RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
RPS28-203ENST00000600659 CPS1P31327 1500 aa23.54■■□□□ 1.36
RPS28-203ENST00000600659 FOXD1Q16676 465 aa23.54■■□□□ 1.36
RPS28-203ENST00000600659 NEXMIFQ5QGS0 1516 aa23.53■■□□□ 1.36
RPS28-203ENST00000600659 PLEKHG1Q9ULL1 1385 aa23.52■■□□□ 1.36
RPS28-203ENST00000600659 NRXN3Q9Y4C0 1643 aa23.52■■□□□ 1.36
RPS28-203ENST00000600659 CHGAP10645 457 aaKnown RBP23.52■■□□□ 1.36
RPS28-203ENST00000600659 FBXO41Q8TF61 875 aa23.52■■□□□ 1.36
RPS28-203ENST00000600659 XIRP1Q702N8 1843 aaKnown RBP23.49■■□□□ 1.35
RPS28-203ENST00000600659 NWD1Q149M9 1564 aa23.49■■□□□ 1.35
RPS28-203ENST00000600659 ACIN1Q9UKV3 1341 aaKnown RBP23.48■■□□□ 1.35
RPS28-203ENST00000600659 ADAMTS13Q76LX8 1427 aa23.48■■□□□ 1.35
RPS28-203ENST00000600659 LRRC7Q96NW7 1537 aa23.46■■□□□ 1.35
RPS28-203ENST00000600659 PPLO60437 1756 aa23.46■■□□□ 1.35
RPS28-203ENST00000600659 CHD2O14647 1828 aaKnown RBP23.46■■□□□ 1.35
RPS28-203ENST00000600659 SETBP1Q9Y6X0 1596 aa23.46■■□□□ 1.35
RPS28-203ENST00000600659 HRCP23327 699 aa23.45■■□□□ 1.34
RPS28-203ENST00000600659 NUTM2DQ5VT03 806 aaPredicted RBP23.45■■□□□ 1.34
RPS28-203ENST00000600659 DIP2AQ14689 1571 aa23.45■■□□□ 1.34
RPS28-203ENST00000600659 SLC26A8Q96RN1 970 aa23.44■■□□□ 1.34
RPS28-203ENST00000600659 IFT172Q9UG01 1749 aa23.44■■□□□ 1.34
RPS28-203ENST00000600659 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.43■■□□□ 1.34
RPS28-203ENST00000600659 ALKQ9UM73 1620 aa23.43■■□□□ 1.34
RPS28-203ENST00000600659 SPATA31E1Q6ZUB1 1445 aa23.43■■□□□ 1.34
RPS28-203ENST00000600659 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
RPS28-203ENST00000600659 SETD1AO15047 1707 aaKnown RBP23.41■■□□□ 1.34
RPS28-203ENST00000600659 PPP1R15AO75807 674 aaPredicted RBP23.4■■□□□ 1.34
RPS28-203ENST00000600659 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
RPS28-203ENST00000600659 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.34
RPS28-203ENST00000600659 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
RPS28-203ENST00000600659 NKTRP30414 1462 aaKnown RBP23.36■■□□□ 1.33
RPS28-203ENST00000600659 TBX22Q9Y458 520 aa23.36■■□□□ 1.33
RPS28-203ENST00000600659 ANKRD30BQ9BXX2 1392 aa23.36■■□□□ 1.33
RPS28-203ENST00000600659 KCNA6P17658 529 aa23.35■■□□□ 1.33
RPS28-203ENST00000600659 XRN1Q8IZH2 1706 aaKnown RBP23.34■■□□□ 1.33
RPS28-203ENST00000600659 PTPRUQ92729 1446 aa23.34■■□□□ 1.33
RPS28-203ENST00000600659 PIK3R4Q99570 1358 aa23.32■■□□□ 1.32
RPS28-203ENST00000600659 RPGRIP1LQ68CZ1 1315 aa23.31■■□□□ 1.32
RPS28-203ENST00000600659 BCANQ96GW7 911 aa23.31■■□□□ 1.32
RPS28-203ENST00000600659 METP08581 1390 aa23.28■■□□□ 1.32
RPS28-203ENST00000600659 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
RPS28-203ENST00000600659 UBAP1LF5GYI3 381 aa23.25■■□□□ 1.31
RPS28-203ENST00000600659 RGL3Q3MIN7 710 aa23.24■■□□□ 1.31
RPS28-203ENST00000600659 ADGRF5Q8IZF2 1346 aa23.23■■□□□ 1.31
RPS28-203ENST00000600659 NRXN1Q9ULB1 1477 aa23.23■■□□□ 1.31
RPS28-203ENST00000600659 VGFO15240 615 aaPredicted RBP23.23■■□□□ 1.31
RPS28-203ENST00000600659 ASXL1Q8IXJ9 1541 aa23.23■■□□□ 1.31
RPS28-203ENST00000600659 PIK3C2GO75747 1445 aa23.22■■□□□ 1.31
RPS28-203ENST00000600659 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
RPS28-203ENST00000600659 MYOM2P54296 1465 aa23.22■■□□□ 1.31
RPS28-203ENST00000600659 PROSER2Q86WR7 435 aaPredicted RBP23.2■■□□□ 1.3
RPS28-203ENST00000600659 PRAG1Q86YV5 1406 aa23.19■■□□□ 1.3
RPS28-203ENST00000600659 AMOTL2Q9Y2J4 779 aa23.19■■□□□ 1.3
RPS28-203ENST00000600659 TRIM26Q12899 539 aaPredicted RBP23.18■■□□□ 1.3
RPS28-203ENST00000600659 TOM1O60784 492 aa23.17■■□□□ 1.3
RPS28-203ENST00000600659 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
RPS28-203ENST00000600659 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.17■■□□□ 1.3
RPS28-203ENST00000600659 NALCNQ8IZF0 1738 aa23.14■■□□□ 1.3
RPS28-203ENST00000600659 PTCH1Q13635 1447 aa23.13■■□□□ 1.29
RPS28-203ENST00000600659 KNDC1Q76NI1 1749 aa23.13■■□□□ 1.29
RPS28-203ENST00000600659 DHX57Q6P158 1386 aaKnown RBP23.13■■□□□ 1.29
RPS28-203ENST00000600659 LAMC1P11047 1609 aa23.13■■□□□ 1.29
RPS28-203ENST00000600659 PIP4K2BP78356 416 aa23.1■■□□□ 1.29
RPS28-203ENST00000600659 ROBO2Q9HCK4 1378 aa23.1■■□□□ 1.29
RPS28-203ENST00000600659 MSH6P52701 1360 aa23.09■■□□□ 1.29
RPS28-203ENST00000600659 ROBO1Q9Y6N7 1651 aa23.09■■□□□ 1.29
RPS28-203ENST00000600659 TECPR2O15040 1411 aa23.08■■□□□ 1.29
RPS28-203ENST00000600659 ADGRB1O14514 1584 aa23.06■■□□□ 1.28
RPS28-203ENST00000600659 ADGRL3Q9HAR2 1447 aa23.06■■□□□ 1.28
RPS28-203ENST00000600659 DCCP43146 1447 aa23.05■■□□□ 1.28
RPS28-203ENST00000600659 FAM135BQ49AJ0 1406 aa23.05■■□□□ 1.28
RPS28-203ENST00000600659 SCAF1Q9H7N4 1312 aaKnown RBP23.05■■□□□ 1.28
RPS28-203ENST00000600659 C14orf93Q9H972 538 aaKnown RBP23.05■■□□□ 1.28
RPS28-203ENST00000600659 LRPPRCP42704 1394 aaKnown RBP23.04■■□□□ 1.28
RPS28-203ENST00000600659 HSPA1LP34931 641 aa23.03■■□□□ 1.28
RPS28-203ENST00000600659 CFAP70Q5T0N1 1121 aa23.02■■□□□ 1.28
RPS28-203ENST00000600659 TMEM132EQ6IEE7 984 aa23.02■■□□□ 1.28
RPS28-203ENST00000600659 C19orf44Q9H6X5 657 aa23.02■■□□□ 1.28
RPS28-203ENST00000600659 YTHDC2Q9H6S0 1430 aaKnown RBP23.01■■□□□ 1.27
RPS28-203ENST00000600659 ABCC11Q96J66 1382 aa23.01■■□□□ 1.27
RPS28-203ENST00000600659 DCAF11Q8TEB1 546 aa23■■□□□ 1.27
RPS28-203ENST00000600659 MST1RQ04912 1400 aa22.99■■□□□ 1.27
RPS28-203ENST00000600659 KIAA1210Q9ULL0 1709 aa22.97■■□□□ 1.27
RPS28-203ENST00000600659 C14orf37Q86TY3 774 aa22.97■■□□□ 1.27
RPS28-203ENST00000600659 SIN3AQ96ST3 1273 aa22.97■■□□□ 1.27
RPS28-203ENST00000600659 SLAIN2Q9P270 581 aa22.97■■□□□ 1.27
RPS28-203ENST00000600659 PLEKHH1Q9ULM0 1364 aa22.97■■□□□ 1.27
RPS28-203ENST00000600659 STAC3Q96MF2 364 aa22.96■■□□□ 1.27
RPS28-203ENST00000600659 KDM2AQ9Y2K7 1162 aa22.96■■□□□ 1.27
RPS28-203ENST00000600659 CDC42BPGQ6DT37 1551 aa22.96■■□□□ 1.27
RPS28-203ENST00000600659 DLC1Q96QB1 1528 aa22.95■■□□□ 1.26
RPS28-203ENST00000600659 CADPS2Q86UW7 1296 aa22.95■■□□□ 1.26
RPS28-203ENST00000600659 STK26Q9P289 416 aa22.93■■□□□ 1.26
RPS28-203ENST00000600659 PHLPP1O60346 1717 aa22.92■■□□□ 1.26
RPS28-203ENST00000600659 COL16A1Q07092 1604 aaPredicted RBP22.92■■□□□ 1.26
RPS28-203ENST00000600659 AHDC1Q5TGY3 1603 aaPredicted RBP22.92■■□□□ 1.26
RPS28-203ENST00000600659 ARHGEF28Q8N1W1 1705 aaKnown RBP22.92■■□□□ 1.26
RPS28-203ENST00000600659 ATF3P18847 181 aa22.91■■□□□ 1.26
RPS28-203ENST00000600659 WAPLQ7Z5K2 1190 aa22.91■■□□□ 1.26
RPS28-203ENST00000600659 NHSL1Q5SYE7 1610 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms