RNA–Protein interactions for RNA: ENST00000596161.5

CCDC61-205, Transcript of coiled-coil domain containing 61, humanhuman

TSL 4

Gene CCDC61, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-205ENST00000596161 NPHP4O75161 1426 aaPredicted RBP29.39■■■□□ 2.3
CCDC61-205ENST00000596161 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.39■■■□□ 2.3
CCDC61-205ENST00000596161 ZFYVE9O95405 1425 aa29.38■■■□□ 2.29
CCDC61-205ENST00000596161 LTKP29376 864 aa29.38■■■□□ 2.29
CCDC61-205ENST00000596161 ZNF326Q5BKZ1 582 aaKnown RBP29.38■■■□□ 2.29
CCDC61-205ENST00000596161 PPP1R15AO75807 674 aaPredicted RBP29.34■■■□□ 2.29
CCDC61-205ENST00000596161 IQGAP1P46940 1657 aa29.34■■■□□ 2.29
CCDC61-205ENST00000596161 RPGRIP1LQ68CZ1 1315 aa29.3■■■□□ 2.28
CCDC61-205ENST00000596161 DHX57Q6P158 1386 aaKnown RBP29.29■■■□□ 2.28
CCDC61-205ENST00000596161 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
CCDC61-205ENST00000596161 PLEKHG1Q9ULL1 1385 aa29.28■■■□□ 2.28
CCDC61-205ENST00000596161 NEXMIFQ5QGS0 1516 aa29.27■■■□□ 2.28
CCDC61-205ENST00000596161 BCANQ96GW7 911 aa29.25■■■□□ 2.27
CCDC61-205ENST00000596161 RGL3Q3MIN7 710 aa29.24■■■□□ 2.27
CCDC61-205ENST00000596161 NUTM2DQ5VT03 806 aaPredicted RBP29.24■■■□□ 2.27
CCDC61-205ENST00000596161 VGFO15240 615 aaPredicted RBP29.21■■■□□ 2.27
CCDC61-205ENST00000596161 PPLO60437 1756 aa29.19■■■□□ 2.26
CCDC61-205ENST00000596161 SLC26A8Q96RN1 970 aa29.16■■■□□ 2.26
CCDC61-205ENST00000596161 ZNF335Q9H4Z2 1342 aaPredicted RBP29.16■■■□□ 2.26
CCDC61-205ENST00000596161 DIP2AQ14689 1571 aa29.15■■■□□ 2.26
CCDC61-205ENST00000596161 IFT172Q9UG01 1749 aa29.14■■■□□ 2.26
CCDC61-205ENST00000596161 SETBP1Q9Y6X0 1596 aa29.14■■■□□ 2.26
CCDC61-205ENST00000596161 SENP3Q9H4L4 574 aaPredicted RBP29.13■■■□□ 2.25
CCDC61-205ENST00000596161 TBX22Q9Y458 520 aa29.13■■■□□ 2.25
CCDC61-205ENST00000596161 ADAMTS13Q76LX8 1427 aa29.11■■■□□ 2.25
CCDC61-205ENST00000596161 LTBP4Q8N2S1 1624 aa29.1■■■□□ 2.25
CCDC61-205ENST00000596161 MYOM2P54296 1465 aa29.08■■■□□ 2.25
CCDC61-205ENST00000596161 NRXN3Q9Y4C0 1643 aa29.08■■■□□ 2.25
CCDC61-205ENST00000596161 CPS1P31327 1500 aa29.07■■■□□ 2.24
CCDC61-205ENST00000596161 STAC3Q96MF2 364 aa29.07■■■□□ 2.24
CCDC61-205ENST00000596161 PIK3R4Q99570 1358 aa29.06■■■□□ 2.24
CCDC61-205ENST00000596161 ADGRF5Q8IZF2 1346 aa29.06■■■□□ 2.24
CCDC61-205ENST00000596161 SIN3AQ96ST3 1273 aa29.04■■■□□ 2.24
CCDC61-205ENST00000596161 KCNA6P17658 529 aa29.03■■■□□ 2.24
CCDC61-205ENST00000596161 DCAF11Q8TEB1 546 aa29.03■■■□□ 2.24
CCDC61-205ENST00000596161 NEUROD1Q13562 356 aa29.02■■■□□ 2.24
CCDC61-205ENST00000596161 NWD1Q149M9 1564 aa29.01■■■□□ 2.23
CCDC61-205ENST00000596161 NRXN1Q9ULB1 1477 aa29■■■□□ 2.23
CCDC61-205ENST00000596161 CERKQ8TCT0 537 aa29■■■□□ 2.23
CCDC61-205ENST00000596161 ALKQ9UM73 1620 aa29■■■□□ 2.23
CCDC61-205ENST00000596161 PIK3C2GO75747 1445 aa29■■■□□ 2.23
CCDC61-205ENST00000596161 STRCP1A6NGW2 1772 aa28.98■■■□□ 2.23
CCDC61-205ENST00000596161 KDM2AQ9Y2K7 1162 aa28.98■■■□□ 2.23
CCDC61-205ENST00000596161 CHD2O14647 1828 aaKnown RBP28.97■■■□□ 2.23
CCDC61-205ENST00000596161 NKTRP30414 1462 aaKnown RBP28.97■■■□□ 2.23
CCDC61-205ENST00000596161 CLSPNQ9HAW4 1339 aa28.96■■■□□ 2.23
CCDC61-205ENST00000596161 IQSEC2Q5JU85 1478 aa28.96■■■□□ 2.23
CCDC61-205ENST00000596161 METP08581 1390 aa28.95■■■□□ 2.22
CCDC61-205ENST00000596161 SETD1AO15047 1707 aaKnown RBP28.94■■■□□ 2.22
CCDC61-205ENST00000596161 LAMC1P11047 1609 aa28.94■■■□□ 2.22
CCDC61-205ENST00000596161 LRRC7Q96NW7 1537 aa28.92■■■□□ 2.22
CCDC61-205ENST00000596161 CCER1Q8TC90 406 aaPredicted RBP28.91■■■□□ 2.22
CCDC61-205ENST00000596161 L3MBTL2Q969R5 705 aa28.91■■■□□ 2.22
CCDC61-205ENST00000596161 AMOTL2Q9Y2J4 779 aa28.91■■■□□ 2.22
CCDC61-205ENST00000596161 PTPRUQ92729 1446 aa28.91■■■□□ 2.22
CCDC61-205ENST00000596161 C14orf93Q9H972 538 aaKnown RBP28.9■■■□□ 2.22
CCDC61-205ENST00000596161 PROSER2Q86WR7 435 aaPredicted RBP28.89■■■□□ 2.22
CCDC61-205ENST00000596161 TONSLQ96HA7 1378 aa28.88■■■□□ 2.21
CCDC61-205ENST00000596161 XRN1Q8IZH2 1706 aaKnown RBP28.88■■■□□ 2.21
CCDC61-205ENST00000596161 CFAP70Q5T0N1 1121 aa28.86■■■□□ 2.21
CCDC61-205ENST00000596161 TMEM94Q12767 1356 aa28.84■■■□□ 2.21
CCDC61-205ENST00000596161 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.21
CCDC61-205ENST00000596161 ASXL1Q8IXJ9 1541 aa28.83■■■□□ 2.21
CCDC61-205ENST00000596161 LRPPRCP42704 1394 aaKnown RBP28.81■■■□□ 2.2
CCDC61-205ENST00000596161 NCOA3Q9Y6Q9 1424 aa28.8■■■□□ 2.2
CCDC61-205ENST00000596161 TMEM132EQ6IEE7 984 aa28.8■■■□□ 2.2
CCDC61-205ENST00000596161 PTCH1Q13635 1447 aa28.79■■■□□ 2.2
CCDC61-205ENST00000596161 YTHDC2Q9H6S0 1430 aaKnown RBP28.78■■■□□ 2.2
CCDC61-205ENST00000596161 KIAA1210Q9ULL0 1709 aa28.78■■■□□ 2.2
CCDC61-205ENST00000596161 ABCC11Q96J66 1382 aa28.77■■■□□ 2.2
CCDC61-205ENST00000596161 XIRP1Q702N8 1843 aaKnown RBP28.76■■■□□ 2.19
CCDC61-205ENST00000596161 STK26Q9P289 416 aa28.76■■■□□ 2.19
CCDC61-205ENST00000596161 TECPR2O15040 1411 aa28.76■■■□□ 2.19
CCDC61-205ENST00000596161 ADGRB1O14514 1584 aa28.75■■■□□ 2.19
CCDC61-205ENST00000596161 KNDC1Q76NI1 1749 aa28.74■■■□□ 2.19
CCDC61-205ENST00000596161 C14orf37Q86TY3 774 aa28.74■■■□□ 2.19
CCDC61-205ENST00000596161 RBM33Q96EV2 1170 aaKnown RBP28.74■■■□□ 2.19
CCDC61-205ENST00000596161 TIMELESSQ9UNS1 1208 aa28.74■■■□□ 2.19
CCDC61-205ENST00000596161 MSH6P52701 1360 aa28.73■■■□□ 2.19
CCDC61-205ENST00000596161 ROBO2Q9HCK4 1378 aa28.73■■■□□ 2.19
CCDC61-205ENST00000596161 FBXO41Q8TF61 875 aa28.72■■■□□ 2.19
CCDC61-205ENST00000596161 UBAP1LF5GYI3 381 aa28.7■■■□□ 2.18
CCDC61-205ENST00000596161 TOM1O60784 492 aa28.7■■■□□ 2.18
CCDC61-205ENST00000596161 SIRT1Q96EB6 747 aa28.69■■■□□ 2.18
CCDC61-205ENST00000596161 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
CCDC61-205ENST00000596161 C19orf44Q9H6X5 657 aa28.67■■■□□ 2.18
CCDC61-205ENST00000596161 DLC1Q96QB1 1528 aa28.67■■■□□ 2.18
CCDC61-205ENST00000596161 TRPM1Q7Z4N2 1603 aa28.66■■■□□ 2.18
CCDC61-205ENST00000596161 ADGRL3Q9HAR2 1447 aa28.66■■■□□ 2.18
CCDC61-205ENST00000596161 DCCP43146 1447 aa28.63■■■□□ 2.17
CCDC61-205ENST00000596161 NBPF1Q3BBV0 1214 aa28.63■■■□□ 2.17
CCDC61-205ENST00000596161 NBPF8Q3BBV2 869 aa28.63■■■□□ 2.17
CCDC61-205ENST00000596161 TRAK1Q9UPV9 953 aa28.63■■■□□ 2.17
CCDC61-205ENST00000596161 ATF3P18847 181 aa28.61■■■□□ 2.17
CCDC61-205ENST00000596161 WAPLQ7Z5K2 1190 aa28.61■■■□□ 2.17
CCDC61-205ENST00000596161 CADPS2Q86UW7 1296 aa28.61■■■□□ 2.17
CCDC61-205ENST00000596161 ROCK2O75116 1388 aaKnown RBP28.61■■■□□ 2.17
CCDC61-205ENST00000596161 NALCNQ8IZF0 1738 aa28.6■■■□□ 2.17
CCDC61-205ENST00000596161 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.6■■■□□ 2.17
CCDC61-205ENST00000596161 PRAM1Q96QH2 718 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms