RNA–Protein interactions for RNA: ENST00000596287.5

C19orf48-205, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 827 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-205ENST00000596287 PHF23Q9BUL5 403 aaPredicted RBP17.73■□□□□ 0.43
C19orf48-205ENST00000596287 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
C19orf48-205ENST00000596287 NUP155O75694 1391 aa17.71■□□□□ 0.43
C19orf48-205ENST00000596287 ZFYVE9O95405 1425 aa17.71■□□□□ 0.43
C19orf48-205ENST00000596287 SLC26A8Q96RN1 970 aa17.7■□□□□ 0.42
C19orf48-205ENST00000596287 SLC52A1Q9NWF4 448 aa17.7■□□□□ 0.42
C19orf48-205ENST00000596287 RIMS2Q9UQ26 1411 aa17.68■□□□□ 0.42
C19orf48-205ENST00000596287 NWD1Q149M9 1564 aa17.66■□□□□ 0.42
C19orf48-205ENST00000596287 SPHKAPQ2M3C7 1700 aa17.66■□□□□ 0.42
C19orf48-205ENST00000596287 CHGAP10645 457 aaKnown RBP17.65■□□□□ 0.42
C19orf48-205ENST00000596287 RBM33Q96EV2 1170 aaKnown RBP17.65■□□□□ 0.42
C19orf48-205ENST00000596287 NUTM2DQ5VT03 806 aaPredicted RBP17.64■□□□□ 0.41
C19orf48-205ENST00000596287 NAIPQ13075 1403 aa17.64■□□□□ 0.41
C19orf48-205ENST00000596287 TMEM94Q12767 1356 aa17.63■□□□□ 0.41
C19orf48-205ENST00000596287 PLEKHG1Q9ULL1 1385 aa17.63■□□□□ 0.41
C19orf48-205ENST00000596287 CHD2O14647 1828 aaKnown RBP17.61■□□□□ 0.41
C19orf48-205ENST00000596287 KCNA6P17658 529 aa17.61■□□□□ 0.41
C19orf48-205ENST00000596287 BCANQ96GW7 911 aa17.61■□□□□ 0.41
C19orf48-205ENST00000596287 PPP1R15AO75807 674 aaPredicted RBP17.6■□□□□ 0.41
C19orf48-205ENST00000596287 CLTCL1P53675 1640 aa17.59■□□□□ 0.41
C19orf48-205ENST00000596287 NKTRP30414 1462 aaKnown RBP17.59■□□□□ 0.41
C19orf48-205ENST00000596287 ADAMTS13Q76LX8 1427 aa17.59■□□□□ 0.41
C19orf48-205ENST00000596287 PROSER2Q86WR7 435 aaPredicted RBP17.57■□□□□ 0.4
C19orf48-205ENST00000596287 NRXN3Q9Y4C0 1643 aa17.56■□□□□ 0.4
C19orf48-205ENST00000596287 HFM1A2PYH4 1435 aa17.55■□□□□ 0.4
C19orf48-205ENST00000596287 TRPM2O94759 1503 aa17.55■□□□□ 0.4
C19orf48-205ENST00000596287 ROBO1Q9Y6N7 1651 aa17.54■□□□□ 0.4
C19orf48-205ENST00000596287 DIP2AQ14689 1571 aa17.53■□□□□ 0.4
C19orf48-205ENST00000596287 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.52■□□□□ 0.4
C19orf48-205ENST00000596287 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
C19orf48-205ENST00000596287 TBX22Q9Y458 520 aa17.51■□□□□ 0.39
C19orf48-205ENST00000596287 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
C19orf48-205ENST00000596287 HDGFP51858 240 aaKnown RBP17.5■□□□□ 0.39
C19orf48-205ENST00000596287 SETBP1Q9Y6X0 1596 aa17.49■□□□□ 0.39
C19orf48-205ENST00000596287 KIF1BO60333 1816 aa17.49■□□□□ 0.39
C19orf48-205ENST00000596287 TRIM52Q96A61 297 aa17.49■□□□□ 0.39
C19orf48-205ENST00000596287 RGS17Q9UGC6 210 aaPredicted RBP17.49■□□□□ 0.39
C19orf48-205ENST00000596287 FAM135BQ49AJ0 1406 aa17.48■□□□□ 0.39
C19orf48-205ENST00000596287 XRN1Q8IZH2 1706 aaKnown RBP17.48■□□□□ 0.39
C19orf48-205ENST00000596287 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
C19orf48-205ENST00000596287 MSH6P52701 1360 aa17.47■□□□□ 0.39
C19orf48-205ENST00000596287 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.46■□□□□ 0.39
C19orf48-205ENST00000596287 PIK3R4Q99570 1358 aa17.44■□□□□ 0.38
C19orf48-205ENST00000596287 FOXD1Q16676 465 aa17.44■□□□□ 0.38
C19orf48-205ENST00000596287 METP08581 1390 aa17.43■□□□□ 0.38
C19orf48-205ENST00000596287 SLC4A1APQ9BWU0 796 aaKnown RBP17.43■□□□□ 0.38
C19orf48-205ENST00000596287 AMOTL2Q9Y2J4 779 aa17.43■□□□□ 0.38
C19orf48-205ENST00000596287 SETD1AO15047 1707 aaKnown RBP17.42■□□□□ 0.38
C19orf48-205ENST00000596287 PHLPP1O60346 1717 aa17.42■□□□□ 0.38
C19orf48-205ENST00000596287 PPLO60437 1756 aa17.4■□□□□ 0.38
C19orf48-205ENST00000596287 C14orf37Q86TY3 774 aa17.4■□□□□ 0.38
C19orf48-205ENST00000596287 SLAIN2Q9P270 581 aa17.4■□□□□ 0.38
C19orf48-205ENST00000596287 NCOA3Q9Y6Q9 1424 aa17.39■□□□□ 0.38
C19orf48-205ENST00000596287 COL16A1Q07092 1604 aaPredicted RBP17.39■□□□□ 0.37
C19orf48-205ENST00000596287 NALCNQ8IZF0 1738 aa17.38■□□□□ 0.37
C19orf48-205ENST00000596287 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
C19orf48-205ENST00000596287 C19orf44Q9H6X5 657 aa17.34■□□□□ 0.37
C19orf48-205ENST00000596287 IFT172Q9UG01 1749 aa17.33■□□□□ 0.37
C19orf48-205ENST00000596287 AHDC1Q5TGY3 1603 aaPredicted RBP17.33■□□□□ 0.37
C19orf48-205ENST00000596287 MPHOSPH9Q99550 1183 aa17.33■□□□□ 0.36
C19orf48-205ENST00000596287 ATF3P18847 181 aa17.32■□□□□ 0.36
C19orf48-205ENST00000596287 MST1RQ04912 1400 aa17.31■□□□□ 0.36
C19orf48-205ENST00000596287 CADPS2Q86UW7 1296 aa17.31■□□□□ 0.36
C19orf48-205ENST00000596287 CCDC144AA2RUR9 1427 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 DCCP43146 1447 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 SPATA31E1Q6ZUB1 1445 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 ADGRL3Q9HAR2 1447 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 SETD5Q9C0A6 1442 aa17.3■□□□□ 0.36
C19orf48-205ENST00000596287 ROBO2Q9HCK4 1378 aa17.29■□□□□ 0.36
C19orf48-205ENST00000596287 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
C19orf48-205ENST00000596287 LRP6O75581 1613 aa17.29■□□□□ 0.36
C19orf48-205ENST00000596287 ADGRF5Q8IZF2 1346 aa17.28■□□□□ 0.36
C19orf48-205ENST00000596287 VGFO15240 615 aaPredicted RBP17.28■□□□□ 0.36
C19orf48-205ENST00000596287 PTCH1Q13635 1447 aa17.28■□□□□ 0.36
C19orf48-205ENST00000596287 NHSL1Q5SYE7 1610 aa17.28■□□□□ 0.36
C19orf48-205ENST00000596287 JCADQ9P266 1359 aa17.28■□□□□ 0.36
C19orf48-205ENST00000596287 RPGRIP1LQ68CZ1 1315 aa17.27■□□□□ 0.36
C19orf48-205ENST00000596287 SHPRHQ149N8 1683 aa17.27■□□□□ 0.36
C19orf48-205ENST00000596287 RGL3Q3MIN7 710 aa17.27■□□□□ 0.36
C19orf48-205ENST00000596287 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.35
C19orf48-205ENST00000596287 PRAG1Q86YV5 1406 aa17.24■□□□□ 0.35
C19orf48-205ENST00000596287 DDX17Q92841 729 aaKnown RBP17.24■□□□□ 0.35
C19orf48-205ENST00000596287 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
C19orf48-205ENST00000596287 C1orf167Q5SNV9 1468 aa17.21■□□□□ 0.35
C19orf48-205ENST00000596287 PIK3C2GO75747 1445 aa17.21■□□□□ 0.34
C19orf48-205ENST00000596287 ZNF772Q68DY9 489 aaPredicted RBP17.2■□□□□ 0.34
C19orf48-205ENST00000596287 KNDC1Q76NI1 1749 aa17.19■□□□□ 0.34
C19orf48-205ENST00000596287 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
C19orf48-205ENST00000596287 ANKRD30BQ9BXX2 1392 aa17.18■□□□□ 0.34
C19orf48-205ENST00000596287 TMEM132EQ6IEE7 984 aa17.18■□□□□ 0.34
C19orf48-205ENST00000596287 UPF1Q92900 1129 aaKnown RBP eCLIP17.18■□□□□ 0.34not detected■■■■■ 38.3
C19orf48-205ENST00000596287 STK26Q9P289 416 aa17.18■□□□□ 0.34
C19orf48-205ENST00000596287 PLEKHH1Q9ULM0 1364 aa17.17■□□□□ 0.34
C19orf48-205ENST00000596287 CDC42BPGQ6DT37 1551 aa17.17■□□□□ 0.34
C19orf48-205ENST00000596287 ORAI2Q96SN7 254 aa17.17■□□□□ 0.34
C19orf48-205ENST00000596287 LAMC1P11047 1609 aa17.17■□□□□ 0.34
C19orf48-205ENST00000596287 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
C19orf48-205ENST00000596287 TECPR2O15040 1411 aa17.15■□□□□ 0.34
C19orf48-205ENST00000596287 NUTM2BA6NNL0 878 aaPredicted RBP17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms