RNA–Protein interactions for RNA: ENST00000596348.2

SCN1B-204, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 1,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-204ENST00000596348 KIF1BO60333 1816 aa22.22■■□□□ 1.15
SCN1B-204ENST00000596348 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
SCN1B-204ENST00000596348 NUTM2DQ5VT03 806 aaPredicted RBP22.17■■□□□ 1.14
SCN1B-204ENST00000596348 CCDC144AA2RUR9 1427 aa22.16■■□□□ 1.14
SCN1B-204ENST00000596348 PLEKHG1Q9ULL1 1385 aa22.15■■□□□ 1.14
SCN1B-204ENST00000596348 NEXMIFQ5QGS0 1516 aa22.15■■□□□ 1.14
SCN1B-204ENST00000596348 STRCP1A6NGW2 1772 aa22.15■■□□□ 1.14
SCN1B-204ENST00000596348 CERKQ8TCT0 537 aa22.14■■□□□ 1.13
SCN1B-204ENST00000596348 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
SCN1B-204ENST00000596348 PPP1R15AO75807 674 aaPredicted RBP22.13■■□□□ 1.13
SCN1B-204ENST00000596348 ZNF326Q5BKZ1 582 aaKnown RBP22.13■■□□□ 1.13
SCN1B-204ENST00000596348 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.13■■□□□ 1.13
SCN1B-204ENST00000596348 HDGFP51858 240 aaKnown RBP22.12■■□□□ 1.13
SCN1B-204ENST00000596348 SPATA31E1Q6ZUB1 1445 aa22.12■■□□□ 1.13
SCN1B-204ENST00000596348 ANKRD30BQ9BXX2 1392 aa22.12■■□□□ 1.13
SCN1B-204ENST00000596348 SLC26A8Q96RN1 970 aa22.11■■□□□ 1.13
SCN1B-204ENST00000596348 ADAMTS13Q76LX8 1427 aa22.08■■□□□ 1.13
SCN1B-204ENST00000596348 PPLO60437 1756 aa22.08■■□□□ 1.13
SCN1B-204ENST00000596348 NRXN3Q9Y4C0 1643 aa22.08■■□□□ 1.13
SCN1B-204ENST00000596348 CPS1P31327 1500 aa22.07■■□□□ 1.12
SCN1B-204ENST00000596348 BCANQ96GW7 911 aa22.07■■□□□ 1.12
SCN1B-204ENST00000596348 SETBP1Q9Y6X0 1596 aa22.05■■□□□ 1.12
SCN1B-204ENST00000596348 RPGRIP1LQ68CZ1 1315 aa22.04■■□□□ 1.12
SCN1B-204ENST00000596348 DIP2AQ14689 1571 aa22.04■■□□□ 1.12
SCN1B-204ENST00000596348 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
SCN1B-204ENST00000596348 RGL3Q3MIN7 710 aa22.03■■□□□ 1.12
SCN1B-204ENST00000596348 IQSEC2Q5JU85 1478 aa22.03■■□□□ 1.12
SCN1B-204ENST00000596348 TBX22Q9Y458 520 aa22.02■■□□□ 1.12
SCN1B-204ENST00000596348 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
SCN1B-204ENST00000596348 CHD2O14647 1828 aaKnown RBP22.01■■□□□ 1.11
SCN1B-204ENST00000596348 LRRC7Q96NW7 1537 aa22.01■■□□□ 1.11
SCN1B-204ENST00000596348 KCNA6P17658 529 aa21.99■■□□□ 1.11
SCN1B-204ENST00000596348 VGFO15240 615 aaPredicted RBP21.98■■□□□ 1.11
SCN1B-204ENST00000596348 FBXO41Q8TF61 875 aa21.98■■□□□ 1.11
SCN1B-204ENST00000596348 SETD1AO15047 1707 aaKnown RBP21.97■■□□□ 1.11
SCN1B-204ENST00000596348 XIRP1Q702N8 1843 aaKnown RBP21.96■■□□□ 1.11
SCN1B-204ENST00000596348 ILDR1Q86SU0 546 aaPredicted RBP21.96■■□□□ 1.11
SCN1B-204ENST00000596348 ADGRF5Q8IZF2 1346 aa21.96■■□□□ 1.11
SCN1B-204ENST00000596348 DHX57Q6P158 1386 aaKnown RBP21.95■■□□□ 1.1
SCN1B-204ENST00000596348 PIK3R4Q99570 1358 aa21.95■■□□□ 1.1
SCN1B-204ENST00000596348 PTPRUQ92729 1446 aa21.95■■□□□ 1.1
SCN1B-204ENST00000596348 NKTRP30414 1462 aaKnown RBP21.95■■□□□ 1.1
SCN1B-204ENST00000596348 METP08581 1390 aa21.94■■□□□ 1.1
SCN1B-204ENST00000596348 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
SCN1B-204ENST00000596348 XRN1Q8IZH2 1706 aaKnown RBP21.92■■□□□ 1.1
SCN1B-204ENST00000596348 MYOM2P54296 1465 aa21.9■■□□□ 1.1
SCN1B-204ENST00000596348 PIK3C2GO75747 1445 aa21.9■■□□□ 1.1
SCN1B-204ENST00000596348 TMEM94Q12767 1356 aa21.9■■□□□ 1.1
SCN1B-204ENST00000596348 NRXN1Q9ULB1 1477 aa21.9■■□□□ 1.1
SCN1B-204ENST00000596348 PROSER2Q86WR7 435 aaPredicted RBP21.89■■□□□ 1.09
SCN1B-204ENST00000596348 RBM33Q96EV2 1170 aaKnown RBP21.89■■□□□ 1.09
SCN1B-204ENST00000596348 AMOTL2Q9Y2J4 779 aa21.88■■□□□ 1.09
SCN1B-204ENST00000596348 PCGF6Q9BYE7 350 aa21.87■■□□□ 1.09
SCN1B-204ENST00000596348 UBAP1LF5GYI3 381 aa21.86■■□□□ 1.09
SCN1B-204ENST00000596348 ASXL1Q8IXJ9 1541 aa21.85■■□□□ 1.09
SCN1B-204ENST00000596348 SIN3AQ96ST3 1273 aa21.83■■□□□ 1.09
SCN1B-204ENST00000596348 DCAF11Q8TEB1 546 aa21.82■■□□□ 1.08
SCN1B-204ENST00000596348 KDM2AQ9Y2K7 1162 aa21.81■■□□□ 1.08
SCN1B-204ENST00000596348 LAMC1P11047 1609 aa21.8■■□□□ 1.08
SCN1B-204ENST00000596348 PRAG1Q86YV5 1406 aa21.8■■□□□ 1.08
SCN1B-204ENST00000596348 C14orf93Q9H972 538 aaKnown RBP21.79■■□□□ 1.08
SCN1B-204ENST00000596348 CFAP70Q5T0N1 1121 aa21.78■■□□□ 1.08
SCN1B-204ENST00000596348 PTCH1Q13635 1447 aa21.78■■□□□ 1.08
SCN1B-204ENST00000596348 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
SCN1B-204ENST00000596348 ROBO2Q9HCK4 1378 aa21.77■■□□□ 1.08
SCN1B-204ENST00000596348 TOM1O60784 492 aa21.77■■□□□ 1.08
SCN1B-204ENST00000596348 TMEM132EQ6IEE7 984 aa21.77■■□□□ 1.08
SCN1B-204ENST00000596348 NEUROD1Q13562 356 aa21.75■■□□□ 1.07
SCN1B-204ENST00000596348 STAC3Q96MF2 364 aa21.75■■□□□ 1.07
SCN1B-204ENST00000596348 LRPPRCP42704 1394 aaKnown RBP21.74■■□□□ 1.07
SCN1B-204ENST00000596348 MSH6P52701 1360 aa21.74■■□□□ 1.07
SCN1B-204ENST00000596348 PIP4K2BP78356 416 aa21.74■■□□□ 1.07
SCN1B-204ENST00000596348 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.74■■□□□ 1.07
SCN1B-204ENST00000596348 TECPR2O15040 1411 aa21.73■■□□□ 1.07
SCN1B-204ENST00000596348 KNDC1Q76NI1 1749 aa21.73■■□□□ 1.07
SCN1B-204ENST00000596348 NALCNQ8IZF0 1738 aa21.73■■□□□ 1.07
SCN1B-204ENST00000596348 ADGRB1O14514 1584 aa21.73■■□□□ 1.07
SCN1B-204ENST00000596348 YTHDC2Q9H6S0 1430 aaKnown RBP21.72■■□□□ 1.07
SCN1B-204ENST00000596348 C14orf37Q86TY3 774 aa21.72■■□□□ 1.07
SCN1B-204ENST00000596348 L3MBTL2Q969R5 705 aa21.72■■□□□ 1.07
SCN1B-204ENST00000596348 STK26Q9P289 416 aa21.72■■□□□ 1.07
SCN1B-204ENST00000596348 SCAF1Q9H7N4 1312 aaKnown RBP21.71■■□□□ 1.07
SCN1B-204ENST00000596348 ABCC11Q96J66 1382 aa21.71■■□□□ 1.07
SCN1B-204ENST00000596348 ADGRL3Q9HAR2 1447 aa21.7■■□□□ 1.06
SCN1B-204ENST00000596348 C19orf44Q9H6X5 657 aa21.69■■□□□ 1.06
SCN1B-204ENST00000596348 DCCP43146 1447 aa21.66■■□□□ 1.06
SCN1B-204ENST00000596348 PLEKHH1Q9ULM0 1364 aa21.66■■□□□ 1.06
SCN1B-204ENST00000596348 KIAA1210Q9ULL0 1709 aa21.66■■□□□ 1.06
SCN1B-204ENST00000596348 WAPLQ7Z5K2 1190 aa21.65■■□□□ 1.06
SCN1B-204ENST00000596348 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
SCN1B-204ENST00000596348 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
SCN1B-204ENST00000596348 ATF3P18847 181 aa21.63■■□□□ 1.05
SCN1B-204ENST00000596348 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
SCN1B-204ENST00000596348 FAM135BQ49AJ0 1406 aa21.63■■□□□ 1.05
SCN1B-204ENST00000596348 DLC1Q96QB1 1528 aa21.62■■□□□ 1.05
SCN1B-204ENST00000596348 HSPA1LP34931 641 aa21.61■■□□□ 1.05
SCN1B-204ENST00000596348 MST1RQ04912 1400 aa21.61■■□□□ 1.05
SCN1B-204ENST00000596348 NBPF1Q3BBV0 1214 aa21.6■■□□□ 1.05
SCN1B-204ENST00000596348 SIRT1Q96EB6 747 aa21.6■■□□□ 1.05
SCN1B-204ENST00000596348 TONSLQ96HA7 1378 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms