RNA–Protein interactions for RNA: ENST00000593959.1

SYMPK-204, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-204ENST00000593959 HDGFP51858 240 aaKnown RBP25.06■■□□□ 1.6
SYMPK-204ENST00000593959 SLC26A8Q96RN1 970 aa25.06■■□□□ 1.6
SYMPK-204ENST00000593959 NAIPQ13075 1403 aa25.05■■□□□ 1.6
SYMPK-204ENST00000593959 XIRP1Q702N8 1843 aaKnown RBP25.01■■□□□ 1.59
SYMPK-204ENST00000593959 MYO5BQ9ULV0 1848 aa25.01■■□□□ 1.59
SYMPK-204ENST00000593959 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.01■■□□□ 1.59
SYMPK-204ENST00000593959 NWD1Q149M9 1564 aa25.01■■□□□ 1.59
SYMPK-204ENST00000593959 SCAF1Q9H7N4 1312 aaKnown RBP25■■□□□ 1.59
SYMPK-204ENST00000593959 NKTRP30414 1462 aaKnown RBP24.99■■□□□ 1.59
SYMPK-204ENST00000593959 TMEM94Q12767 1356 aa24.99■■□□□ 1.59
SYMPK-204ENST00000593959 TBX22Q9Y458 520 aa24.99■■□□□ 1.59
SYMPK-204ENST00000593959 HFM1A2PYH4 1435 aa24.98■■□□□ 1.59
SYMPK-204ENST00000593959 ILDR2Q71H61 639 aa24.95■■□□□ 1.58
SYMPK-204ENST00000593959 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.58
SYMPK-204ENST00000593959 PPP1R15AO75807 674 aaPredicted RBP24.94■■□□□ 1.58
SYMPK-204ENST00000593959 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
SYMPK-204ENST00000593959 PROSER2Q86WR7 435 aaPredicted RBP24.93■■□□□ 1.58
SYMPK-204ENST00000593959 BCANQ96GW7 911 aa24.92■■□□□ 1.58
SYMPK-204ENST00000593959 FAM135BQ49AJ0 1406 aa24.91■■□□□ 1.58
SYMPK-204ENST00000593959 SPHKAPQ2M3C7 1700 aa24.91■■□□□ 1.58
SYMPK-204ENST00000593959 PIK3R4Q99570 1358 aa24.91■■□□□ 1.58
SYMPK-204ENST00000593959 CHD2O14647 1828 aaKnown RBP24.91■■□□□ 1.58
SYMPK-204ENST00000593959 DIP2AQ14689 1571 aa24.89■■□□□ 1.58
SYMPK-204ENST00000593959 NCOA3Q9Y6Q9 1424 aa24.87■■□□□ 1.57
SYMPK-204ENST00000593959 TRPM2O94759 1503 aa24.87■■□□□ 1.57
SYMPK-204ENST00000593959 NUTM2DQ5VT03 806 aaPredicted RBP24.86■■□□□ 1.57
SYMPK-204ENST00000593959 RBM33Q96EV2 1170 aaKnown RBP24.85■■□□□ 1.57
SYMPK-204ENST00000593959 SENP3Q9H4L4 574 aaPredicted RBP24.83■■□□□ 1.57
SYMPK-204ENST00000593959 MED1Q15648 1581 aaPredicted RBP24.82■■□□□ 1.56
SYMPK-204ENST00000593959 CLTCL1P53675 1640 aa24.82■■□□□ 1.56
SYMPK-204ENST00000593959 MSH6P52701 1360 aa24.81■■□□□ 1.56
SYMPK-204ENST00000593959 SETBP1Q9Y6X0 1596 aa24.81■■□□□ 1.56
SYMPK-204ENST00000593959 NRXN3Q9Y4C0 1643 aa24.79■■□□□ 1.56
SYMPK-204ENST00000593959 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
SYMPK-204ENST00000593959 SOCS7O14512 581 aa24.78■■□□□ 1.56
SYMPK-204ENST00000593959 TRIM52Q96A61 297 aa24.78■■□□□ 1.56
SYMPK-204ENST00000593959 SLAIN2Q9P270 581 aa24.78■■□□□ 1.56
SYMPK-204ENST00000593959 SLC4A1APQ9BWU0 796 aaKnown RBP24.77■■□□□ 1.56
SYMPK-204ENST00000593959 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
SYMPK-204ENST00000593959 ZNF326Q5BKZ1 582 aaKnown RBP24.76■■□□□ 1.55
SYMPK-204ENST00000593959 AMOTL2Q9Y2J4 779 aa24.76■■□□□ 1.55
SYMPK-204ENST00000593959 ROBO1Q9Y6N7 1651 aa24.73■■□□□ 1.55
SYMPK-204ENST00000593959 C19orf44Q9H6X5 657 aa24.73■■□□□ 1.55
SYMPK-204ENST00000593959 METP08581 1390 aa24.72■■□□□ 1.55
SYMPK-204ENST00000593959 RPGRIP1LQ68CZ1 1315 aa24.71■■□□□ 1.55
SYMPK-204ENST00000593959 XRN1Q8IZH2 1706 aaKnown RBP24.7■■□□□ 1.54
SYMPK-204ENST00000593959 KIF1BO60333 1816 aa24.7■■□□□ 1.54
SYMPK-204ENST00000593959 CADPS2Q86UW7 1296 aa24.68■■□□□ 1.54
SYMPK-204ENST00000593959 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
SYMPK-204ENST00000593959 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
SYMPK-204ENST00000593959 DCCP43146 1447 aa24.66■■□□□ 1.54
SYMPK-204ENST00000593959 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.66■■□□□ 1.54
SYMPK-204ENST00000593959 MPHOSPH9Q99550 1183 aa24.65■■□□□ 1.54
SYMPK-204ENST00000593959 ATF3P18847 181 aa24.63■■□□□ 1.53
SYMPK-204ENST00000593959 FOXD1Q16676 465 aa24.63■■□□□ 1.53
SYMPK-204ENST00000593959 C14orf37Q86TY3 774 aa24.63■■□□□ 1.53
SYMPK-204ENST00000593959 PRAG1Q86YV5 1406 aa24.61■■□□□ 1.53
SYMPK-204ENST00000593959 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
SYMPK-204ENST00000593959 PHF23Q9BUL5 403 aaPredicted RBP24.59■■□□□ 1.53
SYMPK-204ENST00000593959 SETD5Q9C0A6 1442 aa24.59■■□□□ 1.53
SYMPK-204ENST00000593959 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.53
SYMPK-204ENST00000593959 RGS17Q9UGC6 210 aaPredicted RBP24.58■■□□□ 1.53
SYMPK-204ENST00000593959 CCDC144AA2RUR9 1427 aa24.58■■□□□ 1.53
SYMPK-204ENST00000593959 PTCH1Q13635 1447 aa24.56■■□□□ 1.52
SYMPK-204ENST00000593959 ADGRL3Q9HAR2 1447 aa24.56■■□□□ 1.52
SYMPK-204ENST00000593959 PPLO60437 1756 aa24.56■■□□□ 1.52
SYMPK-204ENST00000593959 COL16A1Q07092 1604 aaPredicted RBP24.56■■□□□ 1.52
SYMPK-204ENST00000593959 JCADQ9P266 1359 aa24.55■■□□□ 1.52
SYMPK-204ENST00000593959 AHDC1Q5TGY3 1603 aaPredicted RBP24.55■■□□□ 1.52
SYMPK-204ENST00000593959 PHLPP1O60346 1717 aa24.55■■□□□ 1.52
SYMPK-204ENST00000593959 MST1RQ04912 1400 aa24.54■■□□□ 1.52
SYMPK-204ENST00000593959 BRINP3Q76B58 766 aa24.54■■□□□ 1.52
SYMPK-204ENST00000593959 ROBO2Q9HCK4 1378 aa24.52■■□□□ 1.52
SYMPK-204ENST00000593959 ANKRD30BQ9BXX2 1392 aa24.51■■□□□ 1.51
SYMPK-204ENST00000593959 ADGRF5Q8IZF2 1346 aa24.5■■□□□ 1.51
SYMPK-204ENST00000593959 RAB3GAP2Q9H2M9 1393 aa24.48■■□□□ 1.51
SYMPK-204ENST00000593959 ASXL1Q8IXJ9 1541 aa24.47■■□□□ 1.51
SYMPK-204ENST00000593959 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
SYMPK-204ENST00000593959 SPATA31A6Q5VVP1 1343 aa24.46■■□□□ 1.51
SYMPK-204ENST00000593959 RGL3Q3MIN7 710 aa24.46■■□□□ 1.51
SYMPK-204ENST00000593959 IFT172Q9UG01 1749 aa24.45■■□□□ 1.5
SYMPK-204ENST00000593959 HRCP23327 699 aa24.44■■□□□ 1.5
SYMPK-204ENST00000593959 TECPR2O15040 1411 aa24.44■■□□□ 1.5
SYMPK-204ENST00000593959 PIK3C2GO75747 1445 aa24.43■■□□□ 1.5
SYMPK-204ENST00000593959 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
SYMPK-204ENST00000593959 SHPRHQ149N8 1683 aa24.4■■□□□ 1.5
SYMPK-204ENST00000593959 NHSL1Q5SYE7 1610 aa24.4■■□□□ 1.5
SYMPK-204ENST00000593959 POTEAQ6S8J7 498 aa24.4■■□□□ 1.5
SYMPK-204ENST00000593959 ABCC11Q96J66 1382 aa24.4■■□□□ 1.5
SYMPK-204ENST00000593959 LRP6O75581 1613 aa24.39■■□□□ 1.5
SYMPK-204ENST00000593959 NRXN1Q9ULB1 1477 aa24.39■■□□□ 1.5
SYMPK-204ENST00000593959 LRPPRCP42704 1394 aaKnown RBP24.39■■□□□ 1.49
SYMPK-204ENST00000593959 LAMC1P11047 1609 aa24.37■■□□□ 1.49
SYMPK-204ENST00000593959 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
SYMPK-204ENST00000593959 C14orf93Q9H972 538 aaKnown RBP24.36■■□□□ 1.49
SYMPK-204ENST00000593959 MYOM2P54296 1465 aa24.35■■□□□ 1.49
SYMPK-204ENST00000593959 SIRT1Q96EB6 747 aa24.34■■□□□ 1.49
SYMPK-204ENST00000593959 CDC42BPGQ6DT37 1551 aa24.33■■□□□ 1.48
SYMPK-204ENST00000593959 TMEM132EQ6IEE7 984 aa24.32■■□□□ 1.48
SYMPK-204ENST00000593959 ORAI2Q96SN7 254 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms