RNA–Protein interactions for RNA: ENST00000595081.5

PNKP-205, Transcript of polynucleotide kinase 3'-phosphatase, human

TSL 2

Gene PNKP, Length 513 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PNKP-205	ENST00000595081	MED14	O60244	1454 aa		33.63	■■■□□ 2.97
PNKP-205	ENST00000595081	NPHP4	O75161	1426 aa	Predicted RBP	33.63	■■■□□ 2.97
PNKP-205	ENST00000595081	ZNF326	Q5BKZ1	582 aa	Known RBP	33.63	■■■□□ 2.97
PNKP-205	ENST00000595081	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.6	■■■□□ 2.97
PNKP-205	ENST00000595081	IQGAP1	P46940	1657 aa		33.58	■■■□□ 2.97
PNKP-205	ENST00000595081	PPP1R15A	O75807	674 aa	Predicted RBP	33.56	■■■□□ 2.96
PNKP-205	ENST00000595081	SENP3	Q9H4L4	574 aa	Predicted RBP	33.56	■■■□□ 2.96
PNKP-205	ENST00000595081	HDGF	P51858	240 aa	Known RBP	33.55	■■■□□ 2.96
PNKP-205	ENST00000595081	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.55	■■■□□ 2.96
PNKP-205	ENST00000595081	DHX57	Q6P158	1386 aa	Known RBP	33.55	■■■□□ 2.96
PNKP-205	ENST00000595081	SPATA31E1	Q6ZUB1	1445 aa		33.54	■■■□□ 2.96
PNKP-205	ENST00000595081	RGL3	Q3MIN7	710 aa		33.52	■■■□□ 2.96
PNKP-205	ENST00000595081	NEXMIF	Q5QGS0	1516 aa		33.52	■■■□□ 2.96
PNKP-205	ENST00000595081	PLEKHG1	Q9ULL1	1385 aa		33.49	■■■□□ 2.95
PNKP-205	ENST00000595081	BCAN	Q96GW7	911 aa		33.48	■■■□□ 2.95
PNKP-205	ENST00000595081	RPGRIP1L	Q68CZ1	1315 aa		33.45	■■■□□ 2.95
PNKP-205	ENST00000595081	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	33.45	■■■□□ 2.95
PNKP-205	ENST00000595081	SLC26A8	Q96RN1	970 aa		33.44	■■■□□ 2.94
PNKP-205	ENST00000595081	PPL	O60437	1756 aa		33.4	■■■□□ 2.94
PNKP-205	ENST00000595081	VGF	O15240	615 aa	Predicted RBP	33.37	■■■□□ 2.93
PNKP-205	ENST00000595081	ADAMTS13	Q76LX8	1427 aa		33.36	■■■□□ 2.93
PNKP-205	ENST00000595081	LTBP4	Q8N2S1	1624 aa		33.35	■■■□□ 2.93
PNKP-205	ENST00000595081	IFT172	Q9UG01	1749 aa		33.34	■■■□□ 2.93
PNKP-205	ENST00000595081	SIN3A	Q96ST3	1273 aa		33.34	■■■□□ 2.93
PNKP-205	ENST00000595081	SETBP1	Q9Y6X0	1596 aa		33.34	■■■□□ 2.93
PNKP-205	ENST00000595081	NRXN3	Q9Y4C0	1643 aa		33.33	■■■□□ 2.93
PNKP-205	ENST00000595081	ADGRF5	Q8IZF2	1346 aa		33.32	■■■□□ 2.93
PNKP-205	ENST00000595081	TBX22	Q9Y458	520 aa		33.3	■■■□□ 2.92
PNKP-205	ENST00000595081	DIP2A	Q14689	1571 aa		33.28	■■■□□ 2.92
PNKP-205	ENST00000595081	NEUROD1	Q13562	356 aa		33.27	■■■□□ 2.92
PNKP-205	ENST00000595081	STRCP1	A6NGW2	1772 aa		33.26	■■■□□ 2.92
PNKP-205	ENST00000595081	DCAF11	Q8TEB1	546 aa		33.24	■■■□□ 2.91
PNKP-205	ENST00000595081	MYOM2	P54296	1465 aa		33.24	■■■□□ 2.91
PNKP-205	ENST00000595081	CERK	Q8TCT0	537 aa		33.22	■■■□□ 2.91
PNKP-205	ENST00000595081	KDM2A	Q9Y2K7	1162 aa		33.22	■■■□□ 2.91
PNKP-205	ENST00000595081	KCNA6	P17658	529 aa		33.21	■■■□□ 2.91
PNKP-205	ENST00000595081	CPS1	P31327	1500 aa		33.21	■■■□□ 2.91
PNKP-205	ENST00000595081	MET	P08581	1390 aa		33.21	■■■□□ 2.91
PNKP-205	ENST00000595081	PIK3C2G	O75747	1445 aa		33.2	■■■□□ 2.91
PNKP-205	ENST00000595081	ALK	Q9UM73	1620 aa		33.2	■■■□□ 2.9
PNKP-205	ENST00000595081	NRXN1	Q9ULB1	1477 aa		33.18	■■■□□ 2.9
PNKP-205	ENST00000595081	NWD1	Q149M9	1564 aa		33.17	■■■□□ 2.9
PNKP-205	ENST00000595081	PIK3R4	Q99570	1358 aa		33.17	■■■□□ 2.9
PNKP-205	ENST00000595081	PTPRU	Q92729	1446 aa		33.16	■■■□□ 2.9
PNKP-205	ENST00000595081	SETD1A	O15047	1707 aa	Known RBP	33.16	■■■□□ 2.9
PNKP-205	ENST00000595081	CHD2	O14647	1828 aa	Known RBP	33.16	■■■□□ 2.9
PNKP-205	ENST00000595081	LRRC7	Q96NW7	1537 aa		33.13	■■■□□ 2.89
PNKP-205	ENST00000595081	L3MBTL2	Q969R5	705 aa		33.12	■■■□□ 2.89
PNKP-205	ENST00000595081	AMOTL2	Q9Y2J4	779 aa		33.11	■■■□□ 2.89
PNKP-205	ENST00000595081	STAC3	Q96MF2	364 aa		33.1	■■■□□ 2.89
PNKP-205	ENST00000595081	NKTR	P30414	1462 aa	Known RBP	33.1	■■■□□ 2.89
PNKP-205	ENST00000595081	CFAP70	Q5T0N1	1121 aa		33.09	■■■□□ 2.89
PNKP-205	ENST00000595081	C14orf93	Q9H972	538 aa	Known RBP	33.08	■■■□□ 2.89
PNKP-205	ENST00000595081	PROSER2	Q86WR7	435 aa	Predicted RBP	33.07	■■■□□ 2.88
PNKP-205	ENST00000595081	RBM33	Q96EV2	1170 aa	Known RBP	33.07	■■■□□ 2.88
PNKP-205	ENST00000595081	XRN1	Q8IZH2	1706 aa	Known RBP	33.06	■■■□□ 2.88
PNKP-205	ENST00000595081	CCER1	Q8TC90	406 aa	Predicted RBP	33.06	■■■□□ 2.88
PNKP-205	ENST00000595081	ASXL1	Q8IXJ9	1541 aa		33.06	■■■□□ 2.88
PNKP-205	ENST00000595081	TMEM132E	Q6IEE7	984 aa		33.05	■■■□□ 2.88
PNKP-205	ENST00000595081	TMEM94	Q12767	1356 aa		33.04	■■■□□ 2.88
PNKP-205	ENST00000595081	IQSEC2	Q5JU85	1478 aa		33.03	■■■□□ 2.88
PNKP-205	ENST00000595081	LAMC1	P11047	1609 aa		33.02	■■■□□ 2.88
PNKP-205	ENST00000595081	TONSL	Q96HA7	1378 aa		33.01	■■■□□ 2.88
PNKP-205	ENST00000595081	CLSPN	Q9HAW4	1339 aa		33.01	■■■□□ 2.87
PNKP-205	ENST00000595081	PRAG1	Q86YV5	1406 aa		33	■■■□□ 2.87
PNKP-205	ENST00000595081	XIRP1	Q702N8	1843 aa	Known RBP	32.99	■■■□□ 2.87
PNKP-205	ENST00000595081	STK26	Q9P289	416 aa		32.98	■■■□□ 2.87
PNKP-205	ENST00000595081	LRPPRC	P42704	1394 aa	Known RBP	32.95	■■■□□ 2.86
PNKP-205	ENST00000595081	ROBO2	Q9HCK4	1378 aa		32.95	■■■□□ 2.86
PNKP-205	ENST00000595081	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.94	■■■□□ 2.86
PNKP-205	ENST00000595081	ADGRB1	O14514	1584 aa		32.93	■■■□□ 2.86
PNKP-205	ENST00000595081	PTCH1	Q13635	1447 aa		32.92	■■■□□ 2.86
PNKP-205	ENST00000595081	ABCC11	Q96J66	1382 aa		32.89	■■■□□ 2.86
PNKP-205	ENST00000595081	C14orf37	Q86TY3	774 aa		32.89	■■■□□ 2.86
PNKP-205	ENST00000595081	TECPR2	O15040	1411 aa		32.88	■■■□□ 2.85
PNKP-205	ENST00000595081	UBAP1L	F5GYI3	381 aa		32.88	■■■□□ 2.85
PNKP-205	ENST00000595081	NBPF1	Q3BBV0	1214 aa		32.86	■■■□□ 2.85
PNKP-205	ENST00000595081	FBXO41	Q8TF61	875 aa		32.86	■■■□□ 2.85
PNKP-205	ENST00000595081	NCOA3	Q9Y6Q9	1424 aa		32.85	■■■□□ 2.85
PNKP-205	ENST00000595081	KNDC1	Q76NI1	1749 aa		32.85	■■■□□ 2.85
PNKP-205	ENST00000595081	KIAA1210	Q9ULL0	1709 aa		32.85	■■■□□ 2.85
PNKP-205	ENST00000595081	NBPF8	Q3BBV2	869 aa		32.85	■■■□□ 2.85
PNKP-205	ENST00000595081	MSH6	P52701	1360 aa		32.84	■■■□□ 2.85
PNKP-205	ENST00000595081	WAPL	Q7Z5K2	1190 aa		32.82	■■■□□ 2.84
PNKP-205	ENST00000595081	PLEKHH1	Q9ULM0	1364 aa		32.81	■■■□□ 2.84
PNKP-205	ENST00000595081	TRAK1	Q9UPV9	953 aa		32.8	■■■□□ 2.84
PNKP-205	ENST00000595081	TOM1	O60784	492 aa		32.79	■■■□□ 2.84
PNKP-205	ENST00000595081	TRPM1	Q7Z4N2	1603 aa		32.79	■■■□□ 2.84
PNKP-205	ENST00000595081	C19orf44	Q9H6X5	657 aa		32.78	■■■□□ 2.84
PNKP-205	ENST00000595081	ADGRL3	Q9HAR2	1447 aa		32.77	■■■□□ 2.84
PNKP-205	ENST00000595081	NALCN	Q8IZF0	1738 aa		32.77	■■■□□ 2.84
PNKP-205	ENST00000595081	FAM135B	Q49AJ0	1406 aa		32.77	■■■□□ 2.84
PNKP-205	ENST00000595081	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.76	■■■□□ 2.83
PNKP-205	ENST00000595081	DLC1	Q96QB1	1528 aa		32.76	■■■□□ 2.83
PNKP-205	ENST00000595081	PIP4K2B	P78356	416 aa		32.75	■■■□□ 2.83
PNKP-205	ENST00000595081	SIRT1	Q96EB6	747 aa		32.75	■■■□□ 2.83
PNKP-205	ENST00000595081	PRAM1	Q96QH2	718 aa		32.75	■■■□□ 2.83
PNKP-205	ENST00000595081	TIMELESS	Q9UNS1	1208 aa		32.73	■■■□□ 2.83
PNKP-205	ENST00000595081	SCAF1	Q9H7N4	1312 aa	Known RBP	32.73	■■■□□ 2.83
PNKP-205	ENST00000595081	ROCK2	O75116	1388 aa	Known RBP	32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms