RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 SCAF11Q99590 1463 aaKnown RBP16.53■□□□□ 0.24
SH2D3A-206ENST00000597254 NOS1P29475 1434 aa16.53■□□□□ 0.24
SH2D3A-206ENST00000597254 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
SH2D3A-206ENST00000597254 SCAF1Q9H7N4 1312 aaKnown RBP16.51■□□□□ 0.23
SH2D3A-206ENST00000597254 TOM1O60784 492 aa16.51■□□□□ 0.23
SH2D3A-206ENST00000597254 PPP1R15AO75807 674 aaPredicted RBP16.51■□□□□ 0.23
SH2D3A-206ENST00000597254 LTKP29376 864 aa16.5■□□□□ 0.23
SH2D3A-206ENST00000597254 IDI1Q13907 227 aa16.5■□□□□ 0.23
SH2D3A-206ENST00000597254 DISP3Q9P2K9 1392 aa16.5■□□□□ 0.23
SH2D3A-206ENST00000597254 SLIT1O75093 1534 aa16.5■□□□□ 0.23
SH2D3A-206ENST00000597254 ARHGAP23Q9P227 1491 aa16.49■□□□□ 0.23
SH2D3A-206ENST00000597254 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
SH2D3A-206ENST00000597254 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SH2D3A-206ENST00000597254 PIP4K2BP78356 416 aa16.48■□□□□ 0.23
SH2D3A-206ENST00000597254 SLC52A1Q9NWF4 448 aa16.48■□□□□ 0.23
SH2D3A-206ENST00000597254 TMEM2Q9UHN6 1383 aa16.48■□□□□ 0.23
SH2D3A-206ENST00000597254 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
SH2D3A-206ENST00000597254 SYNMO15061 1565 aa16.46■□□□□ 0.23
SH2D3A-206ENST00000597254 SPATA31E1Q6ZUB1 1445 aa16.45■□□□□ 0.22
SH2D3A-206ENST00000597254 KDM5AP29375 1690 aaKnown RBP16.44■□□□□ 0.22
SH2D3A-206ENST00000597254 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
SH2D3A-206ENST00000597254 KIF1BO60333 1816 aa16.43■□□□□ 0.22
SH2D3A-206ENST00000597254 LRRC7Q96NW7 1537 aa16.42■□□□□ 0.22
SH2D3A-206ENST00000597254 DCAF11Q8TEB1 546 aa16.42■□□□□ 0.22
SH2D3A-206ENST00000597254 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
SH2D3A-206ENST00000597254 STRCP1A6NGW2 1772 aa16.41■□□□□ 0.22
SH2D3A-206ENST00000597254 ADGRB3O60242 1522 aa16.41■□□□□ 0.22
SH2D3A-206ENST00000597254 BCANQ96GW7 911 aa16.41■□□□□ 0.22
SH2D3A-206ENST00000597254 HSPA1LP34931 641 aa16.4■□□□□ 0.22
SH2D3A-206ENST00000597254 HDGFP51858 240 aaKnown RBP16.39■□□□□ 0.21
SH2D3A-206ENST00000597254 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
SH2D3A-206ENST00000597254 ZNF326Q5BKZ1 582 aaKnown RBP16.38■□□□□ 0.21
SH2D3A-206ENST00000597254 STAC3Q96MF2 364 aa16.38■□□□□ 0.21
SH2D3A-206ENST00000597254 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
SH2D3A-206ENST00000597254 RPGRIP1LQ68CZ1 1315 aa16.36■□□□□ 0.21
SH2D3A-206ENST00000597254 KCNA6P17658 529 aa16.35■□□□□ 0.21
SH2D3A-206ENST00000597254 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
SH2D3A-206ENST00000597254 ILDR2Q71H61 639 aa16.34■□□□□ 0.21
SH2D3A-206ENST00000597254 SENP3Q9H4L4 574 aaPredicted RBP16.34■□□□□ 0.21
SH2D3A-206ENST00000597254 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
SH2D3A-206ENST00000597254 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.2
SH2D3A-206ENST00000597254 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.33■□□□□ 0.2
SH2D3A-206ENST00000597254 ALKQ9UM73 1620 aa16.33■□□□□ 0.2
SH2D3A-206ENST00000597254 MYO5BQ9ULV0 1848 aa16.33■□□□□ 0.2
SH2D3A-206ENST00000597254 ZFYVE9O95405 1425 aa16.32■□□□□ 0.2
SH2D3A-206ENST00000597254 TMEM94Q12767 1356 aa16.31■□□□□ 0.2
SH2D3A-206ENST00000597254 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
SH2D3A-206ENST00000597254 PRAG1Q86YV5 1406 aa16.29■□□□□ 0.2
SH2D3A-206ENST00000597254 ADGRF5Q8IZF2 1346 aa16.29■□□□□ 0.2
SH2D3A-206ENST00000597254 IFT172Q9UG01 1749 aa16.29■□□□□ 0.2
SH2D3A-206ENST00000597254 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
SH2D3A-206ENST00000597254 XIRP1Q702N8 1843 aaKnown RBP16.29■□□□□ 0.2
SH2D3A-206ENST00000597254 PPLO60437 1756 aa16.28■□□□□ 0.2
SH2D3A-206ENST00000597254 NUTM2DQ5VT03 806 aaPredicted RBP16.28■□□□□ 0.2
SH2D3A-206ENST00000597254 MYOM2P54296 1465 aa16.28■□□□□ 0.2
SH2D3A-206ENST00000597254 RBM33Q96EV2 1170 aaKnown RBP16.27■□□□□ 0.2
SH2D3A-206ENST00000597254 TBX22Q9Y458 520 aa16.27■□□□□ 0.2
SH2D3A-206ENST00000597254 NEXMIFQ5QGS0 1516 aa16.27■□□□□ 0.2
SH2D3A-206ENST00000597254 NKTRP30414 1462 aaKnown RBP16.27■□□□□ 0.19
SH2D3A-206ENST00000597254 SOCS7O14512 581 aa16.25■□□□□ 0.19
SH2D3A-206ENST00000597254 NWD1Q149M9 1564 aa16.25■□□□□ 0.19
SH2D3A-206ENST00000597254 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
SH2D3A-206ENST00000597254 MED1Q15648 1581 aaPredicted RBP16.24■□□□□ 0.19
SH2D3A-206ENST00000597254 MSH6P52701 1360 aa16.24■□□□□ 0.19
SH2D3A-206ENST00000597254 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
SH2D3A-206ENST00000597254 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
SH2D3A-206ENST00000597254 TRPM1Q7Z4N2 1603 aa16.23■□□□□ 0.19
SH2D3A-206ENST00000597254 CHD2O14647 1828 aaKnown RBP16.22■□□□□ 0.19
SH2D3A-206ENST00000597254 FAM135BQ49AJ0 1406 aa16.22■□□□□ 0.19
SH2D3A-206ENST00000597254 CFAP70Q5T0N1 1121 aa16.22■□□□□ 0.19
SH2D3A-206ENST00000597254 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
SH2D3A-206ENST00000597254 C14orf93Q9H972 538 aaKnown RBP16.22■□□□□ 0.19
SH2D3A-206ENST00000597254 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
SH2D3A-206ENST00000597254 CARD11Q9BXL7 1154 aa16.21■□□□□ 0.19
SH2D3A-206ENST00000597254 ROCK2O75116 1388 aaKnown RBP16.21■□□□□ 0.19
SH2D3A-206ENST00000597254 ADAMTS13Q76LX8 1427 aa16.2■□□□□ 0.18
SH2D3A-206ENST00000597254 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
SH2D3A-206ENST00000597254 PIK3R4Q99570 1358 aa16.2■□□□□ 0.18
SH2D3A-206ENST00000597254 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
SH2D3A-206ENST00000597254 PIK3C2GO75747 1445 aa16.19■□□□□ 0.18
SH2D3A-206ENST00000597254 EIF4G2P78344 907 aaKnown RBP eCLIP16.19■□□□□ 0.18
SH2D3A-206ENST00000597254 GPRASP1Q5JY77 1395 aa16.18■□□□□ 0.18
SH2D3A-206ENST00000597254 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
SH2D3A-206ENST00000597254 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
SH2D3A-206ENST00000597254 KIAA1210Q9ULL0 1709 aa16.18■□□□□ 0.18
SH2D3A-206ENST00000597254 HIRIP3Q9BW71 556 aaPredicted RBP16.17■□□□□ 0.18
SH2D3A-206ENST00000597254 NCOA3Q9Y6Q9 1424 aa16.17■□□□□ 0.18
SH2D3A-206ENST00000597254 AMOTL2Q9Y2J4 779 aa16.16■□□□□ 0.18
SH2D3A-206ENST00000597254 ROBO1Q9Y6N7 1651 aa16.15■□□□□ 0.18
SH2D3A-206ENST00000597254 TMEM132EQ6IEE7 984 aa16.14■□□□□ 0.17
SH2D3A-206ENST00000597254 C19orf44Q9H6X5 657 aa16.14■□□□□ 0.17
SH2D3A-206ENST00000597254 LAMC1P11047 1609 aa16.13■□□□□ 0.17
SH2D3A-206ENST00000597254 ATF3P18847 181 aa16.13■□□□□ 0.17
SH2D3A-206ENST00000597254 CADPS2Q86UW7 1296 aa16.13■□□□□ 0.17
SH2D3A-206ENST00000597254 USP47Q96K76 1375 aa16.13■□□□□ 0.17
SH2D3A-206ENST00000597254 SETBP1Q9Y6X0 1596 aa16.12■□□□□ 0.17
SH2D3A-206ENST00000597254 PTPRUQ92729 1446 aa16.11■□□□□ 0.17
SH2D3A-206ENST00000597254 ST20-MTHFSA0A0A6YYL1 179 aa16.1■□□□□ 0.17
SH2D3A-206ENST00000597254 NRXN3Q9Y4C0 1643 aa16.09■□□□□ 0.17
SH2D3A-206ENST00000597254 ADGRB1O14514 1584 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms