RNA–Protein interactions for RNA: ENST00000593267.2

CACNA1A-213, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 2

Gene CACNA1A, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-213ENST00000593267 IDI1Q13907 227 aa16.48■□□□□ 0.23
CACNA1A-213ENST00000593267 NEXMIFQ5QGS0 1516 aa16.48■□□□□ 0.23
CACNA1A-213ENST00000593267 STAC3Q96MF2 364 aa16.47■□□□□ 0.23
CACNA1A-213ENST00000593267 TNRQ92752 1358 aa16.47■□□□□ 0.23
CACNA1A-213ENST00000593267 KIAA1210Q9ULL0 1709 aa16.46■□□□□ 0.23
CACNA1A-213ENST00000593267 NRXN1Q9ULB1 1477 aa16.46■□□□□ 0.23
CACNA1A-213ENST00000593267 LAMC1P11047 1609 aa16.45■□□□□ 0.22
CACNA1A-213ENST00000593267 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
CACNA1A-213ENST00000593267 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
CACNA1A-213ENST00000593267 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
CACNA1A-213ENST00000593267 KDM2AQ9Y2K7 1162 aa16.44■□□□□ 0.22
CACNA1A-213ENST00000593267 RPGRIP1LQ68CZ1 1315 aa16.44■□□□□ 0.22
CACNA1A-213ENST00000593267 A2ML1A8K2U0 1454 aa16.43■□□□□ 0.22
CACNA1A-213ENST00000593267 DISP3Q9P2K9 1392 aa16.41■□□□□ 0.22
CACNA1A-213ENST00000593267 CHGAP10645 457 aaKnown RBP16.41■□□□□ 0.22
CACNA1A-213ENST00000593267 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
CACNA1A-213ENST00000593267 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
CACNA1A-213ENST00000593267 ZNF326Q5BKZ1 582 aaKnown RBP16.4■□□□□ 0.22
CACNA1A-213ENST00000593267 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
CACNA1A-213ENST00000593267 PIK3C2GO75747 1445 aa16.39■□□□□ 0.21
CACNA1A-213ENST00000593267 ZNF316A6NFI3 1004 aaPredicted RBP16.38■□□□□ 0.21
CACNA1A-213ENST00000593267 ADGRF5Q8IZF2 1346 aa16.37■□□□□ 0.21
CACNA1A-213ENST00000593267 CEP170BQ9Y4F5 1589 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-213ENST00000593267 SETBP1Q9Y6X0 1596 aa16.36■□□□□ 0.21
CACNA1A-213ENST00000593267 LTBP4Q8N2S1 1624 aa16.36■□□□□ 0.21
CACNA1A-213ENST00000593267 IQGAP1P46940 1657 aa16.36■□□□□ 0.21
CACNA1A-213ENST00000593267 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-213ENST00000593267 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
CACNA1A-213ENST00000593267 RIMS2Q9UQ26 1411 aa16.34■□□□□ 0.21
CACNA1A-213ENST00000593267 IQSEC2Q5JU85 1478 aa16.34■□□□□ 0.21
CACNA1A-213ENST00000593267 VGFO15240 615 aaPredicted RBP16.33■□□□□ 0.2
CACNA1A-213ENST00000593267 SLIT1O75093 1534 aa16.33■□□□□ 0.2
CACNA1A-213ENST00000593267 POLR1AO95602 1720 aaPredicted RBP16.32■□□□□ 0.2
CACNA1A-213ENST00000593267 EIF4G2P78344 907 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA1A-213ENST00000593267 USP47Q96K76 1375 aa16.32■□□□□ 0.2
CACNA1A-213ENST00000593267 ARHGAP23Q9P227 1491 aa16.32■□□□□ 0.2
CACNA1A-213ENST00000593267 ADGRB1O14514 1584 aa16.31■□□□□ 0.2
CACNA1A-213ENST00000593267 TMEM2Q9UHN6 1383 aa16.31■□□□□ 0.2
CACNA1A-213ENST00000593267 NCKAP5LQ9HCH0 1330 aa16.31■□□□□ 0.2
CACNA1A-213ENST00000593267 ILDR2Q71H61 639 aa16.31■□□□□ 0.2
CACNA1A-213ENST00000593267 SETD1AO15047 1707 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-213ENST00000593267 NRXN3Q9Y4C0 1643 aa16.3■□□□□ 0.2
CACNA1A-213ENST00000593267 HSPA5P11021 654 aaKnown RBP16.3■□□□□ 0.2
CACNA1A-213ENST00000593267 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
CACNA1A-213ENST00000593267 CARD11Q9BXL7 1154 aa16.3■□□□□ 0.2
CACNA1A-213ENST00000593267 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
CACNA1A-213ENST00000593267 ASXL1Q8IXJ9 1541 aa16.28■□□□□ 0.2
CACNA1A-213ENST00000593267 ALKQ9UM73 1620 aa16.27■□□□□ 0.2
CACNA1A-213ENST00000593267 ZNF335Q9H4Z2 1342 aaPredicted RBP16.27■□□□□ 0.2
CACNA1A-213ENST00000593267 SOCS7O14512 581 aa16.27■□□□□ 0.2
CACNA1A-213ENST00000593267 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
CACNA1A-213ENST00000593267 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.27■□□□□ 0.2
CACNA1A-213ENST00000593267 SCAF11Q99590 1463 aaKnown RBP16.27■□□□□ 0.19
CACNA1A-213ENST00000593267 NUTM2DQ5VT03 806 aaPredicted RBP16.26■□□□□ 0.19
CACNA1A-213ENST00000593267 UBAP1LF5GYI3 381 aa16.24■□□□□ 0.19
CACNA1A-213ENST00000593267 HDGFP51858 240 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-213ENST00000593267 HIRIP3Q9BW71 556 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-213ENST00000593267 ARHGEF28Q8N1W1 1705 aaKnown RBP16.23■□□□□ 0.19
CACNA1A-213ENST00000593267 THEMISQ8N1K5 641 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-213ENST00000593267 PLEKHG1Q9ULL1 1385 aa16.23■□□□□ 0.19
CACNA1A-213ENST00000593267 EIF3AQ14152 1382 aaKnown RBP16.21■□□□□ 0.19
CACNA1A-213ENST00000593267 DIP2AQ14689 1571 aa16.2■□□□□ 0.18
CACNA1A-213ENST00000593267 KNDC1Q76NI1 1749 aa16.19■□□□□ 0.18
CACNA1A-213ENST00000593267 MED14O60244 1454 aa16.19■□□□□ 0.18
CACNA1A-213ENST00000593267 LTKP29376 864 aa16.19■□□□□ 0.18
CACNA1A-213ENST00000593267 ADAMTS13Q76LX8 1427 aa16.19■□□□□ 0.18
CACNA1A-213ENST00000593267 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
CACNA1A-213ENST00000593267 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
CACNA1A-213ENST00000593267 EID1Q9Y6B2 187 aa16.17■□□□□ 0.18
CACNA1A-213ENST00000593267 DLC1Q96QB1 1528 aa16.16■□□□□ 0.18
CACNA1A-213ENST00000593267 TXNDC2Q86VQ3 553 aa16.16■□□□□ 0.18
CACNA1A-213ENST00000593267 YTHDC2Q9H6S0 1430 aaKnown RBP16.16■□□□□ 0.18
CACNA1A-213ENST00000593267 CCDC7Q96M83 1385 aa16.15■□□□□ 0.18
CACNA1A-213ENST00000593267 TMEM132EQ6IEE7 984 aa16.15■□□□□ 0.18
CACNA1A-213ENST00000593267 TESK2Q96S53 571 aa16.15■□□□□ 0.18
CACNA1A-213ENST00000593267 WASHC2AQ641Q2 1341 aa16.15■□□□□ 0.18
CACNA1A-213ENST00000593267 SCAF1Q9H7N4 1312 aaKnown RBP16.15■□□□□ 0.18
CACNA1A-213ENST00000593267 SBNO2Q9Y2G9 1366 aa16.14■□□□□ 0.17
CACNA1A-213ENST00000593267 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
CACNA1A-213ENST00000593267 CPS1P31327 1500 aa16.14■□□□□ 0.17
CACNA1A-213ENST00000593267 KIF7Q2M1P5 1343 aa16.13■□□□□ 0.17
CACNA1A-213ENST00000593267 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
CACNA1A-213ENST00000593267 METP08581 1390 aa16.12■□□□□ 0.17
CACNA1A-213ENST00000593267 TECPR2O15040 1411 aa16.11■□□□□ 0.17
CACNA1A-213ENST00000593267 DIEXFQ68CQ4 756 aaKnown RBP16.11■□□□□ 0.17
CACNA1A-213ENST00000593267 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
CACNA1A-213ENST00000593267 PIP4K2BP78356 416 aa16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 TRAK1Q9UPV9 953 aa16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 CENPJQ9HC77 1338 aaPredicted RBP16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 XRN1Q8IZH2 1706 aaKnown RBP16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 ABCC11Q96J66 1382 aa16.1■□□□□ 0.17
CACNA1A-213ENST00000593267 TOM1O60784 492 aa16.09■□□□□ 0.17
CACNA1A-213ENST00000593267 TBX22Q9Y458 520 aa16.08■□□□□ 0.16
CACNA1A-213ENST00000593267 TMF1P82094 1093 aa16.07■□□□□ 0.16
CACNA1A-213ENST00000593267 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
CACNA1A-213ENST00000593267 MYOM1P52179 1685 aa16.07■□□□□ 0.16
CACNA1A-213ENST00000593267 FAM135BQ49AJ0 1406 aa16.06■□□□□ 0.16
CACNA1A-213ENST00000593267 PTPRUQ92729 1446 aa16.06■□□□□ 0.16
CACNA1A-213ENST00000593267 PIK3R4Q99570 1358 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms