RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 BCANQ96GW7 911 aa27.08■■□□□ 1.93
RETREG3-212ENST00000593251 NWD1Q149M9 1564 aa27.08■■□□□ 1.93
RETREG3-212ENST00000593251 ROBO1Q9Y6N7 1651 aa27.08■■□□□ 1.92
RETREG3-212ENST00000593251 FAM135BQ49AJ0 1406 aa27.06■■□□□ 1.92
RETREG3-212ENST00000593251 UNC13BO14795 1591 aa27.05■■□□□ 1.92
RETREG3-212ENST00000593251 TMEM131LA2VDJ0 1609 aa27.05■■□□□ 1.92
RETREG3-212ENST00000593251 CHD2O14647 1828 aaKnown RBP27.04■■□□□ 1.92
RETREG3-212ENST00000593251 E9PCH4 1651 aa27.03■■□□□ 1.92
RETREG3-212ENST00000593251 ZFYVE9O95405 1425 aa27.03■■□□□ 1.92
RETREG3-212ENST00000593251 NKTRP30414 1462 aaKnown RBP27.03■■□□□ 1.92
RETREG3-212ENST00000593251 RIMS2Q9UQ26 1411 aa27■■□□□ 1.91
RETREG3-212ENST00000593251 RGS17Q9UGC6 210 aaPredicted RBP26.99■■□□□ 1.91
RETREG3-212ENST00000593251 PLEKHG1Q9ULL1 1385 aa26.98■■□□□ 1.91
RETREG3-212ENST00000593251 PPP1R15AO75807 674 aaPredicted RBP26.98■■□□□ 1.91
RETREG3-212ENST00000593251 CHGAP10645 457 aaKnown RBP26.97■■□□□ 1.91
RETREG3-212ENST00000593251 IQGAP3Q86VI3 1631 aa26.95■■□□□ 1.91
RETREG3-212ENST00000593251 MSH6P52701 1360 aa26.95■■□□□ 1.9
RETREG3-212ENST00000593251 PHLPP1O60346 1717 aa26.93■■□□□ 1.9
RETREG3-212ENST00000593251 NUTM2DQ5VT03 806 aaPredicted RBP26.93■■□□□ 1.9
RETREG3-212ENST00000593251 HDGFP51858 240 aaKnown RBP26.91■■□□□ 1.9
RETREG3-212ENST00000593251 ROCK1Q13464 1354 aa26.9■■□□□ 1.9
RETREG3-212ENST00000593251 ITGAEP38570 1179 aa26.89■■□□□ 1.9
RETREG3-212ENST00000593251 SLAIN2Q9P270 581 aa26.88■■□□□ 1.89
RETREG3-212ENST00000593251 TBX22Q9Y458 520 aa26.87■■□□□ 1.89
RETREG3-212ENST00000593251 ADAMTS13Q76LX8 1427 aa26.86■■□□□ 1.89
RETREG3-212ENST00000593251 PPARGC1BQ86YN6 1023 aaKnown RBP26.86■■□□□ 1.89
RETREG3-212ENST00000593251 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.86■■□□□ 1.89
RETREG3-212ENST00000593251 NUP155O75694 1391 aa26.84■■□□□ 1.89
RETREG3-212ENST00000593251 DIP2AQ14689 1571 aa26.84■■□□□ 1.89
RETREG3-212ENST00000593251 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.83■■□□□ 1.89
RETREG3-212ENST00000593251 POTEAQ6S8J7 498 aa26.83■■□□□ 1.89
RETREG3-212ENST00000593251 C14orf37Q86TY3 774 aa26.82■■□□□ 1.88
RETREG3-212ENST00000593251 COL16A1Q07092 1604 aaPredicted RBP26.8■■□□□ 1.88
RETREG3-212ENST00000593251 SPHKAPQ2M3C7 1700 aa26.8■■□□□ 1.88
RETREG3-212ENST00000593251 TRPM2O94759 1503 aa26.78■■□□□ 1.88
RETREG3-212ENST00000593251 NCOA3Q9Y6Q9 1424 aa26.77■■□□□ 1.88
RETREG3-212ENST00000593251 JCADQ9P266 1359 aa26.76■■□□□ 1.87
RETREG3-212ENST00000593251 PIK3R4Q99570 1358 aa26.75■■□□□ 1.87
RETREG3-212ENST00000593251 NRXN3Q9Y4C0 1643 aa26.75■■□□□ 1.87
RETREG3-212ENST00000593251 PTPRUQ92729 1446 aa26.74■■□□□ 1.87
RETREG3-212ENST00000593251 SETD1AO15047 1707 aaKnown RBP26.73■■□□□ 1.87
RETREG3-212ENST00000593251 AMOTL2Q9Y2J4 779 aa26.72■■□□□ 1.87
RETREG3-212ENST00000593251 C19orf44Q9H6X5 657 aa26.71■■□□□ 1.87
RETREG3-212ENST00000593251 ATF3P18847 181 aa26.7■■□□□ 1.86
RETREG3-212ENST00000593251 CADPS2Q86UW7 1296 aa26.7■■□□□ 1.86
RETREG3-212ENST00000593251 AHDC1Q5TGY3 1603 aaPredicted RBP26.69■■□□□ 1.86
RETREG3-212ENST00000593251 XRN1Q8IZH2 1706 aaKnown RBP26.69■■□□□ 1.86
RETREG3-212ENST00000593251 LRP6O75581 1613 aa26.68■■□□□ 1.86
RETREG3-212ENST00000593251 SETBP1Q9Y6X0 1596 aa26.67■■□□□ 1.86
RETREG3-212ENST00000593251 ZNF326Q5BKZ1 582 aaKnown RBP26.67■■□□□ 1.86
RETREG3-212ENST00000593251 SHPRHQ149N8 1683 aa26.66■■□□□ 1.86
RETREG3-212ENST00000593251 CLTCL1P53675 1640 aa26.66■■□□□ 1.86
RETREG3-212ENST00000593251 KIF1BO60333 1816 aa26.63■■□□□ 1.85
RETREG3-212ENST00000593251 BRINP3Q76B58 766 aa26.61■■□□□ 1.85
RETREG3-212ENST00000593251 SPATA31A6Q5VVP1 1343 aa26.61■■□□□ 1.85
RETREG3-212ENST00000593251 NEXMIFQ5QGS0 1516 aa26.6■■□□□ 1.85
RETREG3-212ENST00000593251 METP08581 1390 aa26.6■■□□□ 1.85
RETREG3-212ENST00000593251 MEX3CQ5U5Q3 659 aaKnown RBP26.6■■□□□ 1.85
RETREG3-212ENST00000593251 DCCP43146 1447 aa26.57■■□□□ 1.84
RETREG3-212ENST00000593251 ASXL1Q8IXJ9 1541 aa26.57■■□□□ 1.84
RETREG3-212ENST00000593251 NALCNQ8IZF0 1738 aa26.56■■□□□ 1.84
RETREG3-212ENST00000593251 NHSL1Q5SYE7 1610 aa26.56■■□□□ 1.84
RETREG3-212ENST00000593251 MST1RQ04912 1400 aa26.56■■□□□ 1.84
RETREG3-212ENST00000593251 NAIPQ13075 1403 aa26.55■■□□□ 1.84
RETREG3-212ENST00000593251 RRBP1Q9P2E9 1410 aaKnown RBP26.55■■□□□ 1.84
RETREG3-212ENST00000593251 NUTM2BA6NNL0 878 aaPredicted RBP26.53■■□□□ 1.84
RETREG3-212ENST00000593251 NUTM2EB1AL46 878 aaPredicted RBP26.53■■□□□ 1.84
RETREG3-212ENST00000593251 NUTM2AQ8IVF1 878 aaPredicted RBP26.53■■□□□ 1.84
RETREG3-212ENST00000593251 ADGRL3Q9HAR2 1447 aa26.5■■□□□ 1.83
RETREG3-212ENST00000593251 ZNF772Q68DY9 489 aaPredicted RBP26.49■■□□□ 1.83
RETREG3-212ENST00000593251 TRIM52Q96A61 297 aa26.48■■□□□ 1.83
RETREG3-212ENST00000593251 DDX17Q92841 729 aaKnown RBP26.47■■□□□ 1.83
RETREG3-212ENST00000593251 SETD5Q9C0A6 1442 aa26.47■■□□□ 1.83
RETREG3-212ENST00000593251 PPLO60437 1756 aa26.43■■□□□ 1.82
RETREG3-212ENST00000593251 LRRC59Q96AG4 307 aaKnown RBP26.41■■□□□ 1.82
RETREG3-212ENST00000593251 AFF2P51816 1311 aa26.4■■□□□ 1.82
RETREG3-212ENST00000593251 HFM1A2PYH4 1435 aa26.39■■□□□ 1.82
RETREG3-212ENST00000593251 C1orf167Q5SNV9 1468 aa26.39■■□□□ 1.82
RETREG3-212ENST00000593251 RXRBP28702 533 aa26.39■■□□□ 1.82
RETREG3-212ENST00000593251 PNPLA6Q8IY17 1366 aa26.38■■□□□ 1.81
RETREG3-212ENST00000593251 ROBO2Q9HCK4 1378 aa26.38■■□□□ 1.81
RETREG3-212ENST00000593251 VGFO15240 615 aaPredicted RBP26.38■■□□□ 1.81
RETREG3-212ENST00000593251 PTCH1Q13635 1447 aa26.38■■□□□ 1.81
RETREG3-212ENST00000593251 SLC4A1APQ9BWU0 796 aaKnown RBP26.37■■□□□ 1.81
RETREG3-212ENST00000593251 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.81
RETREG3-212ENST00000593251 C8orf37Q96NL8 207 aa26.34■■□□□ 1.81
RETREG3-212ENST00000593251 LAMC1P11047 1609 aa26.34■■□□□ 1.81
RETREG3-212ENST00000593251 FOXD1Q16676 465 aa26.32■■□□□ 1.8
RETREG3-212ENST00000593251 ORAI2Q96SN7 254 aa26.32■■□□□ 1.8
RETREG3-212ENST00000593251 RPGRIP1LQ68CZ1 1315 aa26.32■■□□□ 1.8
RETREG3-212ENST00000593251 CDK12Q9NYV4 1490 aaPredicted RBP26.3■■□□□ 1.8
RETREG3-212ENST00000593251 ADAMTS2O95450 1211 aa26.28■■□□□ 1.8
RETREG3-212ENST00000593251 PRAG1Q86YV5 1406 aa26.28■■□□□ 1.8
RETREG3-212ENST00000593251 QTRT2Q9H974 415 aaKnown RBP26.27■■□□□ 1.8
RETREG3-212ENST00000593251 IFT172Q9UG01 1749 aa26.25■■□□□ 1.79
RETREG3-212ENST00000593251 RGS12O14924 1447 aa26.25■■□□□ 1.79
RETREG3-212ENST00000593251 SOS2Q07890 1332 aaPredicted RBP26.25■■□□□ 1.79
RETREG3-212ENST00000593251 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
RETREG3-212ENST00000593251 NGLY1Q96IV0 654 aa26.23■■□□□ 1.79
RETREG3-212ENST00000593251 CDC42BPGQ6DT37 1551 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms