RNA–Protein interactions for RNA: ENST00000596655.1

C19orf48-207, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 1,639 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-207ENST00000596655 SPHKAPQ2M3C7 1700 aa27.88■■■□□ 2.05
C19orf48-207ENST00000596655 TMEM131LA2VDJ0 1609 aa27.88■■■□□ 2.05
C19orf48-207ENST00000596655 IQSEC2Q5JU85 1478 aa27.87■■■□□ 2.05
C19orf48-207ENST00000596655 EID1Q9Y6B2 187 aa27.86■■■□□ 2.05
C19orf48-207ENST00000596655 CPS1P31327 1500 aa27.82■■■□□ 2.04
C19orf48-207ENST00000596655 STRCP1A6NGW2 1772 aa27.81■■■□□ 2.04
C19orf48-207ENST00000596655 TRIM52Q96A61 297 aa27.8■■■□□ 2.04
C19orf48-207ENST00000596655 ZFYVE9O95405 1425 aa27.77■■■□□ 2.04
C19orf48-207ENST00000596655 CHGAP10645 457 aaKnown RBP27.77■■■□□ 2.04
C19orf48-207ENST00000596655 RIMS2Q9UQ26 1411 aa27.74■■■□□ 2.03
C19orf48-207ENST00000596655 TRPM2O94759 1503 aa27.73■■■□□ 2.03
C19orf48-207ENST00000596655 SIN3AQ96ST3 1273 aa27.73■■■□□ 2.03
C19orf48-207ENST00000596655 CLTCL1P53675 1640 aa27.73■■■□□ 2.03
C19orf48-207ENST00000596655 SLC4A1APQ9BWU0 796 aaKnown RBP27.7■■■□□ 2.02
C19orf48-207ENST00000596655 KIF1BO60333 1816 aa27.67■■■□□ 2.02
C19orf48-207ENST00000596655 PPP1R15AO75807 674 aaPredicted RBP27.67■■■□□ 2.02
C19orf48-207ENST00000596655 SLC26A8Q96RN1 970 aa27.67■■■□□ 2.02
C19orf48-207ENST00000596655 PLEKHG1Q9ULL1 1385 aa27.66■■■□□ 2.02
C19orf48-207ENST00000596655 HDGFP51858 240 aaKnown RBP27.66■■■□□ 2.02
C19orf48-207ENST00000596655 LRRC7Q96NW7 1537 aa27.66■■■□□ 2.02
C19orf48-207ENST00000596655 SENP3Q9H4L4 574 aaPredicted RBP27.65■■■□□ 2.02
C19orf48-207ENST00000596655 UBAP1LF5GYI3 381 aa27.64■■■□□ 2.02
C19orf48-207ENST00000596655 BCANQ96GW7 911 aa27.64■■■□□ 2.02
C19orf48-207ENST00000596655 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.63■■■□□ 2.01
C19orf48-207ENST00000596655 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
C19orf48-207ENST00000596655 NEUROD1Q13562 356 aa27.61■■■□□ 2.01
C19orf48-207ENST00000596655 XIRP1Q702N8 1843 aaKnown RBP27.61■■■□□ 2.01
C19orf48-207ENST00000596655 NWD1Q149M9 1564 aa27.59■■■□□ 2.01
C19orf48-207ENST00000596655 FOXD1Q16676 465 aa27.57■■■□□ 2
C19orf48-207ENST00000596655 MPHOSPH9Q99550 1183 aa27.57■■■□□ 2
C19orf48-207ENST00000596655 CHD2O14647 1828 aaKnown RBP27.57■■■□□ 2
C19orf48-207ENST00000596655 ZNF326Q5BKZ1 582 aaKnown RBP27.56■■■□□ 2
C19orf48-207ENST00000596655 TONSLQ96HA7 1378 aa27.56■■■□□ 2
C19orf48-207ENST00000596655 DIP2AQ14689 1571 aa27.55■■■□□ 2
C19orf48-207ENST00000596655 NEXMIFQ5QGS0 1516 aa27.55■■■□□ 2
C19orf48-207ENST00000596655 KCNA6P17658 529 aa27.55■■■□□ 2
C19orf48-207ENST00000596655 ADAMTS13Q76LX8 1427 aa27.55■■■□□ 2
C19orf48-207ENST00000596655 ALKQ9UM73 1620 aa27.53■■■□□ 2
C19orf48-207ENST00000596655 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
C19orf48-207ENST00000596655 TOM1O60784 492 aa27.52■■■□□ 2
C19orf48-207ENST00000596655 NKTRP30414 1462 aaKnown RBP27.52■■■□□ 2
C19orf48-207ENST00000596655 TBX22Q9Y458 520 aa27.51■■□□□ 1.99
C19orf48-207ENST00000596655 SETBP1Q9Y6X0 1596 aa27.5■■□□□ 1.99
C19orf48-207ENST00000596655 ANKRD30BQ9BXX2 1392 aa27.49■■□□□ 1.99
C19orf48-207ENST00000596655 TMEM94Q12767 1356 aa27.47■■□□□ 1.99
C19orf48-207ENST00000596655 PIP4K2BP78356 416 aa27.47■■□□□ 1.99
C19orf48-207ENST00000596655 SCAF1Q9H7N4 1312 aaKnown RBP27.47■■□□□ 1.99
C19orf48-207ENST00000596655 CCDC144AA2RUR9 1427 aa27.46■■□□□ 1.99
C19orf48-207ENST00000596655 PPLO60437 1756 aa27.46■■□□□ 1.99
C19orf48-207ENST00000596655 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.98
C19orf48-207ENST00000596655 PIK3R4Q99570 1358 aa27.43■■□□□ 1.98
C19orf48-207ENST00000596655 RBM33Q96EV2 1170 aaKnown RBP27.42■■□□□ 1.98
C19orf48-207ENST00000596655 PTPRUQ92729 1446 aa27.38■■□□□ 1.97
C19orf48-207ENST00000596655 RPGRIP1LQ68CZ1 1315 aa27.38■■□□□ 1.97
C19orf48-207ENST00000596655 MIER1Q8N108 512 aa27.38■■□□□ 1.97
C19orf48-207ENST00000596655 XRN1Q8IZH2 1706 aaKnown RBP27.37■■□□□ 1.97
C19orf48-207ENST00000596655 SPATA31E1Q6ZUB1 1445 aa27.37■■□□□ 1.97
C19orf48-207ENST00000596655 IFT172Q9UG01 1749 aa27.37■■□□□ 1.97
C19orf48-207ENST00000596655 SETD1AO15047 1707 aaKnown RBP27.36■■□□□ 1.97
C19orf48-207ENST00000596655 VGFO15240 615 aaPredicted RBP27.35■■□□□ 1.97
C19orf48-207ENST00000596655 METP08581 1390 aa27.33■■□□□ 1.97
C19orf48-207ENST00000596655 AMOTL2Q9Y2J4 779 aa27.33■■□□□ 1.97
C19orf48-207ENST00000596655 HSPA1LP34931 641 aa27.32■■□□□ 1.96
C19orf48-207ENST00000596655 RGL3Q3MIN7 710 aa27.31■■□□□ 1.96
C19orf48-207ENST00000596655 MSH6P52701 1360 aa27.31■■□□□ 1.96
C19orf48-207ENST00000596655 NCOA3Q9Y6Q9 1424 aa27.29■■□□□ 1.96
C19orf48-207ENST00000596655 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.26■■□□□ 1.95
C19orf48-207ENST00000596655 C14orf37Q86TY3 774 aa27.25■■□□□ 1.95
C19orf48-207ENST00000596655 ROBO1Q9Y6N7 1651 aa27.25■■□□□ 1.95
C19orf48-207ENST00000596655 ADGRF5Q8IZF2 1346 aa27.23■■□□□ 1.95
C19orf48-207ENST00000596655 L3MBTL2Q969R5 705 aa27.23■■□□□ 1.95
C19orf48-207ENST00000596655 FAM135BQ49AJ0 1406 aa27.22■■□□□ 1.95
C19orf48-207ENST00000596655 C19orf44Q9H6X5 657 aa27.18■■□□□ 1.94
C19orf48-207ENST00000596655 NALCNQ8IZF0 1738 aa27.17■■□□□ 1.94
C19orf48-207ENST00000596655 PIK3C2GO75747 1445 aa27.17■■□□□ 1.94
C19orf48-207ENST00000596655 SLAIN2Q9P270 581 aa27.16■■□□□ 1.94
C19orf48-207ENST00000596655 PTCH1Q13635 1447 aa27.15■■□□□ 1.94
C19orf48-207ENST00000596655 MYOM2P54296 1465 aa27.15■■□□□ 1.94
C19orf48-207ENST00000596655 PRAG1Q86YV5 1406 aa27.14■■□□□ 1.94
C19orf48-207ENST00000596655 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.94
C19orf48-207ENST00000596655 CADPS2Q86UW7 1296 aa27.14■■□□□ 1.94
C19orf48-207ENST00000596655 DCCP43146 1447 aa27.13■■□□□ 1.93
C19orf48-207ENST00000596655 ATF3P18847 181 aa27.13■■□□□ 1.93
C19orf48-207ENST00000596655 ADGRL3Q9HAR2 1447 aa27.13■■□□□ 1.93
C19orf48-207ENST00000596655 ASXL1Q8IXJ9 1541 aa27.13■■□□□ 1.93
C19orf48-207ENST00000596655 ROBO2Q9HCK4 1378 aa27.12■■□□□ 1.93
C19orf48-207ENST00000596655 DISP3Q9P2K9 1392 aa27.12■■□□□ 1.93
C19orf48-207ENST00000596655 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
C19orf48-207ENST00000596655 LAMC1P11047 1609 aa27.1■■□□□ 1.93
C19orf48-207ENST00000596655 PHLPP1O60346 1717 aa27.08■■□□□ 1.93
C19orf48-207ENST00000596655 MED1Q15648 1581 aaPredicted RBP27.08■■□□□ 1.93
C19orf48-207ENST00000596655 KNDC1Q76NI1 1749 aa27.08■■□□□ 1.93
C19orf48-207ENST00000596655 TMEM132EQ6IEE7 984 aa27.05■■□□□ 1.92
C19orf48-207ENST00000596655 MST1RQ04912 1400 aa27.04■■□□□ 1.92
C19orf48-207ENST00000596655 NBPF8Q3BBV2 869 aa27.04■■□□□ 1.92
C19orf48-207ENST00000596655 LRPPRCP42704 1394 aaKnown RBP27.04■■□□□ 1.92
C19orf48-207ENST00000596655 TECPR2O15040 1411 aa27.04■■□□□ 1.92
C19orf48-207ENST00000596655 STK26Q9P289 416 aa27.03■■□□□ 1.92
C19orf48-207ENST00000596655 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
C19orf48-207ENST00000596655 YTHDC2Q9H6S0 1430 aaKnown RBP27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms