RNA–Protein interactions for RNA: ENST00000591357.5

JRK-208, Transcript of Jrk helix-turn-helix protein, human

TSL 4

Gene JRK, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
JRK-208	ENST00000591357	TRIM52	Q96A61	297 aa		31.95	■■■□□ 2.71
JRK-208	ENST00000591357	SENP3	Q9H4L4	574 aa	Predicted RBP	31.95	■■■□□ 2.71
JRK-208	ENST00000591357	KCNA6	P17658	529 aa		31.92	■■■□□ 2.7
JRK-208	ENST00000591357	NUTM2D	Q5VT03	806 aa	Predicted RBP	31.91	■■■□□ 2.7
JRK-208	ENST00000591357	BCAN	Q96GW7	911 aa		31.91	■■■□□ 2.7
JRK-208	ENST00000591357	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	31.9	■■■□□ 2.7
JRK-208	ENST00000591357	PLEKHG1	Q9ULL1	1385 aa		31.9	■■■□□ 2.7
JRK-208	ENST00000591357	PIP4K2B	P78356	416 aa		31.89	■■■□□ 2.7
JRK-208	ENST00000591357	ALK	Q9UM73	1620 aa		31.87	■■■□□ 2.69
JRK-208	ENST00000591357	PPP1R15A	O75807	674 aa	Predicted RBP	31.87	■■■□□ 2.69
JRK-208	ENST00000591357	TBX22	Q9Y458	520 aa		31.85	■■■□□ 2.69
JRK-208	ENST00000591357	SPHKAP	Q2M3C7	1700 aa		31.85	■■■□□ 2.69
JRK-208	ENST00000591357	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.83	■■■□□ 2.69
JRK-208	ENST00000591357	SCAF1	Q9H7N4	1312 aa	Known RBP	31.82	■■■□□ 2.68
JRK-208	ENST00000591357	PROSER2	Q86WR7	435 aa	Predicted RBP	31.8	■■■□□ 2.68
JRK-208	ENST00000591357	XIRP1	Q702N8	1843 aa	Known RBP	31.79	■■■□□ 2.68
JRK-208	ENST00000591357	RBM33	Q96EV2	1170 aa	Known RBP	31.79	■■■□□ 2.68
JRK-208	ENST00000591357	ADAMTS13	Q76LX8	1427 aa		31.78	■■■□□ 2.68
JRK-208	ENST00000591357	HSPA1L	P34931	641 aa		31.78	■■■□□ 2.68
JRK-208	ENST00000591357	TMEM94	Q12767	1356 aa		31.77	■■■□□ 2.68
JRK-208	ENST00000591357	TRPM2	O94759	1503 aa		31.75	■■■□□ 2.67
JRK-208	ENST00000591357	CLTCL1	P53675	1640 aa		31.75	■■■□□ 2.67
JRK-208	ENST00000591357	ZNF326	Q5BKZ1	582 aa	Known RBP	31.75	■■■□□ 2.67
JRK-208	ENST00000591357	FOXD1	Q16676	465 aa		31.74	■■■□□ 2.67
JRK-208	ENST00000591357	CHD2	O14647	1828 aa	Known RBP	31.72	■■■□□ 2.67
JRK-208	ENST00000591357	MPHOSPH9	Q99550	1183 aa		31.71	■■■□□ 2.67
JRK-208	ENST00000591357	NWD1	Q149M9	1564 aa		31.71	■■■□□ 2.67
JRK-208	ENST00000591357	NKTR	P30414	1462 aa	Known RBP	31.67	■■■□□ 2.66
JRK-208	ENST00000591357	SETD5	Q9C0A6	1442 aa		31.66	■■■□□ 2.66
JRK-208	ENST00000591357	PIK3R4	Q99570	1358 aa		31.65	■■■□□ 2.66
JRK-208	ENST00000591357	KIF1B	O60333	1816 aa		31.62	■■■□□ 2.65
JRK-208	ENST00000591357	DIP2A	Q14689	1571 aa		31.62	■■■□□ 2.65
JRK-208	ENST00000591357	NEXMIF	Q5QGS0	1516 aa		31.62	■■■□□ 2.65
JRK-208	ENST00000591357	PTPRU	Q92729	1446 aa		31.62	■■■□□ 2.65
JRK-208	ENST00000591357	AMOTL2	Q9Y2J4	779 aa		31.62	■■■□□ 2.65
JRK-208	ENST00000591357	DISP3	Q9P2K9	1392 aa		31.61	■■■□□ 2.65
JRK-208	ENST00000591357	NRXN3	Q9Y4C0	1643 aa		31.6	■■■□□ 2.65
JRK-208	ENST00000591357	SETBP1	Q9Y6X0	1596 aa		31.57	■■■□□ 2.64
JRK-208	ENST00000591357	FAM135B	Q49AJ0	1406 aa		31.56	■■■□□ 2.64
JRK-208	ENST00000591357	MET	P08581	1390 aa		31.56	■■■□□ 2.64
JRK-208	ENST00000591357	RPGRIP1L	Q68CZ1	1315 aa		31.55	■■■□□ 2.64
JRK-208	ENST00000591357	ACIN1	Q9UKV3	1341 aa	Known RBP	31.55	■■■□□ 2.64
JRK-208	ENST00000591357	VGF	O15240	615 aa	Predicted RBP	31.55	■■■□□ 2.64
JRK-208	ENST00000591357	NCOA3	Q9Y6Q9	1424 aa		31.54	■■■□□ 2.64
JRK-208	ENST00000591357	MSH6	P52701	1360 aa		31.54	■■■□□ 2.64
JRK-208	ENST00000591357	RAB3GAP2	Q9H2M9	1393 aa		31.53	■■■□□ 2.64
JRK-208	ENST00000591357	SLAIN2	Q9P270	581 aa		31.51	■■■□□ 2.63
JRK-208	ENST00000591357	ILDR2	Q71H61	639 aa		31.48	■■■□□ 2.63
JRK-208	ENST00000591357	RGL3	Q3MIN7	710 aa		31.47	■■■□□ 2.63
JRK-208	ENST00000591357	C19orf44	Q9H6X5	657 aa		31.47	■■■□□ 2.63
JRK-208	ENST00000591357	CCDC144A	A2RUR9	1427 aa		31.47	■■■□□ 2.63
JRK-208	ENST00000591357	C14orf37	Q86TY3	774 aa		31.45	■■■□□ 2.63
JRK-208	ENST00000591357	SPATA31E1	Q6ZUB1	1445 aa		31.44	■■■□□ 2.62
JRK-208	ENST00000591357	ADGRF5	Q8IZF2	1346 aa		31.42	■■■□□ 2.62
JRK-208	ENST00000591357	XRN1	Q8IZH2	1706 aa	Known RBP	31.41	■■■□□ 2.62
JRK-208	ENST00000591357	HRC	P23327	699 aa		31.41	■■■□□ 2.62
JRK-208	ENST00000591357	PPL	O60437	1756 aa		31.4	■■■□□ 2.62
JRK-208	ENST00000591357	ROBO1	Q9Y6N7	1651 aa		31.39	■■■□□ 2.62
JRK-208	ENST00000591357	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	31.39	■■■□□ 2.62
JRK-208	ENST00000591357	CADPS2	Q86UW7	1296 aa		31.39	■■■□□ 2.62
JRK-208	ENST00000591357	ATF3	P18847	181 aa		31.37	■■■□□ 2.61
JRK-208	ENST00000591357	SETD1A	O15047	1707 aa	Known RBP	31.35	■■■□□ 2.61
JRK-208	ENST00000591357	MED1	Q15648	1581 aa	Predicted RBP	31.34	■■■□□ 2.61
JRK-208	ENST00000591357	ANKRD30B	Q9BXX2	1392 aa		31.31	■■■□□ 2.6
JRK-208	ENST00000591357	ROBO2	Q9HCK4	1378 aa		31.28	■■■□□ 2.6
JRK-208	ENST00000591357	IFT172	Q9UG01	1749 aa		31.26	■■■□□ 2.59
JRK-208	ENST00000591357	DCC	P43146	1447 aa		31.25	■■■□□ 2.59
JRK-208	ENST00000591357	BRINP3	Q76B58	766 aa		31.24	■■■□□ 2.59
JRK-208	ENST00000591357	PTCH1	Q13635	1447 aa		31.23	■■■□□ 2.59
JRK-208	ENST00000591357	PRAG1	Q86YV5	1406 aa		31.23	■■■□□ 2.59
JRK-208	ENST00000591357	ADGRL3	Q9HAR2	1447 aa		31.23	■■■□□ 2.59
JRK-208	ENST00000591357	TMEM132E	Q6IEE7	984 aa		31.22	■■■□□ 2.59
JRK-208	ENST00000591357	MST1R	Q04912	1400 aa		31.21	■■■□□ 2.59
JRK-208	ENST00000591357	PHLPP1	O60346	1717 aa		31.19	■■■□□ 2.58
JRK-208	ENST00000591357	PIK3C2G	O75747	1445 aa		31.19	■■■□□ 2.58
JRK-208	ENST00000591357	C14orf93	Q9H972	538 aa	Known RBP	31.18	■■■□□ 2.58
JRK-208	ENST00000591357	STK26	Q9P289	416 aa		31.18	■■■□□ 2.58
JRK-208	ENST00000591357	NALCN	Q8IZF0	1738 aa		31.16	■■■□□ 2.58
JRK-208	ENST00000591357	CFAP70	Q5T0N1	1121 aa		31.15	■■■□□ 2.58
JRK-208	ENST00000591357	PHF23	Q9BUL5	403 aa	Predicted RBP	31.15	■■■□□ 2.58
JRK-208	ENST00000591357	LRPPRC	P42704	1394 aa	Known RBP	31.15	■■■□□ 2.58
JRK-208	ENST00000591357	WAPL	Q7Z5K2	1190 aa		31.14	■■■□□ 2.58
JRK-208	ENST00000591357	RGS17	Q9UGC6	210 aa	Predicted RBP	31.14	■■■□□ 2.58
JRK-208	ENST00000591357	NRXN1	Q9ULB1	1477 aa		31.14	■■■□□ 2.57
JRK-208	ENST00000591357	ABCC11	Q96J66	1382 aa		31.13	■■■□□ 2.57
JRK-208	ENST00000591357	JCAD	Q9P266	1359 aa		31.13	■■■□□ 2.57
JRK-208	ENST00000591357	COL16A1	Q07092	1604 aa	Predicted RBP	31.13	■■■□□ 2.57
JRK-208	ENST00000591357	ASXL1	Q8IXJ9	1541 aa		31.12	■■■□□ 2.57
JRK-208	ENST00000591357	AHDC1	Q5TGY3	1603 aa	Predicted RBP	31.12	■■■□□ 2.57
JRK-208	ENST00000591357	SOCS7	O14512	581 aa		31.11	■■■□□ 2.57
JRK-208	ENST00000591357	MYOM2	P54296	1465 aa		31.09	■■■□□ 2.57
JRK-208	ENST00000591357	C1orf167	Q5SNV9	1468 aa		31.08	■■■□□ 2.57
JRK-208	ENST00000591357	TECPR2	O15040	1411 aa		31.08	■■■□□ 2.57
JRK-208	ENST00000591357	DDX17	Q92841	729 aa	Known RBP	31.08	■■■□□ 2.57
JRK-208	ENST00000591357	ORAI2	Q96SN7	254 aa		31.07	■■■□□ 2.56
JRK-208	ENST00000591357	KDM2A	Q9Y2K7	1162 aa		31.07	■■■□□ 2.56
JRK-208	ENST00000591357	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.07	■■■□□ 2.56
JRK-208	ENST00000591357	DCAF11	Q8TEB1	546 aa		31.06	■■■□□ 2.56
JRK-208	ENST00000591357	SIRT1	Q96EB6	747 aa		31.06	■■■□□ 2.56
JRK-208	ENST00000591357	PLEKHH1	Q9ULM0	1364 aa		31.05	■■■□□ 2.56

Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms