP27.01■■□□□ 1.91
CHMP2A-208ENST00000601220 NUTM2EB1AL46 878 aaPredicted RBP27.01■■□□□ 1.91
CHMP2A-208ENST00000601220 NUTM2AQ8IVF1 878 aaPredicted RBP27.01■■□□□ 1.91
CHMP2A-208ENST00000601220 ADGRF5Q8IZF2 1346 aa26.98■■□□□ 1.91
CHMP2A-208ENST00000601220 MPHOSPH9Q99550 1183 aa26.98■■□□□ 1.91
CHMP2A-208ENST00000601220 PPLO60437 1756 aa26.98■■□□□ 1.91
CHMP2A-208ENST00000601220 SPATA31E1Q6ZUB1 1445 aa26.98■■□□□ 1.91
CHMP2A-208ENST00000601220 PNPLA6Q8IY17 1366 aa26.97■■□□□ 1.91
CHMP2A-208ENST00000601220 ORAI2Q96SN7 254 aa26.97■■□□□ 1.91
CHMP2A-208ENST00000601220 CCDC144AA2RUR9 1427 aa26.94■■□□□ 1.9
CHMP2A-208ENST00000601220 SOS2Q07890 1332 aaPredicted RBP26.93■■□□□ 1.9
CHMP2A-208ENST00000601220 LAMC1P11047 1609 aa26.93■■□□□ 1.9
CHMP2A-208ENST00000601220 RGL3Q3MIN7 710 aa26.92■■□□□ 1.9
CHMP2A-208ENST00000601220 AFF2P51816 1311 aa26.91■■□□□ 1.9
CHMP2A-208ENST00000601220 RXRBP28702 533 aa26.9■■□□□ 1.9
CHMP2A-208ENST00000601220 ANKRD30BQ9BXX2 1392 aa26.89■■□□□ 1.9
CHMP2A-208ENST00000601220 TECPR2O15040 1411 aa26.87■■□□□ 1.89
CHMP2A-208ENST00000601220 C8orf37Q96NL8 207 aa26.86■■□□□ 1.89
CHMP2A-208ENST00000601220 LRPPRCP42704 1394 aaKnown RBP26.85■■□□□ 1.89
CHMP2A-208ENST00000601220 UPF1Q92900 1129 aaKnown RBP eCLIP26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms