RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 EID1Q9Y6B2 187 aa16.67■□□□□ 0.26
PDE4C-210ENST00000597297 MYO5BQ9ULV0 1848 aa16.67■□□□□ 0.26
PDE4C-210ENST00000597297 SLIT1O75093 1534 aa16.66■□□□□ 0.26
PDE4C-210ENST00000597297 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
PDE4C-210ENST00000597297 KDM5AP29375 1690 aaKnown RBP16.66■□□□□ 0.26
PDE4C-210ENST00000597297 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
PDE4C-210ENST00000597297 POLR1AO95602 1720 aaPredicted RBP16.65■□□□□ 0.26
PDE4C-210ENST00000597297 ADGRB3O60242 1522 aa16.64■□□□□ 0.25
PDE4C-210ENST00000597297 MED14O60244 1454 aa16.64■□□□□ 0.25
PDE4C-210ENST00000597297 NPHP4O75161 1426 aaPredicted RBP16.64■□□□□ 0.25
PDE4C-210ENST00000597297 NUTM2DQ5VT03 806 aaPredicted RBP16.64■□□□□ 0.25
PDE4C-210ENST00000597297 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
PDE4C-210ENST00000597297 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
PDE4C-210ENST00000597297 SENP3Q9H4L4 574 aaPredicted RBP16.63■□□□□ 0.25
PDE4C-210ENST00000597297 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
PDE4C-210ENST00000597297 SCAF11Q99590 1463 aaKnown RBP16.63■□□□□ 0.25
PDE4C-210ENST00000597297 ZNF335Q9H4Z2 1342 aaPredicted RBP16.62■□□□□ 0.25
PDE4C-210ENST00000597297 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
PDE4C-210ENST00000597297 EIF4G2P78344 907 aaKnown RBP eCLIP16.62■□□□□ 0.25
PDE4C-210ENST00000597297 MIER1Q8N108 512 aa16.61■□□□□ 0.25
PDE4C-210ENST00000597297 HDGFP51858 240 aaKnown RBP16.6■□□□□ 0.25
PDE4C-210ENST00000597297 ZNF326Q5BKZ1 582 aaKnown RBP16.6■□□□□ 0.25
PDE4C-210ENST00000597297 RIMS2Q9UQ26 1411 aa16.6■□□□□ 0.25
PDE4C-210ENST00000597297 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
PDE4C-210ENST00000597297 CERKQ8TCT0 537 aa16.59■□□□□ 0.25
PDE4C-210ENST00000597297 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
PDE4C-210ENST00000597297 TRPM1Q7Z4N2 1603 aa16.58■□□□□ 0.25
PDE4C-210ENST00000597297 IQGAP1P46940 1657 aa16.58■□□□□ 0.25
PDE4C-210ENST00000597297 SPATA31E1Q6ZUB1 1445 aa16.58■□□□□ 0.24
PDE4C-210ENST00000597297 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.58■□□□□ 0.24
PDE4C-210ENST00000597297 SLC26A8Q96RN1 970 aa16.58■□□□□ 0.24
PDE4C-210ENST00000597297 BCANQ96GW7 911 aa16.57■□□□□ 0.24
PDE4C-210ENST00000597297 KIF1BO60333 1816 aa16.57■□□□□ 0.24
PDE4C-210ENST00000597297 LTBP4Q8N2S1 1624 aa16.57■□□□□ 0.24
PDE4C-210ENST00000597297 PRAG1Q86YV5 1406 aa16.57■□□□□ 0.24
PDE4C-210ENST00000597297 KDM2AQ9Y2K7 1162 aa16.55■□□□□ 0.24
PDE4C-210ENST00000597297 DDX10Q13206 875 aaKnown RBP16.55■□□□□ 0.24
PDE4C-210ENST00000597297 RGL3Q3MIN7 710 aa16.55■□□□□ 0.24
PDE4C-210ENST00000597297 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
PDE4C-210ENST00000597297 LAMC1P11047 1609 aa16.53■□□□□ 0.24
PDE4C-210ENST00000597297 USP47Q96K76 1375 aa16.52■□□□□ 0.24
PDE4C-210ENST00000597297 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
PDE4C-210ENST00000597297 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
PDE4C-210ENST00000597297 IFT172Q9UG01 1749 aa16.5■□□□□ 0.23
PDE4C-210ENST00000597297 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
PDE4C-210ENST00000597297 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
PDE4C-210ENST00000597297 NEXMIFQ5QGS0 1516 aa16.49■□□□□ 0.23
PDE4C-210ENST00000597297 VGFO15240 615 aaPredicted RBP16.48■□□□□ 0.23
PDE4C-210ENST00000597297 CARD11Q9BXL7 1154 aa16.48■□□□□ 0.23
PDE4C-210ENST00000597297 ADAMTS13Q76LX8 1427 aa16.48■□□□□ 0.23
PDE4C-210ENST00000597297 ROCK2O75116 1388 aaKnown RBP16.48■□□□□ 0.23
PDE4C-210ENST00000597297 KCNA6P17658 529 aa16.47■□□□□ 0.23
PDE4C-210ENST00000597297 GPRASP1Q5JY77 1395 aa16.47■□□□□ 0.23
PDE4C-210ENST00000597297 CCDC7Q96M83 1385 aa16.47■□□□□ 0.23
PDE4C-210ENST00000597297 ILDR1Q86SU0 546 aaPredicted RBP16.47■□□□□ 0.23
PDE4C-210ENST00000597297 STAC3Q96MF2 364 aa16.46■□□□□ 0.23
PDE4C-210ENST00000597297 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
PDE4C-210ENST00000597297 ADGRF5Q8IZF2 1346 aa16.44■□□□□ 0.22
PDE4C-210ENST00000597297 KIAA1210Q9ULL0 1709 aa16.44■□□□□ 0.22
PDE4C-210ENST00000597297 MYOM2P54296 1465 aa16.44■□□□□ 0.22
PDE4C-210ENST00000597297 C11orf95C9JLR9 678 aaPredicted RBP16.43■□□□□ 0.22
PDE4C-210ENST00000597297 RBM33Q96EV2 1170 aaKnown RBP16.43■□□□□ 0.22
PDE4C-210ENST00000597297 CPS1P31327 1500 aa16.43■□□□□ 0.22
PDE4C-210ENST00000597297 PPLO60437 1756 aa16.43■□□□□ 0.22
PDE4C-210ENST00000597297 NRXN3Q9Y4C0 1643 aa16.42■□□□□ 0.22
PDE4C-210ENST00000597297 KIF7Q2M1P5 1343 aa16.41■□□□□ 0.22
PDE4C-210ENST00000597297 LRRC7Q96NW7 1537 aa16.41■□□□□ 0.22
PDE4C-210ENST00000597297 CHD2O14647 1828 aaKnown RBP16.41■□□□□ 0.22
PDE4C-210ENST00000597297 PROSER2Q86WR7 435 aaPredicted RBP16.41■□□□□ 0.22
PDE4C-210ENST00000597297 AMOTL2Q9Y2J4 779 aa16.41■□□□□ 0.22
PDE4C-210ENST00000597297 METP08581 1390 aa16.4■□□□□ 0.22
PDE4C-210ENST00000597297 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
PDE4C-210ENST00000597297 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
PDE4C-210ENST00000597297 SETBP1Q9Y6X0 1596 aa16.4■□□□□ 0.22
PDE4C-210ENST00000597297 IQSEC2Q5JU85 1478 aa16.38■□□□□ 0.21
PDE4C-210ENST00000597297 PIK3R4Q99570 1358 aa16.38■□□□□ 0.21
PDE4C-210ENST00000597297 NRXN1Q9ULB1 1477 aa16.37■□□□□ 0.21
PDE4C-210ENST00000597297 ST20-MTHFSA0A0A6YYL1 179 aa16.37■□□□□ 0.21
PDE4C-210ENST00000597297 UBAP1LF5GYI3 381 aa16.37■□□□□ 0.21
PDE4C-210ENST00000597297 ANP32CO43423 234 aa16.37■□□□□ 0.21
PDE4C-210ENST00000597297 TMEM94Q12767 1356 aa16.36■□□□□ 0.21
PDE4C-210ENST00000597297 DIP2AQ14689 1571 aa16.36■□□□□ 0.21
PDE4C-210ENST00000597297 XIRP1Q702N8 1843 aaKnown RBP16.36■□□□□ 0.21
PDE4C-210ENST00000597297 ALKQ9UM73 1620 aa16.36■□□□□ 0.21
PDE4C-210ENST00000597297 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
PDE4C-210ENST00000597297 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
PDE4C-210ENST00000597297 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
PDE4C-210ENST00000597297 TOM1O60784 492 aa16.33■□□□□ 0.2
PDE4C-210ENST00000597297 C14orf93Q9H972 538 aaKnown RBP16.33■□□□□ 0.2
PDE4C-210ENST00000597297 YTHDC1Q96MU7 727 aaKnown RBP16.32■□□□□ 0.2
PDE4C-210ENST00000597297 SETD1AO15047 1707 aaKnown RBP16.32■□□□□ 0.2
PDE4C-210ENST00000597297 CENPBP07199 599 aaPredicted RBP16.31■□□□□ 0.2
PDE4C-210ENST00000597297 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
PDE4C-210ENST00000597297 NKTRP30414 1462 aaKnown RBP16.31■□□□□ 0.2
PDE4C-210ENST00000597297 CCER2I3L3R5 266 aa16.3■□□□□ 0.2
PDE4C-210ENST00000597297 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
PDE4C-210ENST00000597297 STK26Q9P289 416 aa16.3■□□□□ 0.2
PDE4C-210ENST00000597297 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.2
PDE4C-210ENST00000597297 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
PDE4C-210ENST00000597297 TESK2Q96S53 571 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms