RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 TNNQ9UQP3 1299 aa18.19■□□□□ 0.5
CIRBP-242ENST00000593093 NUP160Q12769 1436 aa18.19■□□□□ 0.5
CIRBP-242ENST00000593093 TESK2Q96S53 571 aa18.16■□□□□ 0.5
CIRBP-242ENST00000593093 TRIM44Q96DX7 344 aaPredicted RBP18.16■□□□□ 0.5
CIRBP-242ENST00000593093 RALGAPBQ86X10 1494 aa18.16■□□□□ 0.5
CIRBP-242ENST00000593093 CHGAP10645 457 aaKnown RBP18.15■□□□□ 0.5
CIRBP-242ENST00000593093 TBC1D2Q9BYX2 928 aa18.15■□□□□ 0.5
CIRBP-242ENST00000593093 XRCC6P12956 609 aaKnown RBP eCLIP18.14■□□□□ 0.49
CIRBP-242ENST00000593093 ARID3AQ99856 593 aa18.14■□□□□ 0.49
CIRBP-242ENST00000593093 PDZRN3Q9UPQ7 1066 aa18.14■□□□□ 0.49
CIRBP-242ENST00000593093 FTSJ3Q8IY81 847 aaKnown RBP18.13■□□□□ 0.49
CIRBP-242ENST00000593093 KDM5CP41229 1560 aa18.13■□□□□ 0.49
CIRBP-242ENST00000593093 E9PSI1 815 aa18.12■□□□□ 0.49
CIRBP-242ENST00000593093 RBM10P98175 930 aaKnown RBP18.12■□□□□ 0.49
CIRBP-242ENST00000593093 MYH16Q9H6N6 1097 aa18.11■□□□□ 0.49
CIRBP-242ENST00000593093 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
CIRBP-242ENST00000593093 ERBINQ96RT1 1412 aa18.11■□□□□ 0.49
CIRBP-242ENST00000593093 CGNL1Q0VF96 1302 aa18.11■□□□□ 0.49
CIRBP-242ENST00000593093 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
CIRBP-242ENST00000593093 TRAK2O60296 914 aa18.1■□□□□ 0.49
CIRBP-242ENST00000593093 MCM4P33991 863 aa18.09■□□□□ 0.49
CIRBP-242ENST00000593093 PCDHB15Q9Y5E8 787 aa18.09■□□□□ 0.49
CIRBP-242ENST00000593093 ZBTB7CA1YPR0 619 aa18.08■□□□□ 0.49
CIRBP-242ENST00000593093 USP19O94966 1318 aa18.08■□□□□ 0.49
CIRBP-242ENST00000593093 MBD5Q9P267 1494 aa18.08■□□□□ 0.49
CIRBP-242ENST00000593093 AFAP1Q8N556 730 aa18.08■□□□□ 0.48
CIRBP-242ENST00000593093 NCLP19338 710 aaKnown RBP18.07■□□□□ 0.48
CIRBP-242ENST00000593093 HSCBQ8IWL3 235 aa18.07■□□□□ 0.48
CIRBP-242ENST00000593093 ERCC6L2Q5T890 1561 aa18.07■□□□□ 0.48
CIRBP-242ENST00000593093 RLBP1P12271 317 aa18.06■□□□□ 0.48
CIRBP-242ENST00000593093 CDCA8Q53HL2 280 aa18.06■□□□□ 0.48
CIRBP-242ENST00000593093 PMFBP1Q8TBY8 1022 aa18.05■□□□□ 0.48
CIRBP-242ENST00000593093 C22orf23Q9BZE7 217 aa18.05■□□□□ 0.48
CIRBP-242ENST00000593093 RWDD1Q9H446 243 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-242ENST00000593093 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
CIRBP-242ENST00000593093 AMER1Q5JTC6 1135 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-242ENST00000593093 MORC1Q86VD1 984 aa18.05■□□□□ 0.48
CIRBP-242ENST00000593093 UHRF1BP1Q6BDS2 1440 aa18.04■□□□□ 0.48
CIRBP-242ENST00000593093 DNMT1P26358 1616 aaKnown RBP18.04■□□□□ 0.48
CIRBP-242ENST00000593093 PDE4CQ08493 712 aa18.03■□□□□ 0.48
CIRBP-242ENST00000593093 ITPRIPQ8IWB1 547 aa18.03■□□□□ 0.48
CIRBP-242ENST00000593093 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
CIRBP-242ENST00000593093 WWC1Q8IX03 1113 aa18.02■□□□□ 0.48
CIRBP-242ENST00000593093 BLMP54132 1417 aaPredicted RBP18.02■□□□□ 0.47
CIRBP-242ENST00000593093 CHMP5Q9NZZ3 219 aa18.02■□□□□ 0.47
CIRBP-242ENST00000593093 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
CIRBP-242ENST00000593093 U2SURPO15042 1029 aaKnown RBP18.01■□□□□ 0.47
CIRBP-242ENST00000593093 PDE3AQ14432 1141 aa18.01■□□□□ 0.47
CIRBP-242ENST00000593093 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
CIRBP-242ENST00000593093 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
CIRBP-242ENST00000593093 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.477e-7■■■■□ 23.3
CIRBP-242ENST00000593093 TCP11L2Q8N4U5 519 aa18■□□□□ 0.47
CIRBP-242ENST00000593093 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
CIRBP-242ENST00000593093 CHD1O14646 1710 aa17.99■□□□□ 0.47
CIRBP-242ENST00000593093 TSR2Q969E8 191 aaKnown RBP17.99■□□□□ 0.47
CIRBP-242ENST00000593093 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
CIRBP-242ENST00000593093 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
CIRBP-242ENST00000593093 GRPEL1Q9HAV7 217 aa17.98■□□□□ 0.47
CIRBP-242ENST00000593093 ZMYM4Q5VZL5 1548 aa17.98■□□□□ 0.47
CIRBP-242ENST00000593093 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
CIRBP-242ENST00000593093 NPM1P06748 294 aaKnown RBP eCLIP17.97■□□□□ 0.47
CIRBP-242ENST00000593093 TPRNQ4KMQ1 711 aa17.97■□□□□ 0.47
CIRBP-242ENST00000593093 ANP32BQ92688 251 aaKnown RBP17.97■□□□□ 0.47
CIRBP-242ENST00000593093 LNPKQ9C0E8 428 aa17.97■□□□□ 0.47
CIRBP-242ENST00000593093 RARSP54136 660 aaKnown RBP17.97■□□□□ 0.47
CIRBP-242ENST00000593093 CFAP70Q5T0N1 1121 aa17.97■□□□□ 0.47
CIRBP-242ENST00000593093 ESPNB1AK53 854 aa17.96■□□□□ 0.47
CIRBP-242ENST00000593093 ABCA8O94911 1581 aa17.96■□□□□ 0.47
CIRBP-242ENST00000593093 ANTXR1Q9H6X2 564 aa17.96■□□□□ 0.47
CIRBP-242ENST00000593093 ZNF521Q96K83 1311 aa17.96■□□□□ 0.47
CIRBP-242ENST00000593093 MRE11P49959 708 aa17.95■□□□□ 0.46
CIRBP-242ENST00000593093 EIF3AQ14152 1382 aaKnown RBP17.95■□□□□ 0.46
CIRBP-242ENST00000593093 RRP9O43818 475 aaKnown RBP17.94■□□□□ 0.46
CIRBP-242ENST00000593093 TRAK1Q9UPV9 953 aa17.94■□□□□ 0.46
CIRBP-242ENST00000593093 SPAG9O60271 1321 aaKnown RBP17.93■□□□□ 0.46
CIRBP-242ENST00000593093 ABCC10Q5T3U5 1492 aa17.93■□□□□ 0.46
CIRBP-242ENST00000593093 KIF3BO15066 747 aa17.93■□□□□ 0.46
CIRBP-242ENST00000593093 ITSN2Q9NZM3 1697 aa17.92■□□□□ 0.46
CIRBP-242ENST00000593093 NUTM2DQ5VT03 806 aaPredicted RBP17.92■□□□□ 0.46
CIRBP-242ENST00000593093 SYCP2Q9BX26 1530 aa17.92■□□□□ 0.46
CIRBP-242ENST00000593093 AAMPQ13685 434 aa17.92■□□□□ 0.46
CIRBP-242ENST00000593093 AEBP2Q6ZN18 517 aaPredicted RBP17.92■□□□□ 0.46
CIRBP-242ENST00000593093 DZIP1LQ8IYY4 767 aaKnown RBP17.92■□□□□ 0.46
CIRBP-242ENST00000593093 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
CIRBP-242ENST00000593093 PLEKHH2Q8IVE3 1493 aa17.91■□□□□ 0.46
CIRBP-242ENST00000593093 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
CIRBP-242ENST00000593093 CLCN1P35523 988 aa17.91■□□□□ 0.46
CIRBP-242ENST00000593093 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
CIRBP-242ENST00000593093 MTHFSP49914 203 aa17.9■□□□□ 0.46
CIRBP-242ENST00000593093 ZKSCAN2Q63HK3 967 aa17.9■□□□□ 0.46
CIRBP-242ENST00000593093 POLR1AO95602 1720 aaPredicted RBP17.9■□□□□ 0.46
CIRBP-242ENST00000593093 FGD1P98174 961 aa17.9■□□□□ 0.46
CIRBP-242ENST00000593093 CCDC141Q6ZP82 1450 aa17.89■□□□□ 0.45
CIRBP-242ENST00000593093 DDX11L8A8MPP1 907 aa17.89■□□□□ 0.45
CIRBP-242ENST00000593093 FOXD4L5Q5VV16 416 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-242ENST00000593093 FOXD4L4Q8WXT5 416 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-242ENST00000593093 CARD14Q9BXL6 1004 aa17.89■□□□□ 0.45
CIRBP-242ENST00000593093 BCL11BQ9C0K0 894 aaPredicted RBP17.89■□□□□ 0.45
CIRBP-242ENST00000593093 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
CIRBP-242ENST00000593093 CFAP53Q96M91 514 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms