RNA–Protein interactions for RNA: ENST00000600660.1

PHLDB3-208, Transcript of pleckstrin homology like domain family B member 3, human

TSL 3

Gene PHLDB3, Length 696 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHLDB3-208	ENST00000600660	RPRD2	Q5VT52	1461 aa	Known RBP	29.37	■■■□□ 2.29
PHLDB3-208	ENST00000600660	NWD1	Q149M9	1564 aa		29.37	■■■□□ 2.29
PHLDB3-208	ENST00000600660	ZFYVE9	O95405	1425 aa		29.37	■■■□□ 2.29
PHLDB3-208	ENST00000600660	BCAN	Q96GW7	911 aa		29.35	■■■□□ 2.29
PHLDB3-208	ENST00000600660	ROBO1	Q9Y6N7	1651 aa		29.34	■■■□□ 2.29
PHLDB3-208	ENST00000600660	GCC2	Q8IWJ2	1684 aa		29.34	■■■□□ 2.29
PHLDB3-208	ENST00000600660	NKTR	P30414	1462 aa	Known RBP	29.33	■■■□□ 2.29
PHLDB3-208	ENST00000600660	TMEM131L	A2VDJ0	1609 aa		29.31	■■■□□ 2.28
PHLDB3-208	ENST00000600660	RIMS2	Q9UQ26	1411 aa		29.31	■■■□□ 2.28
PHLDB3-208	ENST00000600660	PLEKHG1	Q9ULL1	1385 aa		29.3	■■■□□ 2.28
PHLDB3-208	ENST00000600660	UNC13B	O14795	1591 aa		29.3	■■■□□ 2.28
PHLDB3-208	ENST00000600660	CHD2	O14647	1828 aa	Known RBP	29.28	■■■□□ 2.28
PHLDB3-208	ENST00000600660		E9PCH4	1651 aa		29.25	■■■□□ 2.27
PHLDB3-208	ENST00000600660	PPP1R15A	O75807	674 aa	Predicted RBP	29.24	■■■□□ 2.27
PHLDB3-208	ENST00000600660	MSH6	P52701	1360 aa		29.24	■■■□□ 2.27
PHLDB3-208	ENST00000600660	CHGA	P10645	457 aa	Known RBP	29.23	■■■□□ 2.27
PHLDB3-208	ENST00000600660	NUTM2D	Q5VT03	806 aa	Predicted RBP	29.23	■■■□□ 2.27
PHLDB3-208	ENST00000600660	SLAIN2	Q9P270	581 aa		29.22	■■■□□ 2.27
PHLDB3-208	ENST00000600660	POTEA	Q6S8J7	498 aa		29.21	■■■□□ 2.27
PHLDB3-208	ENST00000600660	TBX22	Q9Y458	520 aa		29.2	■■■□□ 2.26
PHLDB3-208	ENST00000600660	ADAMTS13	Q76LX8	1427 aa		29.2	■■■□□ 2.26
PHLDB3-208	ENST00000600660	ROCK1	Q13464	1354 aa		29.19	■■■□□ 2.26
PHLDB3-208	ENST00000600660	HDGF	P51858	240 aa	Known RBP	29.18	■■■□□ 2.26
PHLDB3-208	ENST00000600660	IQGAP3	Q86VI3	1631 aa		29.18	■■■□□ 2.26
PHLDB3-208	ENST00000600660	PHLPP1	O60346	1717 aa		29.16	■■■□□ 2.26
PHLDB3-208	ENST00000600660	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	29.15	■■■□□ 2.26
PHLDB3-208	ENST00000600660	NUP155	O75694	1391 aa		29.13	■■■□□ 2.25
PHLDB3-208	ENST00000600660	ITGAE	P38570	1179 aa		29.12	■■■□□ 2.25
PHLDB3-208	ENST00000600660	PPARGC1B	Q86YN6	1023 aa	Known RBP	29.09	■■■□□ 2.25
PHLDB3-208	ENST00000600660	NCOA3	Q9Y6Q9	1424 aa		29.09	■■■□□ 2.25
PHLDB3-208	ENST00000600660	COL16A1	Q07092	1604 aa	Predicted RBP	29.09	■■■□□ 2.25
PHLDB3-208	ENST00000600660	JCAD	Q9P266	1359 aa		29.08	■■■□□ 2.25
PHLDB3-208	ENST00000600660	DIP2A	Q14689	1571 aa		29.08	■■■□□ 2.25
PHLDB3-208	ENST00000600660	C14orf37	Q86TY3	774 aa		29.07	■■■□□ 2.24
PHLDB3-208	ENST00000600660	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	29.07	■■■□□ 2.24
PHLDB3-208	ENST00000600660	PTPRU	Q92729	1446 aa		29.06	■■■□□ 2.24
PHLDB3-208	ENST00000600660	PIK3R4	Q99570	1358 aa		29.04	■■■□□ 2.24
PHLDB3-208	ENST00000600660	C19orf44	Q9H6X5	657 aa		29.02	■■■□□ 2.24
PHLDB3-208	ENST00000600660	AMOTL2	Q9Y2J4	779 aa		29.02	■■■□□ 2.24
PHLDB3-208	ENST00000600660	TRPM2	O94759	1503 aa		29.01	■■■□□ 2.23
PHLDB3-208	ENST00000600660	LRP6	O75581	1613 aa		29	■■■□□ 2.23
PHLDB3-208	ENST00000600660	NRXN3	Q9Y4C0	1643 aa		29	■■■□□ 2.23
PHLDB3-208	ENST00000600660	CADPS2	Q86UW7	1296 aa		28.99	■■■□□ 2.23
PHLDB3-208	ENST00000600660	ATF3	P18847	181 aa		28.98	■■■□□ 2.23
PHLDB3-208	ENST00000600660	SPHKAP	Q2M3C7	1700 aa		28.97	■■■□□ 2.23
PHLDB3-208	ENST00000600660	AHDC1	Q5TGY3	1603 aa	Predicted RBP	28.97	■■■□□ 2.23
PHLDB3-208	ENST00000600660	SETD1A	O15047	1707 aa	Known RBP	28.97	■■■□□ 2.23
PHLDB3-208	ENST00000600660	XRN1	Q8IZH2	1706 aa	Known RBP	28.94	■■■□□ 2.22
PHLDB3-208	ENST00000600660	BRINP3	Q76B58	766 aa		28.93	■■■□□ 2.22
PHLDB3-208	ENST00000600660	SETBP1	Q9Y6X0	1596 aa		28.92	■■■□□ 2.22
PHLDB3-208	ENST00000600660	SPATA31A6	Q5VVP1	1343 aa		28.92	■■■□□ 2.22
PHLDB3-208	ENST00000600660	MET	P08581	1390 aa		28.91	■■■□□ 2.22
PHLDB3-208	ENST00000600660	ZNF326	Q5BKZ1	582 aa	Known RBP	28.9	■■■□□ 2.22
PHLDB3-208	ENST00000600660	SHPRH	Q149N8	1683 aa		28.89	■■■□□ 2.22
PHLDB3-208	ENST00000600660	CLTCL1	P53675	1640 aa		28.87	■■■□□ 2.21
PHLDB3-208	ENST00000600660	DCC	P43146	1447 aa		28.86	■■■□□ 2.21
PHLDB3-208	ENST00000600660	MEX3C	Q5U5Q3	659 aa	Known RBP	28.85	■■■□□ 2.21
PHLDB3-208	ENST00000600660	MST1R	Q04912	1400 aa		28.85	■■■□□ 2.21
PHLDB3-208	ENST00000600660	NEXMIF	Q5QGS0	1516 aa		28.84	■■■□□ 2.21
PHLDB3-208	ENST00000600660	ASXL1	Q8IXJ9	1541 aa		28.84	■■■□□ 2.21
PHLDB3-208	ENST00000600660	NAIP	Q13075	1403 aa		28.79	■■■□□ 2.2
PHLDB3-208	ENST00000600660	NUTM2B	A6NNL0	878 aa	Predicted RBP	28.79	■■■□□ 2.2
PHLDB3-208	ENST00000600660	NUTM2E	B1AL46	878 aa	Predicted RBP	28.79	■■■□□ 2.2
PHLDB3-208	ENST00000600660	ZNF772	Q68DY9	489 aa	Predicted RBP	28.79	■■■□□ 2.2
PHLDB3-208	ENST00000600660	NUTM2A	Q8IVF1	878 aa	Predicted RBP	28.79	■■■□□ 2.2
PHLDB3-208	ENST00000600660	RRBP1	Q9P2E9	1410 aa	Known RBP	28.78	■■■□□ 2.2
PHLDB3-208	ENST00000600660	DDX17	Q92841	729 aa	Known RBP	28.78	■■■□□ 2.2
PHLDB3-208	ENST00000600660	NHSL1	Q5SYE7	1610 aa		28.78	■■■□□ 2.2
PHLDB3-208	ENST00000600660	SETD5	Q9C0A6	1442 aa		28.77	■■■□□ 2.2
PHLDB3-208	ENST00000600660	ADGRL3	Q9HAR2	1447 aa		28.77	■■■□□ 2.2
PHLDB3-208	ENST00000600660	TRIM52	Q96A61	297 aa		28.76	■■■□□ 2.19
PHLDB3-208	ENST00000600660	NALCN	Q8IZF0	1738 aa		28.76	■■■□□ 2.19
PHLDB3-208	ENST00000600660	KIF1B	O60333	1816 aa		28.75	■■■□□ 2.19
PHLDB3-208	ENST00000600660	UPF1	Q92900	1129 aa	Known RBP eCLIP	28.69	■■■□□ 2.18
PHLDB3-208	ENST00000600660	AFF2	P51816	1311 aa		28.69	■■■□□ 2.18
PHLDB3-208	ENST00000600660	LRRC59	Q96AG4	307 aa	Known RBP	28.68	■■■□□ 2.18
PHLDB3-208	ENST00000600660	RXRB	P28702	533 aa		28.67	■■■□□ 2.18
PHLDB3-208	ENST00000600660	PNPLA6	Q8IY17	1366 aa		28.66	■■■□□ 2.18
PHLDB3-208	ENST00000600660	ROBO2	Q9HCK4	1378 aa		28.66	■■■□□ 2.18
PHLDB3-208	ENST00000600660	C1orf167	Q5SNV9	1468 aa		28.66	■■■□□ 2.18
PHLDB3-208	ENST00000600660	PTCH1	Q13635	1447 aa		28.63	■■■□□ 2.17
PHLDB3-208	ENST00000600660	VGF	O15240	615 aa	Predicted RBP	28.62	■■■□□ 2.17
PHLDB3-208	ENST00000600660	HFM1	A2PYH4	1435 aa		28.61	■■■□□ 2.17
PHLDB3-208	ENST00000600660	C8orf37	Q96NL8	207 aa		28.61	■■■□□ 2.17
PHLDB3-208	ENST00000600660	ORAI2	Q96SN7	254 aa		28.61	■■■□□ 2.17
PHLDB3-208	ENST00000600660	SLC4A1AP	Q9BWU0	796 aa	Known RBP	28.59	■■■□□ 2.17
PHLDB3-208	ENST00000600660	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.59	■■■□□ 2.17
PHLDB3-208	ENST00000600660	PPL	O60437	1756 aa		28.58	■■■□□ 2.17
PHLDB3-208	ENST00000600660	LAMC1	P11047	1609 aa		28.58	■■■□□ 2.17
PHLDB3-208	ENST00000600660	RPGRIP1L	Q68CZ1	1315 aa		28.57	■■■□□ 2.16
PHLDB3-208	ENST00000600660	FOXD1	Q16676	465 aa		28.56	■■■□□ 2.16
PHLDB3-208	ENST00000600660	PRAG1	Q86YV5	1406 aa		28.56	■■■□□ 2.16
PHLDB3-208	ENST00000600660	QTRT2	Q9H974	415 aa	Known RBP	28.55	■■■□□ 2.16
PHLDB3-208	ENST00000600660	SOS2	Q07890	1332 aa	Predicted RBP	28.54	■■■□□ 2.16
PHLDB3-208	ENST00000600660	ADAMTS2	O95450	1211 aa		28.54	■■■□□ 2.16
PHLDB3-208	ENST00000600660	RGS12	O14924	1447 aa		28.52	■■■□□ 2.16
PHLDB3-208	ENST00000600660	RBM6	P78332	1123 aa	Known RBP	28.49	■■■□□ 2.15
PHLDB3-208	ENST00000600660	NGLY1	Q96IV0	654 aa		28.49	■■■□□ 2.15
PHLDB3-208	ENST00000600660	ADGRF5	Q8IZF2	1346 aa		28.48	■■■□□ 2.15
PHLDB3-208	ENST00000600660	RGL3	Q3MIN7	710 aa		28.42	■■■□□ 2.14

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms