RNA–Protein interactions for RNA: ENST00000600139.1

C19orf54-210, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-210ENST00000600139 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
C19orf54-210ENST00000600139 SLC26A8Q96RN1 970 aa13.74□□□□□ -0.21
C19orf54-210ENST00000600139 IQGAP3Q86VI3 1631 aa13.74□□□□□ -0.21
C19orf54-210ENST00000600139 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
C19orf54-210ENST00000600139 SENP3Q9H4L4 574 aaPredicted RBP13.73□□□□□ -0.21
C19orf54-210ENST00000600139 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
C19orf54-210ENST00000600139 PLEKHG1Q9ULL1 1385 aa13.71□□□□□ -0.21
C19orf54-210ENST00000600139 EID1Q9Y6B2 187 aa13.71□□□□□ -0.21
C19orf54-210ENST00000600139 RIMS2Q9UQ26 1411 aa13.71□□□□□ -0.22
C19orf54-210ENST00000600139 SLC52A1Q9NWF4 448 aa13.7□□□□□ -0.22
C19orf54-210ENST00000600139 ROCK1Q13464 1354 aa13.7□□□□□ -0.22
C19orf54-210ENST00000600139 COL16A1Q07092 1604 aaPredicted RBP13.69□□□□□ -0.22
C19orf54-210ENST00000600139 FAM50AQ14320 339 aaKnown RBP13.68□□□□□ -0.22
C19orf54-210ENST00000600139 PTPRUQ92729 1446 aa13.67□□□□□ -0.22
C19orf54-210ENST00000600139 APLP2Q06481 763 aa13.67□□□□□ -0.22
C19orf54-210ENST00000600139 XRN1Q8IZH2 1706 aaKnown RBP13.66□□□□□ -0.22
C19orf54-210ENST00000600139 POTEAQ6S8J7 498 aa13.65□□□□□ -0.22
C19orf54-210ENST00000600139 DIP2AQ14689 1571 aa13.65□□□□□ -0.22
C19orf54-210ENST00000600139 LRP6O75581 1613 aa13.64□□□□□ -0.23
C19orf54-210ENST00000600139 PHLPP1O60346 1717 aa13.64□□□□□ -0.23
C19orf54-210ENST00000600139 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.64□□□□□ -0.23
C19orf54-210ENST00000600139 PROSER2Q86WR7 435 aaPredicted RBP13.64□□□□□ -0.23
C19orf54-210ENST00000600139 STAG3Q9UJ98 1225 aa13.64□□□□□ -0.23
C19orf54-210ENST00000600139 SETBP1Q9Y6X0 1596 aa13.62□□□□□ -0.23
C19orf54-210ENST00000600139 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
C19orf54-210ENST00000600139 SPHKAPQ2M3C7 1700 aa13.62□□□□□ -0.23
C19orf54-210ENST00000600139 AHDC1Q5TGY3 1603 aaPredicted RBP13.62□□□□□ -0.23
C19orf54-210ENST00000600139 PHF23Q9BUL5 403 aaPredicted RBP13.62□□□□□ -0.23
C19orf54-210ENST00000600139 TBX22Q9Y458 520 aa13.62□□□□□ -0.23
C19orf54-210ENST00000600139 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
C19orf54-210ENST00000600139 NUTM2DQ5VT03 806 aaPredicted RBP13.6□□□□□ -0.23
C19orf54-210ENST00000600139 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
C19orf54-210ENST00000600139 MSH6P52701 1360 aa13.59□□□□□ -0.23
C19orf54-210ENST00000600139 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
C19orf54-210ENST00000600139 PIK3R4Q99570 1358 aa13.58□□□□□ -0.23
C19orf54-210ENST00000600139 SHPRHQ149N8 1683 aa13.58□□□□□ -0.24
C19orf54-210ENST00000600139 TRPM2O94759 1503 aa13.58□□□□□ -0.24
C19orf54-210ENST00000600139 NEXMIFQ5QGS0 1516 aa13.58□□□□□ -0.24
C19orf54-210ENST00000600139 NUP155O75694 1391 aa13.58□□□□□ -0.24
C19orf54-210ENST00000600139 METP08581 1390 aa13.56□□□□□ -0.24
C19orf54-210ENST00000600139 JCADQ9P266 1359 aa13.56□□□□□ -0.24
C19orf54-210ENST00000600139 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
C19orf54-210ENST00000600139 RRBP1Q9P2E9 1410 aaKnown RBP13.56□□□□□ -0.24
C19orf54-210ENST00000600139 NHSL1Q5SYE7 1610 aa13.55□□□□□ -0.24
C19orf54-210ENST00000600139 NAIPQ13075 1403 aa13.55□□□□□ -0.24
C19orf54-210ENST00000600139 MST1RQ04912 1400 aa13.54□□□□□ -0.24
C19orf54-210ENST00000600139 ASXL1Q8IXJ9 1541 aa13.54□□□□□ -0.24
C19orf54-210ENST00000600139 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
C19orf54-210ENST00000600139 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
C19orf54-210ENST00000600139 SRCAPQ6ZRS2 3230 aa13.53□□□□□ -0.24
C19orf54-210ENST00000600139 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.52□□□□□ -0.25
C19orf54-210ENST00000600139 DCCP43146 1447 aa13.52□□□□□ -0.25
C19orf54-210ENST00000600139 CHGAP10645 457 aaKnown RBP13.51□□□□□ -0.25
C19orf54-210ENST00000600139 BRINP3Q76B58 766 aa13.51□□□□□ -0.25
C19orf54-210ENST00000600139 AMOTL2Q9Y2J4 779 aa13.51□□□□□ -0.25
C19orf54-210ENST00000600139 LAMC1P11047 1609 aa13.5□□□□□ -0.25
C19orf54-210ENST00000600139 PRAG1Q86YV5 1406 aa13.5□□□□□ -0.25
C19orf54-210ENST00000600139 BCANQ96GW7 911 aa13.5□□□□□ -0.25
C19orf54-210ENST00000600139 C19orf44Q9H6X5 657 aa13.5□□□□□ -0.25
C19orf54-210ENST00000600139 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
C19orf54-210ENST00000600139 ITGAEP38570 1179 aa13.49□□□□□ -0.25
C19orf54-210ENST00000600139 SETD5Q9C0A6 1442 aa13.48□□□□□ -0.25
C19orf54-210ENST00000600139 EP400Q96L91 3159 aa13.46□□□□□ -0.25
C19orf54-210ENST00000600139 SPATA31A6Q5VVP1 1343 aa13.46□□□□□ -0.25
C19orf54-210ENST00000600139 HDGFP51858 240 aaKnown RBP13.46□□□□□ -0.25
C19orf54-210ENST00000600139 CADPS2Q86UW7 1296 aa13.46□□□□□ -0.25
C19orf54-210ENST00000600139 KIF1BO60333 1816 aa13.46□□□□□ -0.26
C19orf54-210ENST00000600139 PPLO60437 1756 aa13.45□□□□□ -0.26
C19orf54-210ENST00000600139 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
C19orf54-210ENST00000600139 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
C19orf54-210ENST00000600139 ROBO2Q9HCK4 1378 aa13.45□□□□□ -0.26
C19orf54-210ENST00000600139 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
C19orf54-210ENST00000600139 PNPLA6Q8IY17 1366 aa13.43□□□□□ -0.26
C19orf54-210ENST00000600139 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
C19orf54-210ENST00000600139 ATF3P18847 181 aa13.42□□□□□ -0.26
C19orf54-210ENST00000600139 C14orf37Q86TY3 774 aa13.41□□□□□ -0.26
C19orf54-210ENST00000600139 IFT172Q9UG01 1749 aa13.41□□□□□ -0.26
C19orf54-210ENST00000600139 CDK12Q9NYV4 1490 aaPredicted RBP13.4□□□□□ -0.26
C19orf54-210ENST00000600139 SPATA31E1Q6ZUB1 1445 aa13.39□□□□□ -0.27
C19orf54-210ENST00000600139 COL22A1Q8NFW1 1626 aaPredicted RBP13.38□□□□□ -0.27
C19orf54-210ENST00000600139 RGS12O14924 1447 aa13.38□□□□□ -0.27
C19orf54-210ENST00000600139 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
C19orf54-210ENST00000600139 UPF1Q92900 1129 aaKnown RBP eCLIP13.37□□□□□ -0.27
C19orf54-210ENST00000600139 AFF2P51816 1311 aa13.37□□□□□ -0.27
C19orf54-210ENST00000600139 CDC42BPGQ6DT37 1551 aa13.37□□□□□ -0.27
C19orf54-210ENST00000600139 SOS2Q07890 1332 aaPredicted RBP13.36□□□□□ -0.27
C19orf54-210ENST00000600139 TECPR2O15040 1411 aa13.35□□□□□ -0.27
C19orf54-210ENST00000600139 PXDNQ92626 1479 aa13.35□□□□□ -0.27
C19orf54-210ENST00000600139 NUTM2BA6NNL0 878 aaPredicted RBP13.34□□□□□ -0.27
C19orf54-210ENST00000600139 NUTM2EB1AL46 878 aaPredicted RBP13.34□□□□□ -0.27
C19orf54-210ENST00000600139 FOXD1Q16676 465 aa13.34□□□□□ -0.27
C19orf54-210ENST00000600139 ZNF772Q68DY9 489 aaPredicted RBP13.34□□□□□ -0.27
C19orf54-210ENST00000600139 NUTM2AQ8IVF1 878 aaPredicted RBP13.34□□□□□ -0.27
C19orf54-210ENST00000600139 ORAI2Q96SN7 254 aa13.34□□□□□ -0.27
C19orf54-210ENST00000600139 MYOM2P54296 1465 aa13.34□□□□□ -0.27
C19orf54-210ENST00000600139 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.27
C19orf54-210ENST00000600139 TRIM52Q96A61 297 aa13.33□□□□□ -0.28
C19orf54-210ENST00000600139 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
C19orf54-210ENST00000600139 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
C19orf54-210ENST00000600139 MEX3CQ5U5Q3 659 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 539 ms