RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 ZFYVE9O95405 1425 aa22.12■■□□□ 1.13
USE1-205ENST00000594724 PPP1R15AO75807 674 aaPredicted RBP22.11■■□□□ 1.13
USE1-205ENST00000594724 HDGFP51858 240 aaKnown RBP22.11■■□□□ 1.13
USE1-205ENST00000594724 STRCP1A6NGW2 1772 aa22.11■■□□□ 1.13
USE1-205ENST00000594724 SPHKAPQ2M3C7 1700 aa22.09■■□□□ 1.13
USE1-205ENST00000594724 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.08■■□□□ 1.13
USE1-205ENST00000594724 LRRC7Q96NW7 1537 aa22.06■■□□□ 1.12
USE1-205ENST00000594724 PLEKHG1Q9ULL1 1385 aa22.06■■□□□ 1.12
USE1-205ENST00000594724 FOXD1Q16676 465 aa22.05■■□□□ 1.12
USE1-205ENST00000594724 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
USE1-205ENST00000594724 KCNA6P17658 529 aa22.03■■□□□ 1.12
USE1-205ENST00000594724 CLTCL1P53675 1640 aa22.02■■□□□ 1.12
USE1-205ENST00000594724 TRPM2O94759 1503 aa22.02■■□□□ 1.12
USE1-205ENST00000594724 TOM1O60784 492 aa22.02■■□□□ 1.12
USE1-205ENST00000594724 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
USE1-205ENST00000594724 SETD5Q9C0A6 1442 aa22.02■■□□□ 1.12
USE1-205ENST00000594724 SCAF1Q9H7N4 1312 aaKnown RBP22.02■■□□□ 1.12
USE1-205ENST00000594724 MPHOSPH9Q99550 1183 aa22.01■■□□□ 1.11
USE1-205ENST00000594724 TBX22Q9Y458 520 aa21.99■■□□□ 1.11
USE1-205ENST00000594724 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
USE1-205ENST00000594724 RBM33Q96EV2 1170 aaKnown RBP21.98■■□□□ 1.11
USE1-205ENST00000594724 ADAMTS13Q76LX8 1427 aa21.97■■□□□ 1.11
USE1-205ENST00000594724 RAB3GAP2Q9H2M9 1393 aa21.95■■□□□ 1.1
USE1-205ENST00000594724 TMEM94Q12767 1356 aa21.94■■□□□ 1.1
USE1-205ENST00000594724 ALKQ9UM73 1620 aa21.93■■□□□ 1.1
USE1-205ENST00000594724 KIF1BO60333 1816 aa21.92■■□□□ 1.1
USE1-205ENST00000594724 XIRP1Q702N8 1843 aaKnown RBP21.92■■□□□ 1.1
USE1-205ENST00000594724 NWD1Q149M9 1564 aa21.91■■□□□ 1.1
USE1-205ENST00000594724 ACIN1Q9UKV3 1341 aaKnown RBP21.9■■□□□ 1.1
USE1-205ENST00000594724 NEXMIFQ5QGS0 1516 aa21.9■■□□□ 1.1
USE1-205ENST00000594724 CHD2O14647 1828 aaKnown RBP21.9■■□□□ 1.1
USE1-205ENST00000594724 HSPA1LP34931 641 aa21.89■■□□□ 1.09
USE1-205ENST00000594724 NKTRP30414 1462 aaKnown RBP21.89■■□□□ 1.09
USE1-205ENST00000594724 DIP2AQ14689 1571 aa21.87■■□□□ 1.09
USE1-205ENST00000594724 AMOTL2Q9Y2J4 779 aa21.87■■□□□ 1.09
USE1-205ENST00000594724 CCDC144AA2RUR9 1427 aa21.87■■□□□ 1.09
USE1-205ENST00000594724 PIK3R4Q99570 1358 aa21.87■■□□□ 1.09
USE1-205ENST00000594724 VGFO15240 615 aaPredicted RBP21.86■■□□□ 1.09
USE1-205ENST00000594724 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
USE1-205ENST00000594724 PTPRUQ92729 1446 aa21.86■■□□□ 1.09
USE1-205ENST00000594724 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
USE1-205ENST00000594724 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
USE1-205ENST00000594724 SETBP1Q9Y6X0 1596 aa21.85■■□□□ 1.09
USE1-205ENST00000594724 METP08581 1390 aa21.83■■□□□ 1.08
USE1-205ENST00000594724 MSH6P52701 1360 aa21.81■■□□□ 1.08
USE1-205ENST00000594724 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
USE1-205ENST00000594724 HRCP23327 699 aa21.79■■□□□ 1.08
USE1-205ENST00000594724 SPATA31E1Q6ZUB1 1445 aa21.79■■□□□ 1.08
USE1-205ENST00000594724 ADGRF5Q8IZF2 1346 aa21.77■■□□□ 1.07
USE1-205ENST00000594724 PPLO60437 1756 aa21.76■■□□□ 1.07
USE1-205ENST00000594724 NCOA3Q9Y6Q9 1424 aa21.76■■□□□ 1.07
USE1-205ENST00000594724 FAM135BQ49AJ0 1406 aa21.74■■□□□ 1.07
USE1-205ENST00000594724 SLAIN2Q9P270 581 aa21.74■■□□□ 1.07
USE1-205ENST00000594724 DISP3Q9P2K9 1392 aa21.74■■□□□ 1.07
USE1-205ENST00000594724 XRN1Q8IZH2 1706 aaKnown RBP21.73■■□□□ 1.07
USE1-205ENST00000594724 C19orf44Q9H6X5 657 aa21.73■■□□□ 1.07
USE1-205ENST00000594724 ANKRD30BQ9BXX2 1392 aa21.72■■□□□ 1.07
USE1-205ENST00000594724 ATF3P18847 181 aa21.7■■□□□ 1.06
USE1-205ENST00000594724 CADPS2Q86UW7 1296 aa21.69■■□□□ 1.06
USE1-205ENST00000594724 SETD1AO15047 1707 aaKnown RBP21.69■■□□□ 1.06
USE1-205ENST00000594724 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
USE1-205ENST00000594724 ROBO1Q9Y6N7 1651 aa21.68■■□□□ 1.06
USE1-205ENST00000594724 IFT172Q9UG01 1749 aa21.66■■□□□ 1.06
USE1-205ENST00000594724 ROBO2Q9HCK4 1378 aa21.64■■□□□ 1.06
USE1-205ENST00000594724 TMEM132EQ6IEE7 984 aa21.64■■□□□ 1.05
USE1-205ENST00000594724 STK26Q9P289 416 aa21.63■■□□□ 1.05
USE1-205ENST00000594724 PIK3C2GO75747 1445 aa21.62■■□□□ 1.05
USE1-205ENST00000594724 PTCH1Q13635 1447 aa21.61■■□□□ 1.05
USE1-205ENST00000594724 ADGRL3Q9HAR2 1447 aa21.61■■□□□ 1.05
USE1-205ENST00000594724 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
USE1-205ENST00000594724 DCCP43146 1447 aa21.59■■□□□ 1.05
USE1-205ENST00000594724 CFAP70Q5T0N1 1121 aa21.59■■□□□ 1.05
USE1-205ENST00000594724 C14orf93Q9H972 538 aaKnown RBP21.59■■□□□ 1.05
USE1-205ENST00000594724 ILDR2Q71H61 639 aa21.58■■□□□ 1.05
USE1-205ENST00000594724 MED1Q15648 1581 aaPredicted RBP21.57■■□□□ 1.04
USE1-205ENST00000594724 BRINP3Q76B58 766 aa21.57■■□□□ 1.04
USE1-205ENST00000594724 DCAF11Q8TEB1 546 aa21.57■■□□□ 1.04
USE1-205ENST00000594724 NALCNQ8IZF0 1738 aa21.57■■□□□ 1.04
USE1-205ENST00000594724 MYOM2P54296 1465 aa21.57■■□□□ 1.04
USE1-205ENST00000594724 MST1RQ04912 1400 aa21.56■■□□□ 1.04
USE1-205ENST00000594724 PRAG1Q86YV5 1406 aa21.56■■□□□ 1.04
USE1-205ENST00000594724 ASXL1Q8IXJ9 1541 aa21.56■■□□□ 1.04
USE1-205ENST00000594724 WAPLQ7Z5K2 1190 aa21.56■■□□□ 1.04
USE1-205ENST00000594724 LRPPRCP42704 1394 aaKnown RBP21.56■■□□□ 1.04
USE1-205ENST00000594724 NRXN1Q9ULB1 1477 aa21.56■■□□□ 1.04
USE1-205ENST00000594724 PHLPP1O60346 1717 aa21.54■■□□□ 1.04
USE1-205ENST00000594724 ABCC11Q96J66 1382 aa21.53■■□□□ 1.04
USE1-205ENST00000594724 YTHDC2Q9H6S0 1430 aaKnown RBP21.53■■□□□ 1.04
USE1-205ENST00000594724 DHX57Q6P158 1386 aaKnown RBP21.51■■□□□ 1.03
USE1-205ENST00000594724 PLEKHH1Q9ULM0 1364 aa21.51■■□□□ 1.03
USE1-205ENST00000594724 TECPR2O15040 1411 aa21.51■■□□□ 1.03
USE1-205ENST00000594724 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
USE1-205ENST00000594724 PHF23Q9BUL5 403 aaPredicted RBP21.49■■□□□ 1.03
USE1-205ENST00000594724 COL16A1Q07092 1604 aaPredicted RBP21.48■■□□□ 1.03
USE1-205ENST00000594724 C1orf167Q5SNV9 1468 aa21.48■■□□□ 1.03
USE1-205ENST00000594724 JCADQ9P266 1359 aa21.48■■□□□ 1.03
USE1-205ENST00000594724 AHDC1Q5TGY3 1603 aaPredicted RBP21.47■■□□□ 1.03
USE1-205ENST00000594724 STAC3Q96MF2 364 aa21.47■■□□□ 1.03
USE1-205ENST00000594724 ORAI2Q96SN7 254 aa21.47■■□□□ 1.03
USE1-205ENST00000594724 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms