RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 MYO5BQ9ULV0 1848 aa30.37■■■□□ 2.45
DNMT1-227ENST00000592342 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.36■■■□□ 2.45
DNMT1-227ENST00000592342 NPHP4O75161 1426 aaPredicted RBP30.34■■■□□ 2.45
DNMT1-227ENST00000592342 DHX57Q6P158 1386 aaKnown RBP30.33■■■□□ 2.45
DNMT1-227ENST00000592342 NUTM2DQ5VT03 806 aaPredicted RBP30.32■■■□□ 2.44
DNMT1-227ENST00000592342 BCANQ96GW7 911 aa30.32■■■□□ 2.44
DNMT1-227ENST00000592342 NEURL4Q96JN8 1562 aa30.32■■■□□ 2.44
DNMT1-227ENST00000592342 ZFYVE9O95405 1425 aa30.31■■■□□ 2.44
DNMT1-227ENST00000592342 RGL3Q3MIN7 710 aa30.31■■■□□ 2.44
DNMT1-227ENST00000592342 MED14O60244 1454 aa30.31■■■□□ 2.44
DNMT1-227ENST00000592342 RPGRIP1LQ68CZ1 1315 aa30.27■■■□□ 2.44
DNMT1-227ENST00000592342 SENP3Q9H4L4 574 aaPredicted RBP30.26■■■□□ 2.43
DNMT1-227ENST00000592342 SPATA31E1Q6ZUB1 1445 aa30.25■■■□□ 2.43
DNMT1-227ENST00000592342 IQGAP1P46940 1657 aa30.25■■■□□ 2.43
DNMT1-227ENST00000592342 PLEKHG1Q9ULL1 1385 aa30.23■■■□□ 2.43
DNMT1-227ENST00000592342 NEXMIFQ5QGS0 1516 aa30.22■■■□□ 2.43
DNMT1-227ENST00000592342 VGFO15240 615 aaPredicted RBP30.21■■■□□ 2.43
DNMT1-227ENST00000592342 SLC26A8Q96RN1 970 aa30.17■■■□□ 2.42
DNMT1-227ENST00000592342 SIN3AQ96ST3 1273 aa30.14■■■□□ 2.42
DNMT1-227ENST00000592342 NEUROD1Q13562 356 aa30.13■■■□□ 2.41
DNMT1-227ENST00000592342 ZNF335Q9H4Z2 1342 aaPredicted RBP30.12■■■□□ 2.41
DNMT1-227ENST00000592342 PPLO60437 1756 aa30.12■■■□□ 2.41
DNMT1-227ENST00000592342 DCAF11Q8TEB1 546 aa30.08■■■□□ 2.41
DNMT1-227ENST00000592342 TBX22Q9Y458 520 aa30.08■■■□□ 2.41
DNMT1-227ENST00000592342 ADGRF5Q8IZF2 1346 aa30.07■■■□□ 2.4
DNMT1-227ENST00000592342 ADAMTS13Q76LX8 1427 aa30.06■■■□□ 2.4
DNMT1-227ENST00000592342 KDM2AQ9Y2K7 1162 aa30.06■■■□□ 2.4
DNMT1-227ENST00000592342 SETBP1Q9Y6X0 1596 aa30.05■■■□□ 2.4
DNMT1-227ENST00000592342 IFT172Q9UG01 1749 aa30.05■■■□□ 2.4
DNMT1-227ENST00000592342 DIP2AQ14689 1571 aa30.04■■■□□ 2.4
DNMT1-227ENST00000592342 MYOM2P54296 1465 aa30.02■■■□□ 2.4
DNMT1-227ENST00000592342 CCER1Q8TC90 406 aaPredicted RBP30.02■■■□□ 2.4
DNMT1-227ENST00000592342 STAC3Q96MF2 364 aa30.02■■■□□ 2.4
DNMT1-227ENST00000592342 NRXN3Q9Y4C0 1643 aa30■■■□□ 2.39
DNMT1-227ENST00000592342 KCNA6P17658 529 aa29.99■■■□□ 2.39
DNMT1-227ENST00000592342 LTBP4Q8N2S1 1624 aa29.97■■■□□ 2.39
DNMT1-227ENST00000592342 PIK3R4Q99570 1358 aa29.97■■■□□ 2.39
DNMT1-227ENST00000592342 CPS1P31327 1500 aa29.96■■■□□ 2.39
DNMT1-227ENST00000592342 PIK3C2GO75747 1445 aa29.96■■■□□ 2.39
DNMT1-227ENST00000592342 CLSPNQ9HAW4 1339 aa29.95■■■□□ 2.38
DNMT1-227ENST00000592342 TONSLQ96HA7 1378 aa29.94■■■□□ 2.38
DNMT1-227ENST00000592342 ALKQ9UM73 1620 aa29.94■■■□□ 2.38
DNMT1-227ENST00000592342 CERKQ8TCT0 537 aa29.94■■■□□ 2.38
DNMT1-227ENST00000592342 L3MBTL2Q969R5 705 aa29.94■■■□□ 2.38
DNMT1-227ENST00000592342 METP08581 1390 aa29.93■■■□□ 2.38
DNMT1-227ENST00000592342 NRXN1Q9ULB1 1477 aa29.93■■■□□ 2.38
DNMT1-227ENST00000592342 AMOTL2Q9Y2J4 779 aa29.91■■■□□ 2.38
DNMT1-227ENST00000592342 C14orf93Q9H972 538 aaKnown RBP29.89■■■□□ 2.38
DNMT1-227ENST00000592342 STRCP1A6NGW2 1772 aa29.88■■■□□ 2.37
DNMT1-227ENST00000592342 CFAP70Q5T0N1 1121 aa29.88■■■□□ 2.37
DNMT1-227ENST00000592342 NWD1Q149M9 1564 aa29.88■■■□□ 2.37
DNMT1-227ENST00000592342 PROSER2Q86WR7 435 aaPredicted RBP29.87■■■□□ 2.37
DNMT1-227ENST00000592342 CHD2O14647 1828 aaKnown RBP29.87■■■□□ 2.37
DNMT1-227ENST00000592342 PTPRUQ92729 1446 aa29.86■■■□□ 2.37
DNMT1-227ENST00000592342 NKTRP30414 1462 aaKnown RBP29.86■■■□□ 2.37
DNMT1-227ENST00000592342 SETD1AO15047 1707 aaKnown RBP29.83■■■□□ 2.37
DNMT1-227ENST00000592342 LAMC1P11047 1609 aa29.83■■■□□ 2.37
DNMT1-227ENST00000592342 LRRC7Q96NW7 1537 aa29.83■■■□□ 2.37
DNMT1-227ENST00000592342 TMEM132EQ6IEE7 984 aa29.83■■■□□ 2.37
DNMT1-227ENST00000592342 STK26Q9P289 416 aa29.8■■■□□ 2.36
DNMT1-227ENST00000592342 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
DNMT1-227ENST00000592342 TMEM94Q12767 1356 aa29.79■■■□□ 2.36
DNMT1-227ENST00000592342 RBM33Q96EV2 1170 aaKnown RBP29.78■■■□□ 2.36
DNMT1-227ENST00000592342 IQSEC2Q5JU85 1478 aa29.78■■■□□ 2.36
DNMT1-227ENST00000592342 XRN1Q8IZH2 1706 aaKnown RBP29.76■■■□□ 2.36
DNMT1-227ENST00000592342 C14orf37Q86TY3 774 aa29.76■■■□□ 2.35
DNMT1-227ENST00000592342 ASXL1Q8IXJ9 1541 aa29.75■■■□□ 2.35
DNMT1-227ENST00000592342 LRPPRCP42704 1394 aaKnown RBP29.75■■■□□ 2.35
DNMT1-227ENST00000592342 YTHDC2Q9H6S0 1430 aaKnown RBP29.74■■■□□ 2.35
DNMT1-227ENST00000592342 TIMELESSQ9UNS1 1208 aa29.72■■■□□ 2.35
DNMT1-227ENST00000592342 PTCH1Q13635 1447 aa29.71■■■□□ 2.35
DNMT1-227ENST00000592342 ABCC11Q96J66 1382 aa29.7■■■□□ 2.35
DNMT1-227ENST00000592342 ROBO2Q9HCK4 1378 aa29.69■■■□□ 2.34
DNMT1-227ENST00000592342 NCOA3Q9Y6Q9 1424 aa29.69■■■□□ 2.34
DNMT1-227ENST00000592342 ADGRB1O14514 1584 aa29.68■■■□□ 2.34
DNMT1-227ENST00000592342 MSH6P52701 1360 aa29.67■■■□□ 2.34
DNMT1-227ENST00000592342 KIAA1210Q9ULL0 1709 aa29.67■■■□□ 2.34
DNMT1-227ENST00000592342 TECPR2O15040 1411 aa29.66■■■□□ 2.34
DNMT1-227ENST00000592342 UBAP1LF5GYI3 381 aa29.66■■■□□ 2.34
DNMT1-227ENST00000592342 NBPF1Q3BBV0 1214 aa29.66■■■□□ 2.34
DNMT1-227ENST00000592342 NBPF8Q3BBV2 869 aa29.66■■■□□ 2.34
DNMT1-227ENST00000592342 TRAK1Q9UPV9 953 aa29.66■■■□□ 2.34
DNMT1-227ENST00000592342 TOM1O60784 492 aa29.64■■■□□ 2.34
DNMT1-227ENST00000592342 XIRP1Q702N8 1843 aaKnown RBP29.64■■■□□ 2.33
DNMT1-227ENST00000592342 ROCK2O75116 1388 aaKnown RBP29.63■■■□□ 2.33
DNMT1-227ENST00000592342 KNDC1Q76NI1 1749 aa29.62■■■□□ 2.33
DNMT1-227ENST00000592342 WAPLQ7Z5K2 1190 aa29.62■■■□□ 2.33
DNMT1-227ENST00000592342 C19orf44Q9H6X5 657 aa29.62■■■□□ 2.33
DNMT1-227ENST00000592342 SIRT1Q96EB6 747 aa29.61■■■□□ 2.33
DNMT1-227ENST00000592342 POGKQ9P215 609 aa29.61■■■□□ 2.33
DNMT1-227ENST00000592342 FBXO41Q8TF61 875 aa29.6■■■□□ 2.33
DNMT1-227ENST00000592342 TRPM1Q7Z4N2 1603 aa29.6■■■□□ 2.33
DNMT1-227ENST00000592342 PRAM1Q96QH2 718 aa29.59■■■□□ 2.33
DNMT1-227ENST00000592342 FAM135BQ49AJ0 1406 aa29.59■■■□□ 2.33
DNMT1-227ENST00000592342 ATF3P18847 181 aa29.58■■■□□ 2.33
DNMT1-227ENST00000592342 DLC1Q96QB1 1528 aa29.57■■■□□ 2.32
DNMT1-227ENST00000592342 ADGRL3Q9HAR2 1447 aa29.57■■■□□ 2.32
DNMT1-227ENST00000592342 PLEKHH1Q9ULM0 1364 aa29.56■■■□□ 2.32
DNMT1-227ENST00000592342 SCAF1Q9H7N4 1312 aaKnown RBP29.56■■■□□ 2.32
DNMT1-227ENST00000592342 SAFB2Q14151 953 aaKnown RBP eCLIP29.56■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms