RNA–Protein interactions for RNA: ENST00000598812.5

ARHGEF1-217, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARHGEF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-217ENST00000598812 CHGAP10645 457 aaKnown RBP29.89■■■□□ 2.38
ARHGEF1-217ENST00000598812 MYO5BQ9ULV0 1848 aa29.89■■■□□ 2.38
ARHGEF1-217ENST00000598812 TMEM131LA2VDJ0 1609 aa29.89■■■□□ 2.37
ARHGEF1-217ENST00000598812 HDGFP51858 240 aaKnown RBP29.88■■■□□ 2.37
ARHGEF1-217ENST00000598812 BCANQ96GW7 911 aa29.88■■■□□ 2.37
ARHGEF1-217ENST00000598812 PPP1R15AO75807 674 aaPredicted RBP29.86■■■□□ 2.37
ARHGEF1-217ENST00000598812 RIMS2Q9UQ26 1411 aa29.86■■■□□ 2.37
ARHGEF1-217ENST00000598812 SLC26A8Q96RN1 970 aa29.85■■■□□ 2.37
ARHGEF1-217ENST00000598812 ZFYVE9O95405 1425 aa29.85■■■□□ 2.37
ARHGEF1-217ENST00000598812 PHF23Q9BUL5 403 aaPredicted RBP29.84■■■□□ 2.37
ARHGEF1-217ENST00000598812 HFM1A2PYH4 1435 aa29.82■■■□□ 2.36
ARHGEF1-217ENST00000598812 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.8■■■□□ 2.36
ARHGEF1-217ENST00000598812 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
ARHGEF1-217ENST00000598812 PLEKHG1Q9ULL1 1385 aa29.79■■■□□ 2.36
ARHGEF1-217ENST00000598812 KCNA6P17658 529 aa29.78■■■□□ 2.36
ARHGEF1-217ENST00000598812 SENP3Q9H4L4 574 aaPredicted RBP29.78■■■□□ 2.36
ARHGEF1-217ENST00000598812 TRIM52Q96A61 297 aa29.76■■■□□ 2.35
ARHGEF1-217ENST00000598812 NUTM2DQ5VT03 806 aaPredicted RBP29.73■■■□□ 2.35
ARHGEF1-217ENST00000598812 XIRP1Q702N8 1843 aaKnown RBP29.71■■■□□ 2.35
ARHGEF1-217ENST00000598812 TMEM94Q12767 1356 aa29.7■■■□□ 2.35
ARHGEF1-217ENST00000598812 NWD1Q149M9 1564 aa29.69■■■□□ 2.34
ARHGEF1-217ENST00000598812 NKTRP30414 1462 aaKnown RBP29.69■■■□□ 2.34
ARHGEF1-217ENST00000598812 PROSER2Q86WR7 435 aaPredicted RBP29.69■■■□□ 2.34
ARHGEF1-217ENST00000598812 TRPM2O94759 1503 aa29.67■■■□□ 2.34
ARHGEF1-217ENST00000598812 TBX22Q9Y458 520 aa29.67■■■□□ 2.34
ARHGEF1-217ENST00000598812 ZNF326Q5BKZ1 582 aaKnown RBP29.66■■■□□ 2.34
ARHGEF1-217ENST00000598812 SLC4A1APQ9BWU0 796 aaKnown RBP29.65■■■□□ 2.34
ARHGEF1-217ENST00000598812 RGS17Q9UGC6 210 aaPredicted RBP29.65■■■□□ 2.34
ARHGEF1-217ENST00000598812 CLTCL1P53675 1640 aa29.63■■■□□ 2.33
ARHGEF1-217ENST00000598812 CHD2O14647 1828 aaKnown RBP29.63■■■□□ 2.33
ARHGEF1-217ENST00000598812 DIP2AQ14689 1571 aa29.63■■■□□ 2.33
ARHGEF1-217ENST00000598812 ADAMTS13Q76LX8 1427 aa29.62■■■□□ 2.33
ARHGEF1-217ENST00000598812 RBM33Q96EV2 1170 aaKnown RBP29.62■■■□□ 2.33
ARHGEF1-217ENST00000598812 KIF1BO60333 1816 aa29.57■■■□□ 2.32
ARHGEF1-217ENST00000598812 PIK3R4Q99570 1358 aa29.57■■■□□ 2.32
ARHGEF1-217ENST00000598812 MSH6P52701 1360 aa29.55■■■□□ 2.32
ARHGEF1-217ENST00000598812 SETBP1Q9Y6X0 1596 aa29.52■■■□□ 2.32
ARHGEF1-217ENST00000598812 NEXMIFQ5QGS0 1516 aa29.51■■■□□ 2.32
ARHGEF1-217ENST00000598812 NRXN3Q9Y4C0 1643 aa29.49■■■□□ 2.31
ARHGEF1-217ENST00000598812 FAM135BQ49AJ0 1406 aa29.49■■■□□ 2.31
ARHGEF1-217ENST00000598812 C14orf37Q86TY3 774 aa29.49■■■□□ 2.31
ARHGEF1-217ENST00000598812 NCOA3Q9Y6Q9 1424 aa29.47■■■□□ 2.31
ARHGEF1-217ENST00000598812 FOXD1Q16676 465 aa29.47■■■□□ 2.31
ARHGEF1-217ENST00000598812 AMOTL2Q9Y2J4 779 aa29.47■■■□□ 2.31
ARHGEF1-217ENST00000598812 ACIN1Q9UKV3 1341 aaKnown RBP29.45■■■□□ 2.31
ARHGEF1-217ENST00000598812 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
ARHGEF1-217ENST00000598812 SETD1AO15047 1707 aaKnown RBP29.44■■■□□ 2.3
ARHGEF1-217ENST00000598812 PTPRUQ92729 1446 aa29.44■■■□□ 2.3
ARHGEF1-217ENST00000598812 SETD5Q9C0A6 1442 aa29.44■■■□□ 2.3
ARHGEF1-217ENST00000598812 ROBO1Q9Y6N7 1651 aa29.42■■■□□ 2.3
ARHGEF1-217ENST00000598812 VGFO15240 615 aaPredicted RBP29.42■■■□□ 2.3
ARHGEF1-217ENST00000598812 SLAIN2Q9P270 581 aa29.42■■■□□ 2.3
ARHGEF1-217ENST00000598812 RPGRIP1LQ68CZ1 1315 aa29.42■■■□□ 2.3
ARHGEF1-217ENST00000598812 CCDC144AA2RUR9 1427 aa29.41■■■□□ 2.3
ARHGEF1-217ENST00000598812 POTEAQ6S8J7 498 aa29.41■■■□□ 2.3
ARHGEF1-217ENST00000598812 METP08581 1390 aa29.39■■■□□ 2.3
ARHGEF1-217ENST00000598812 C19orf44Q9H6X5 657 aa29.39■■■□□ 2.3
ARHGEF1-217ENST00000598812 XRN1Q8IZH2 1706 aaKnown RBP29.39■■■□□ 2.3
ARHGEF1-217ENST00000598812 ATF3P18847 181 aa29.36■■■□□ 2.29
ARHGEF1-217ENST00000598812 CADPS2Q86UW7 1296 aa29.36■■■□□ 2.29
ARHGEF1-217ENST00000598812 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.34■■■□□ 2.29
ARHGEF1-217ENST00000598812 PPLO60437 1756 aa29.34■■■□□ 2.29
ARHGEF1-217ENST00000598812 RAB3GAP2Q9H2M9 1393 aa29.32■■■□□ 2.28
ARHGEF1-217ENST00000598812 RGL3Q3MIN7 710 aa29.29■■■□□ 2.28
ARHGEF1-217ENST00000598812 DCCP43146 1447 aa29.28■■■□□ 2.28
ARHGEF1-217ENST00000598812 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
ARHGEF1-217ENST00000598812 PHLPP1O60346 1717 aa29.25■■■□□ 2.27
ARHGEF1-217ENST00000598812 ANKRD30BQ9BXX2 1392 aa29.23■■■□□ 2.27
ARHGEF1-217ENST00000598812 PTCH1Q13635 1447 aa29.21■■■□□ 2.27
ARHGEF1-217ENST00000598812 ADGRL3Q9HAR2 1447 aa29.21■■■□□ 2.27
ARHGEF1-217ENST00000598812 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.27
ARHGEF1-217ENST00000598812 IFT172Q9UG01 1749 aa29.18■■■□□ 2.26
ARHGEF1-217ENST00000598812 COL16A1Q07092 1604 aaPredicted RBP29.16■■■□□ 2.26
ARHGEF1-217ENST00000598812 ROBO2Q9HCK4 1378 aa29.16■■■□□ 2.26
ARHGEF1-217ENST00000598812 BRINP3Q76B58 766 aa29.16■■■□□ 2.26
ARHGEF1-217ENST00000598812 PRAG1Q86YV5 1406 aa29.16■■■□□ 2.26
ARHGEF1-217ENST00000598812 NALCNQ8IZF0 1738 aa29.16■■■□□ 2.26
ARHGEF1-217ENST00000598812 JCADQ9P266 1359 aa29.15■■■□□ 2.26
ARHGEF1-217ENST00000598812 MST1RQ04912 1400 aa29.15■■■□□ 2.26
ARHGEF1-217ENST00000598812 AHDC1Q5TGY3 1603 aaPredicted RBP29.14■■■□□ 2.26
ARHGEF1-217ENST00000598812 HRCP23327 699 aa29.12■■■□□ 2.25
ARHGEF1-217ENST00000598812 PIK3C2GO75747 1445 aa29.11■■■□□ 2.25
ARHGEF1-217ENST00000598812 ASXL1Q8IXJ9 1541 aa29.1■■■□□ 2.25
ARHGEF1-217ENST00000598812 LRP6O75581 1613 aa29.1■■■□□ 2.25
ARHGEF1-217ENST00000598812 STK26Q9P289 416 aa29.06■■■□□ 2.24
ARHGEF1-217ENST00000598812 LRPPRCP42704 1394 aaKnown RBP29.04■■■□□ 2.24
ARHGEF1-217ENST00000598812 MYOM2P54296 1465 aa29.04■■■□□ 2.24
ARHGEF1-217ENST00000598812 TMEM132EQ6IEE7 984 aa29.03■■■□□ 2.24
ARHGEF1-217ENST00000598812 TECPR2O15040 1411 aa29.03■■■□□ 2.24
ARHGEF1-217ENST00000598812 SPATA31A6Q5VVP1 1343 aa29.02■■■□□ 2.24
ARHGEF1-217ENST00000598812 C1orf167Q5SNV9 1468 aa29.02■■■□□ 2.24
ARHGEF1-217ENST00000598812 NRXN1Q9ULB1 1477 aa29.01■■■□□ 2.23
ARHGEF1-217ENST00000598812 SHPRHQ149N8 1683 aa29.01■■■□□ 2.23
ARHGEF1-217ENST00000598812 NHSL1Q5SYE7 1610 aa29.01■■■□□ 2.23
ARHGEF1-217ENST00000598812 ABCC11Q96J66 1382 aa29.01■■■□□ 2.23
ARHGEF1-217ENST00000598812 UPF1Q92900 1129 aaKnown RBP eCLIP28.99■■■□□ 2.23
ARHGEF1-217ENST00000598812 C14orf93Q9H972 538 aaKnown RBP28.99■■■□□ 2.23
ARHGEF1-217ENST00000598812 KNDC1Q76NI1 1749 aa28.98■■■□□ 2.23
ARHGEF1-217ENST00000598812 YTHDC2Q9H6S0 1430 aaKnown RBP28.98■■■□□ 2.23
ARHGEF1-217ENST00000598812 LAMC1P11047 1609 aa28.98■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms