RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 BCANQ96GW7 911 aa25.25■■□□□ 1.63
NOTCH3-205ENST00000600841 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
NOTCH3-205ENST00000600841 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.23■■□□□ 1.63
NOTCH3-205ENST00000600841 SLC26A8Q96RN1 970 aa25.23■■□□□ 1.63
NOTCH3-205ENST00000600841 PLEKHG1Q9ULL1 1385 aa25.22■■□□□ 1.63
NOTCH3-205ENST00000600841 TOM1O60784 492 aa25.2■■□□□ 1.62
NOTCH3-205ENST00000600841 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
NOTCH3-205ENST00000600841 TRPM2O94759 1503 aa25.19■■□□□ 1.62
NOTCH3-205ENST00000600841 SENP3Q9H4L4 574 aaPredicted RBP25.18■■□□□ 1.62
NOTCH3-205ENST00000600841 CLTCL1P53675 1640 aa25.16■■□□□ 1.62
NOTCH3-205ENST00000600841 KCNA6P17658 529 aa25.16■■□□□ 1.62
NOTCH3-205ENST00000600841 NUTM2DQ5VT03 806 aaPredicted RBP25.16■■□□□ 1.62
NOTCH3-205ENST00000600841 SCAF1Q9H7N4 1312 aaKnown RBP25.13■■□□□ 1.61
NOTCH3-205ENST00000600841 PIP4K2BP78356 416 aa25.13■■□□□ 1.61
NOTCH3-205ENST00000600841 ZNF326Q5BKZ1 582 aaKnown RBP25.13■■□□□ 1.61
NOTCH3-205ENST00000600841 KIF1BO60333 1816 aa25.12■■□□□ 1.61
NOTCH3-205ENST00000600841 NWD1Q149M9 1564 aa25.11■■□□□ 1.61
NOTCH3-205ENST00000600841 TBX22Q9Y458 520 aa25.11■■□□□ 1.61
NOTCH3-205ENST00000600841 XIRP1Q702N8 1843 aaKnown RBP25.11■■□□□ 1.61
NOTCH3-205ENST00000600841 SETD5Q9C0A6 1442 aa25.09■■□□□ 1.61
NOTCH3-205ENST00000600841 CHD2O14647 1828 aaKnown RBP25.09■■□□□ 1.61
NOTCH3-205ENST00000600841 DIP2AQ14689 1571 aa25.09■■□□□ 1.61
NOTCH3-205ENST00000600841 ACIN1Q9UKV3 1341 aaKnown RBP25.09■■□□□ 1.61
NOTCH3-205ENST00000600841 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
NOTCH3-205ENST00000600841 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
NOTCH3-205ENST00000600841 PROSER2Q86WR7 435 aaPredicted RBP25.08■■□□□ 1.61
NOTCH3-205ENST00000600841 ADAMTS13Q76LX8 1427 aa25.08■■□□□ 1.61
NOTCH3-205ENST00000600841 TMEM94Q12767 1356 aa25.07■■□□□ 1.6
NOTCH3-205ENST00000600841 MPHOSPH9Q99550 1183 aa25.06■■□□□ 1.6
NOTCH3-205ENST00000600841 FOXD1Q16676 465 aa25.05■■□□□ 1.6
NOTCH3-205ENST00000600841 NEXMIFQ5QGS0 1516 aa25.03■■□□□ 1.6
NOTCH3-205ENST00000600841 PIK3R4Q99570 1358 aa25.03■■□□□ 1.6
NOTCH3-205ENST00000600841 SETBP1Q9Y6X0 1596 aa25.01■■□□□ 1.59
NOTCH3-205ENST00000600841 RBM33Q96EV2 1170 aaKnown RBP25.01■■□□□ 1.59
NOTCH3-205ENST00000600841 NRXN3Q9Y4C0 1643 aa25■■□□□ 1.59
NOTCH3-205ENST00000600841 HSPA1LP34931 641 aa24.99■■□□□ 1.59
NOTCH3-205ENST00000600841 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
NOTCH3-205ENST00000600841 CCDC144AA2RUR9 1427 aa24.98■■□□□ 1.59
NOTCH3-205ENST00000600841 MSH6P52701 1360 aa24.95■■□□□ 1.59
NOTCH3-205ENST00000600841 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
NOTCH3-205ENST00000600841 VGFO15240 615 aaPredicted RBP24.94■■□□□ 1.58
NOTCH3-205ENST00000600841 AMOTL2Q9Y2J4 779 aa24.93■■□□□ 1.58
NOTCH3-205ENST00000600841 PTPRUQ92729 1446 aa24.93■■□□□ 1.58
NOTCH3-205ENST00000600841 NCOA3Q9Y6Q9 1424 aa24.92■■□□□ 1.58
NOTCH3-205ENST00000600841 PPLO60437 1756 aa24.92■■□□□ 1.58
NOTCH3-205ENST00000600841 C14orf37Q86TY3 774 aa24.9■■□□□ 1.58
NOTCH3-205ENST00000600841 METP08581 1390 aa24.9■■□□□ 1.58
NOTCH3-205ENST00000600841 DISP3Q9P2K9 1392 aa24.89■■□□□ 1.57
NOTCH3-205ENST00000600841 XRN1Q8IZH2 1706 aaKnown RBP24.89■■□□□ 1.57
NOTCH3-205ENST00000600841 FAM135BQ49AJ0 1406 aa24.87■■□□□ 1.57
NOTCH3-205ENST00000600841 SPATA31E1Q6ZUB1 1445 aa24.87■■□□□ 1.57
NOTCH3-205ENST00000600841 RGL3Q3MIN7 710 aa24.86■■□□□ 1.57
NOTCH3-205ENST00000600841 HRCP23327 699 aa24.84■■□□□ 1.57
NOTCH3-205ENST00000600841 ROBO1Q9Y6N7 1651 aa24.83■■□□□ 1.57
NOTCH3-205ENST00000600841 C19orf44Q9H6X5 657 aa24.83■■□□□ 1.57
NOTCH3-205ENST00000600841 SLAIN2Q9P270 581 aa24.83■■□□□ 1.57
NOTCH3-205ENST00000600841 SETD1AO15047 1707 aaKnown RBP24.82■■□□□ 1.56
NOTCH3-205ENST00000600841 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.82■■□□□ 1.56
NOTCH3-205ENST00000600841 ANKRD30BQ9BXX2 1392 aa24.81■■□□□ 1.56
NOTCH3-205ENST00000600841 IFT172Q9UG01 1749 aa24.81■■□□□ 1.56
NOTCH3-205ENST00000600841 ATF3P18847 181 aa24.8■■□□□ 1.56
NOTCH3-205ENST00000600841 CADPS2Q86UW7 1296 aa24.8■■□□□ 1.56
NOTCH3-205ENST00000600841 ADGRF5Q8IZF2 1346 aa24.78■■□□□ 1.56
NOTCH3-205ENST00000600841 DCCP43146 1447 aa24.75■■□□□ 1.55
NOTCH3-205ENST00000600841 PTCH1Q13635 1447 aa24.74■■□□□ 1.55
NOTCH3-205ENST00000600841 MED1Q15648 1581 aaPredicted RBP24.74■■□□□ 1.55
NOTCH3-205ENST00000600841 PRAG1Q86YV5 1406 aa24.71■■□□□ 1.55
NOTCH3-205ENST00000600841 ADGRL3Q9HAR2 1447 aa24.71■■□□□ 1.55
NOTCH3-205ENST00000600841 PIK3C2GO75747 1445 aa24.7■■□□□ 1.55
NOTCH3-205ENST00000600841 ROBO2Q9HCK4 1378 aa24.7■■□□□ 1.55
NOTCH3-205ENST00000600841 PHLPP1O60346 1717 aa24.69■■□□□ 1.54
NOTCH3-205ENST00000600841 NALCNQ8IZF0 1738 aa24.69■■□□□ 1.54
NOTCH3-205ENST00000600841 MYOM2P54296 1465 aa24.67■■□□□ 1.54
NOTCH3-205ENST00000600841 NRXN1Q9ULB1 1477 aa24.64■■□□□ 1.54
NOTCH3-205ENST00000600841 MST1RQ04912 1400 aa24.64■■□□□ 1.54
NOTCH3-205ENST00000600841 ILDR2Q71H61 639 aa24.63■■□□□ 1.53
NOTCH3-205ENST00000600841 STK26Q9P289 416 aa24.63■■□□□ 1.53
NOTCH3-205ENST00000600841 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
NOTCH3-205ENST00000600841 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
NOTCH3-205ENST00000600841 LRPPRCP42704 1394 aaKnown RBP24.62■■□□□ 1.53
NOTCH3-205ENST00000600841 ASXL1Q8IXJ9 1541 aa24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 PHF23Q9BUL5 403 aaPredicted RBP24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 C14orf93Q9H972 538 aaKnown RBP24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 LAMC1P11047 1609 aa24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 COL16A1Q07092 1604 aaPredicted RBP24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 TECPR2O15040 1411 aa24.61■■□□□ 1.53
NOTCH3-205ENST00000600841 ABCC11Q96J66 1382 aa24.59■■□□□ 1.53
NOTCH3-205ENST00000600841 KNDC1Q76NI1 1749 aa24.59■■□□□ 1.53
NOTCH3-205ENST00000600841 YTHDC2Q9H6S0 1430 aaKnown RBP24.58■■□□□ 1.53
NOTCH3-205ENST00000600841 JCADQ9P266 1359 aa24.57■■□□□ 1.52
NOTCH3-205ENST00000600841 CFAP70Q5T0N1 1121 aa24.57■■□□□ 1.52
NOTCH3-205ENST00000600841 DCAF11Q8TEB1 546 aa24.55■■□□□ 1.52
NOTCH3-205ENST00000600841 KDM2AQ9Y2K7 1162 aa24.55■■□□□ 1.52
NOTCH3-205ENST00000600841 C1orf167Q5SNV9 1468 aa24.55■■□□□ 1.52
NOTCH3-205ENST00000600841 DHX57Q6P158 1386 aaKnown RBP24.54■■□□□ 1.52
NOTCH3-205ENST00000600841 WAPLQ7Z5K2 1190 aa24.54■■□□□ 1.52
NOTCH3-205ENST00000600841 STAC3Q96MF2 364 aa24.54■■□□□ 1.52
NOTCH3-205ENST00000600841 CDC42BPGQ6DT37 1551 aa24.52■■□□□ 1.52
NOTCH3-205ENST00000600841 NHSL1Q5SYE7 1610 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms