RNA–Protein interactions for RNA: ENST00000596250.5

SOX2-OT-225, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 610 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-225ENST00000596250 IQGAP1P46940 1657 aa20.13■□□□□ 0.81
SOX2-OT-225ENST00000596250 ZNF335Q9H4Z2 1342 aaPredicted RBP20.11■□□□□ 0.81
SOX2-OT-225ENST00000596250 MYO5BQ9ULV0 1848 aa20.11■□□□□ 0.81
SOX2-OT-225ENST00000596250 LTBP4Q8N2S1 1624 aa20.09■□□□□ 0.81
SOX2-OT-225ENST00000596250 CCDC144AA2RUR9 1427 aa20.07■□□□□ 0.8
SOX2-OT-225ENST00000596250 NUTM2DQ5VT03 806 aaPredicted RBP20.06■□□□□ 0.8
SOX2-OT-225ENST00000596250 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
SOX2-OT-225ENST00000596250 PPP1R15AO75807 674 aaPredicted RBP20.05■□□□□ 0.8
SOX2-OT-225ENST00000596250 HDGFP51858 240 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-225ENST00000596250 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
SOX2-OT-225ENST00000596250 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.05■□□□□ 0.8
SOX2-OT-225ENST00000596250 CERKQ8TCT0 537 aa20.04■□□□□ 0.8
SOX2-OT-225ENST00000596250 NEXMIFQ5QGS0 1516 aa20.02■□□□□ 0.8
SOX2-OT-225ENST00000596250 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
SOX2-OT-225ENST00000596250 ANKRD30BQ9BXX2 1392 aa20.02■□□□□ 0.8
SOX2-OT-225ENST00000596250 SPATA31E1Q6ZUB1 1445 aa20.02■□□□□ 0.79
SOX2-OT-225ENST00000596250 KIF1BO60333 1816 aa20■□□□□ 0.79
SOX2-OT-225ENST00000596250 BCANQ96GW7 911 aa19.99■□□□□ 0.79
SOX2-OT-225ENST00000596250 ADAMTS13Q76LX8 1427 aa19.98■□□□□ 0.79
SOX2-OT-225ENST00000596250 RPGRIP1LQ68CZ1 1315 aa19.97■□□□□ 0.79
SOX2-OT-225ENST00000596250 CPS1P31327 1500 aa19.97■□□□□ 0.79
SOX2-OT-225ENST00000596250 RGL3Q3MIN7 710 aa19.95■□□□□ 0.78
SOX2-OT-225ENST00000596250 STRCP1A6NGW2 1772 aa19.95■□□□□ 0.78
SOX2-OT-225ENST00000596250 SETBP1Q9Y6X0 1596 aa19.95■□□□□ 0.78
SOX2-OT-225ENST00000596250 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
SOX2-OT-225ENST00000596250 NRXN3Q9Y4C0 1643 aa19.94■□□□□ 0.78
SOX2-OT-225ENST00000596250 DIP2AQ14689 1571 aa19.93■□□□□ 0.78
SOX2-OT-225ENST00000596250 IQSEC2Q5JU85 1478 aa19.92■□□□□ 0.78
SOX2-OT-225ENST00000596250 VGFO15240 615 aaPredicted RBP19.91■□□□□ 0.78
SOX2-OT-225ENST00000596250 KCNA6P17658 529 aa19.91■□□□□ 0.78
SOX2-OT-225ENST00000596250 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
SOX2-OT-225ENST00000596250 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
SOX2-OT-225ENST00000596250 PPLO60437 1756 aa19.9■□□□□ 0.78
SOX2-OT-225ENST00000596250 FBXO41Q8TF61 875 aa19.89■□□□□ 0.77
SOX2-OT-225ENST00000596250 DHX57Q6P158 1386 aaKnown RBP19.88■□□□□ 0.77
SOX2-OT-225ENST00000596250 ADGRF5Q8IZF2 1346 aa19.88■□□□□ 0.77
SOX2-OT-225ENST00000596250 ILDR1Q86SU0 546 aaPredicted RBP19.87■□□□□ 0.77
SOX2-OT-225ENST00000596250 NKTRP30414 1462 aaKnown RBP19.86■□□□□ 0.77
SOX2-OT-225ENST00000596250 PTPRUQ92729 1446 aa19.86■□□□□ 0.77
SOX2-OT-225ENST00000596250 METP08581 1390 aa19.86■□□□□ 0.77
SOX2-OT-225ENST00000596250 PIK3R4Q99570 1358 aa19.86■□□□□ 0.77
SOX2-OT-225ENST00000596250 IFT172Q9UG01 1749 aa19.86■□□□□ 0.77
SOX2-OT-225ENST00000596250 CCER1Q8TC90 406 aaPredicted RBP19.84■□□□□ 0.77
SOX2-OT-225ENST00000596250 MYOM2P54296 1465 aa19.83■□□□□ 0.76
SOX2-OT-225ENST00000596250 ALKQ9UM73 1620 aa19.83■□□□□ 0.76
SOX2-OT-225ENST00000596250 TMEM94Q12767 1356 aa19.83■□□□□ 0.76
SOX2-OT-225ENST00000596250 CHD2O14647 1828 aaKnown RBP19.82■□□□□ 0.76
SOX2-OT-225ENST00000596250 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
SOX2-OT-225ENST00000596250 NRXN1Q9ULB1 1477 aa19.81■□□□□ 0.76
SOX2-OT-225ENST00000596250 PROSER2Q86WR7 435 aaPredicted RBP19.81■□□□□ 0.76
SOX2-OT-225ENST00000596250 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-225ENST00000596250 AMOTL2Q9Y2J4 779 aa19.81■□□□□ 0.76
SOX2-OT-225ENST00000596250 SETD1AO15047 1707 aaKnown RBP19.81■□□□□ 0.76
SOX2-OT-225ENST00000596250 XRN1Q8IZH2 1706 aaKnown RBP19.79■□□□□ 0.76
SOX2-OT-225ENST00000596250 UBAP1LF5GYI3 381 aa19.78■□□□□ 0.76
SOX2-OT-225ENST00000596250 DCAF11Q8TEB1 546 aa19.77■□□□□ 0.76
SOX2-OT-225ENST00000596250 SIN3AQ96ST3 1273 aa19.77■□□□□ 0.76
SOX2-OT-225ENST00000596250 XIRP1Q702N8 1843 aaKnown RBP19.76■□□□□ 0.75
SOX2-OT-225ENST00000596250 ASXL1Q8IXJ9 1541 aa19.76■□□□□ 0.75
SOX2-OT-225ENST00000596250 KDM2AQ9Y2K7 1162 aa19.75■□□□□ 0.75
SOX2-OT-225ENST00000596250 C14orf93Q9H972 538 aaKnown RBP19.73■□□□□ 0.75
SOX2-OT-225ENST00000596250 PRAG1Q86YV5 1406 aa19.73■□□□□ 0.75
SOX2-OT-225ENST00000596250 CLSPNQ9HAW4 1339 aa19.73■□□□□ 0.75
SOX2-OT-225ENST00000596250 TOM1O60784 492 aa19.72■□□□□ 0.75
SOX2-OT-225ENST00000596250 CFAP70Q5T0N1 1121 aa19.72■□□□□ 0.75
SOX2-OT-225ENST00000596250 NCOA3Q9Y6Q9 1424 aa19.72■□□□□ 0.75
SOX2-OT-225ENST00000596250 PTCH1Q13635 1447 aa19.71■□□□□ 0.75
SOX2-OT-225ENST00000596250 TMEM132EQ6IEE7 984 aa19.71■□□□□ 0.75
SOX2-OT-225ENST00000596250 STAC3Q96MF2 364 aa19.71■□□□□ 0.75
SOX2-OT-225ENST00000596250 ROBO2Q9HCK4 1378 aa19.7■□□□□ 0.74
SOX2-OT-225ENST00000596250 NEUROD1Q13562 356 aa19.7■□□□□ 0.74
SOX2-OT-225ENST00000596250 MSH6P52701 1360 aa19.7■□□□□ 0.74
SOX2-OT-225ENST00000596250 LRPPRCP42704 1394 aaKnown RBP19.69■□□□□ 0.74
SOX2-OT-225ENST00000596250 PIP4K2BP78356 416 aa19.68■□□□□ 0.74
SOX2-OT-225ENST00000596250 LAMC1P11047 1609 aa19.68■□□□□ 0.74
SOX2-OT-225ENST00000596250 TECPR2O15040 1411 aa19.68■□□□□ 0.74
SOX2-OT-225ENST00000596250 L3MBTL2Q969R5 705 aa19.67■□□□□ 0.74
SOX2-OT-225ENST00000596250 YTHDC2Q9H6S0 1430 aaKnown RBP19.67■□□□□ 0.74
SOX2-OT-225ENST00000596250 C14orf37Q86TY3 774 aa19.66■□□□□ 0.74
SOX2-OT-225ENST00000596250 STK26Q9P289 416 aa19.66■□□□□ 0.74
SOX2-OT-225ENST00000596250 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
SOX2-OT-225ENST00000596250 ABCC11Q96J66 1382 aa19.66■□□□□ 0.74
SOX2-OT-225ENST00000596250 ADGRB1O14514 1584 aa19.66■□□□□ 0.74
SOX2-OT-225ENST00000596250 C19orf44Q9H6X5 657 aa19.65■□□□□ 0.74
SOX2-OT-225ENST00000596250 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
SOX2-OT-225ENST00000596250 DCCP43146 1447 aa19.61■□□□□ 0.73
SOX2-OT-225ENST00000596250 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
SOX2-OT-225ENST00000596250 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.61■□□□□ 0.73
SOX2-OT-225ENST00000596250 PLEKHH1Q9ULM0 1364 aa19.6■□□□□ 0.73
SOX2-OT-225ENST00000596250 NALCNQ8IZF0 1738 aa19.6■□□□□ 0.73
SOX2-OT-225ENST00000596250 WAPLQ7Z5K2 1190 aa19.6■□□□□ 0.73
SOX2-OT-225ENST00000596250 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
SOX2-OT-225ENST00000596250 ATF3P18847 181 aa19.59■□□□□ 0.73
SOX2-OT-225ENST00000596250 SLAIN2Q9P270 581 aa19.59■□□□□ 0.73
SOX2-OT-225ENST00000596250 FAM135BQ49AJ0 1406 aa19.59■□□□□ 0.73
SOX2-OT-225ENST00000596250 TONSLQ96HA7 1378 aa19.57■□□□□ 0.72
SOX2-OT-225ENST00000596250 DLC1Q96QB1 1528 aa19.56■□□□□ 0.72
SOX2-OT-225ENST00000596250 SIRT1Q96EB6 747 aa19.56■□□□□ 0.72
SOX2-OT-225ENST00000596250 HSPA1LP34931 641 aa19.55■□□□□ 0.72
SOX2-OT-225ENST00000596250 MST1RQ04912 1400 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms