RNA–Protein interactions for RNA: ENST00000598969.5

COPE-208, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 5

Gene COPE, Length 1,770 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-208ENST00000598969 PRAG1Q86YV5 1406 aa29.89■■■□□ 2.38
COPE-208ENST00000598969 MYOM2P54296 1465 aa29.89■■■□□ 2.38
COPE-208ENST00000598969 SETD1BQ9UPS6 1966 aaKnown RBP29.88■■■□□ 2.37
COPE-208ENST00000598969 CEP170BQ9Y4F5 1589 aaPredicted RBP29.85■■■□□ 2.37
COPE-208ENST00000598969 ADGRF5Q8IZF2 1346 aa29.85■■■□□ 2.37
COPE-208ENST00000598969 NRXN1Q9ULB1 1477 aa29.83■■■□□ 2.37
COPE-208ENST00000598969 ZNF142P52746 1687 aaPredicted RBP29.82■■■□□ 2.36
COPE-208ENST00000598969 ZFYVE9O95405 1425 aa29.81■■■□□ 2.36
COPE-208ENST00000598969 RIMS2Q9UQ26 1411 aa29.81■■■□□ 2.36
COPE-208ENST00000598969 NUTM2DQ5VT03 806 aaPredicted RBP29.81■■■□□ 2.36
COPE-208ENST00000598969 TMEM2Q9UHN6 1383 aa29.79■■■□□ 2.36
COPE-208ENST00000598969 VGFO15240 615 aaPredicted RBP29.79■■■□□ 2.36
COPE-208ENST00000598969 RALGAPBQ86X10 1494 aa29.78■■■□□ 2.36
COPE-208ENST00000598969 TRPM1Q7Z4N2 1603 aa29.77■■■□□ 2.36
COPE-208ENST00000598969 PIK3C2GO75747 1445 aa29.76■■■□□ 2.35
COPE-208ENST00000598969 ARHGAP23Q9P227 1491 aa29.75■■■□□ 2.35
COPE-208ENST00000598969 THEMISQ8N1K5 641 aaPredicted RBP29.75■■■□□ 2.35
COPE-208ENST00000598969 SLIT1O75093 1534 aa29.75■■■□□ 2.35
COPE-208ENST00000598969 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
COPE-208ENST00000598969 NBPF1Q3BBV0 1214 aa29.7■■■□□ 2.35
COPE-208ENST00000598969 KIAA1210Q9ULL0 1709 aa29.69■■■□□ 2.34
COPE-208ENST00000598969 LTKP29376 864 aa29.68■■■□□ 2.34
COPE-208ENST00000598969 HDGFP51858 240 aaKnown RBP29.68■■■□□ 2.34
COPE-208ENST00000598969 CFAP70Q5T0N1 1121 aa29.68■■■□□ 2.34
COPE-208ENST00000598969 ROCK2O75116 1388 aaKnown RBP29.67■■■□□ 2.34
COPE-208ENST00000598969 GPRASP1Q5JY77 1395 aa29.67■■■□□ 2.34
COPE-208ENST00000598969 ZNF316A6NFI3 1004 aaPredicted RBP29.67■■■□□ 2.34
COPE-208ENST00000598969 C14orf93Q9H972 538 aaKnown RBP29.66■■■□□ 2.34
COPE-208ENST00000598969 TXNDC2Q86VQ3 553 aa29.64■■■□□ 2.34
COPE-208ENST00000598969 CARD11Q9BXL7 1154 aa29.62■■■□□ 2.33
COPE-208ENST00000598969 SENP3Q9H4L4 574 aaPredicted RBP29.62■■■□□ 2.33
COPE-208ENST00000598969 EID1Q9Y6B2 187 aa29.62■■■□□ 2.33
COPE-208ENST00000598969 LAMC1P11047 1609 aa29.61■■■□□ 2.33
COPE-208ENST00000598969 NRXN3Q9Y4C0 1643 aa29.61■■■□□ 2.33
COPE-208ENST00000598969 PLEKHG1Q9ULL1 1385 aa29.6■■■□□ 2.33
COPE-208ENST00000598969 SCAF11Q99590 1463 aaKnown RBP29.6■■■□□ 2.33
COPE-208ENST00000598969 SETBP1Q9Y6X0 1596 aa29.59■■■□□ 2.33
COPE-208ENST00000598969 ALKQ9UM73 1620 aa29.58■■■□□ 2.33
COPE-208ENST00000598969 ADGRB1O14514 1584 aa29.57■■■□□ 2.32
COPE-208ENST00000598969 IQGAP1P46940 1657 aa29.56■■■□□ 2.32
COPE-208ENST00000598969 LMTK3Q96Q04 1460 aa29.56■■■□□ 2.32
COPE-208ENST00000598969 EIF4G2P78344 907 aaKnown RBP eCLIP29.54■■■□□ 2.32
COPE-208ENST00000598969 ANKLE2Q86XL3 938 aa29.54■■■□□ 2.32
COPE-208ENST00000598969 ASXL1Q8IXJ9 1541 aa29.54■■■□□ 2.32
COPE-208ENST00000598969 SETD1AO15047 1707 aaKnown RBP29.54■■■□□ 2.32
COPE-208ENST00000598969 USP47Q96K76 1375 aa29.54■■■□□ 2.32
COPE-208ENST00000598969 HSPA5P11021 654 aaKnown RBP29.54■■■□□ 2.32
COPE-208ENST00000598969 ADAMTS13Q76LX8 1427 aa29.53■■■□□ 2.32
COPE-208ENST00000598969 TMEM132EQ6IEE7 984 aa29.52■■■□□ 2.32
COPE-208ENST00000598969 HIRIP3Q9BW71 556 aaPredicted RBP29.5■■■□□ 2.31
COPE-208ENST00000598969 MED14O60244 1454 aa29.49■■■□□ 2.31
COPE-208ENST00000598969 BCANQ96GW7 911 aa29.49■■■□□ 2.31
COPE-208ENST00000598969 HSPA2P54652 639 aa29.48■■■□□ 2.31
COPE-208ENST00000598969 POLR1AO95602 1720 aaPredicted RBP29.46■■■□□ 2.31
COPE-208ENST00000598969 METP08581 1390 aa29.45■■■□□ 2.31
COPE-208ENST00000598969 NCKAP5LQ9HCH0 1330 aa29.45■■■□□ 2.31
COPE-208ENST00000598969 SLC26A8Q96RN1 970 aa29.44■■■□□ 2.3
COPE-208ENST00000598969 ST20-MTHFSA0A0A6YYL1 179 aa29.42■■■□□ 2.3
COPE-208ENST00000598969 TBX22Q9Y458 520 aa29.42■■■□□ 2.3
COPE-208ENST00000598969 NPHP4O75161 1426 aaPredicted RBP29.42■■■□□ 2.3
COPE-208ENST00000598969 YTHDC2Q9H6S0 1430 aaKnown RBP29.42■■■□□ 2.3
COPE-208ENST00000598969 DIP2AQ14689 1571 aa29.41■■■□□ 2.3
COPE-208ENST00000598969 TRAK1Q9UPV9 953 aa29.4■■■□□ 2.3
COPE-208ENST00000598969 LRPPRCP42704 1394 aaKnown RBP29.37■■■□□ 2.29
COPE-208ENST00000598969 STK26Q9P289 416 aa29.37■■■□□ 2.29
COPE-208ENST00000598969 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
COPE-208ENST00000598969 ARHGEF28Q8N1W1 1705 aaKnown RBP29.34■■■□□ 2.29
COPE-208ENST00000598969 ABCC11Q96J66 1382 aa29.33■■■□□ 2.29
COPE-208ENST00000598969 PTPRUQ92729 1446 aa29.33■■■□□ 2.29
COPE-208ENST00000598969 DIEXFQ68CQ4 756 aaKnown RBP29.33■■■□□ 2.29
COPE-208ENST00000598969 TESK2Q96S53 571 aa29.32■■■□□ 2.28
COPE-208ENST00000598969 STRCQ7RTU9 1775 aa29.32■■■□□ 2.28
COPE-208ENST00000598969 DLC1Q96QB1 1528 aa29.31■■■□□ 2.28
COPE-208ENST00000598969 TECPR2O15040 1411 aa29.29■■■□□ 2.28
COPE-208ENST00000598969 KNDC1Q76NI1 1749 aa29.29■■■□□ 2.28
COPE-208ENST00000598969 PIK3R4Q99570 1358 aa29.29■■■□□ 2.28
COPE-208ENST00000598969 CENPJQ9HC77 1338 aaPredicted RBP29.29■■■□□ 2.28
COPE-208ENST00000598969 C11orf95C9JLR9 678 aaPredicted RBP29.29■■■□□ 2.28
COPE-208ENST00000598969 CPS1P31327 1500 aa29.26■■■□□ 2.27
COPE-208ENST00000598969 PRAM1Q96QH2 718 aa29.24■■■□□ 2.27
COPE-208ENST00000598969 AMOTL2Q9Y2J4 779 aa29.24■■■□□ 2.27
COPE-208ENST00000598969 XRN1Q8IZH2 1706 aaKnown RBP29.24■■■□□ 2.27
COPE-208ENST00000598969 QRICH2Q9H0J4 1663 aa29.23■■■□□ 2.27
COPE-208ENST00000598969 SIRT1Q96EB6 747 aa29.23■■■□□ 2.27
COPE-208ENST00000598969 SBNO2Q9Y2G9 1366 aa29.23■■■□□ 2.27
COPE-208ENST00000598969 CHD2O14647 1828 aaKnown RBP29.22■■■□□ 2.27
COPE-208ENST00000598969 ROBO2Q9HCK4 1378 aa29.22■■■□□ 2.27
COPE-208ENST00000598969 PLEKHH1Q9ULM0 1364 aa29.21■■■□□ 2.27
COPE-208ENST00000598969 FAM135BQ49AJ0 1406 aa29.21■■■□□ 2.27
COPE-208ENST00000598969 WASHC2AQ641Q2 1341 aa29.21■■■□□ 2.27
COPE-208ENST00000598969 WAPLQ7Z5K2 1190 aa29.21■■■□□ 2.27
COPE-208ENST00000598969 DISP3Q9P2K9 1392 aa29.19■■■□□ 2.26
COPE-208ENST00000598969 POGKQ9P215 609 aa29.19■■■□□ 2.26
COPE-208ENST00000598969 KIF7Q2M1P5 1343 aa29.19■■■□□ 2.26
COPE-208ENST00000598969 CCDC7Q96M83 1385 aa29.19■■■□□ 2.26
COPE-208ENST00000598969 SAFB2Q14151 953 aaKnown RBP eCLIP29.18■■■□□ 2.26
COPE-208ENST00000598969 PTCH1Q13635 1447 aa29.18■■■□□ 2.26
COPE-208ENST00000598969 KCNA6P17658 529 aa29.17■■■□□ 2.26
COPE-208ENST00000598969 TMF1P82094 1093 aa29.16■■■□□ 2.26
COPE-208ENST00000598969 NWD1Q149M9 1564 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms