RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-231ENST00000591097 KIF1BO60333 1816 aa34.54■■■■□ 3.12
CIRBP-231ENST00000591097 ZNF335Q9H4Z2 1342 aaPredicted RBP34.51■■■■□ 3.12
CIRBP-231ENST00000591097 CCDC144AA2RUR9 1427 aa34.5■■■■□ 3.11
CIRBP-231ENST00000591097 PLEKHG1Q9ULL1 1385 aa34.46■■■■□ 3.11
CIRBP-231ENST00000591097 HDGFP51858 240 aaKnown RBP34.45■■■■□ 3.11
CIRBP-231ENST00000591097 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.45■■■■□ 3.11
CIRBP-231ENST00000591097 NEXMIFQ5QGS0 1516 aa34.45■■■■□ 3.1
CIRBP-231ENST00000591097 ANKRD30BQ9BXX2 1392 aa34.43■■■■□ 3.1
CIRBP-231ENST00000591097 SPATA31E1Q6ZUB1 1445 aa34.42■■■■□ 3.1
CIRBP-231ENST00000591097 PPP1R15AO75807 674 aaPredicted RBP34.41■■■■□ 3.1
CIRBP-231ENST00000591097 NUTM2DQ5VT03 806 aaPredicted RBP34.41■■■■□ 3.1
CIRBP-231ENST00000591097 ZNF326Q5BKZ1 582 aaKnown RBP34.4■■■■□ 3.1
CIRBP-231ENST00000591097 CERKQ8TCT0 537 aa34.39■■■■□ 3.1
CIRBP-231ENST00000591097 STRCP1A6NGW2 1772 aa34.36■■■■□ 3.09
CIRBP-231ENST00000591097 SLC26A8Q96RN1 970 aa34.35■■■■□ 3.09
CIRBP-231ENST00000591097 ADAMTS13Q76LX8 1427 aa34.34■■■■□ 3.09
CIRBP-231ENST00000591097 CPS1P31327 1500 aa34.34■■■■□ 3.09
CIRBP-231ENST00000591097 SETBP1Q9Y6X0 1596 aa34.32■■■■□ 3.08
CIRBP-231ENST00000591097 RPGRIP1LQ68CZ1 1315 aa34.32■■■■□ 3.08
CIRBP-231ENST00000591097 PPLO60437 1756 aa34.32■■■■□ 3.08
CIRBP-231ENST00000591097 NRXN3Q9Y4C0 1643 aa34.31■■■■□ 3.08
CIRBP-231ENST00000591097 SENP3Q9H4L4 574 aaPredicted RBP34.3■■■■□ 3.08
CIRBP-231ENST00000591097 DIP2AQ14689 1571 aa34.29■■■■□ 3.08
CIRBP-231ENST00000591097 BCANQ96GW7 911 aa34.29■■■■□ 3.08
CIRBP-231ENST00000591097 IQSEC2Q5JU85 1478 aa34.28■■■■□ 3.08
CIRBP-231ENST00000591097 TBX22Q9Y458 520 aa34.26■■■■□ 3.08
CIRBP-231ENST00000591097 IFT172Q9UG01 1749 aa34.26■■■■□ 3.07
CIRBP-231ENST00000591097 RGL3Q3MIN7 710 aa34.25■■■■□ 3.07
CIRBP-231ENST00000591097 NWD1Q149M9 1564 aa34.24■■■■□ 3.07
CIRBP-231ENST00000591097 VGFO15240 615 aaPredicted RBP34.23■■■■□ 3.07
CIRBP-231ENST00000591097 LRRC7Q96NW7 1537 aa34.2■■■■□ 3.07
CIRBP-231ENST00000591097 KCNA6P17658 529 aa34.2■■■■□ 3.06
CIRBP-231ENST00000591097 CHD2O14647 1828 aaKnown RBP34.19■■■■□ 3.06
CIRBP-231ENST00000591097 PIK3R4Q99570 1358 aa34.18■■■■□ 3.06
CIRBP-231ENST00000591097 DHX57Q6P158 1386 aaKnown RBP34.17■■■■□ 3.06
CIRBP-231ENST00000591097 NKTRP30414 1462 aaKnown RBP34.15■■■■□ 3.06
CIRBP-231ENST00000591097 SETD1AO15047 1707 aaKnown RBP34.14■■■■□ 3.06
CIRBP-231ENST00000591097 FBXO41Q8TF61 875 aa34.14■■■■□ 3.06
CIRBP-231ENST00000591097 ADGRF5Q8IZF2 1346 aa34.14■■■■□ 3.06
CIRBP-231ENST00000591097 METP08581 1390 aa34.11■■■■□ 3.05
CIRBP-231ENST00000591097 PTPRUQ92729 1446 aa34.11■■■■□ 3.05
CIRBP-231ENST00000591097 ALKQ9UM73 1620 aa34.1■■■■□ 3.05
CIRBP-231ENST00000591097 MYOM2P54296 1465 aa34.1■■■■□ 3.05
CIRBP-231ENST00000591097 XIRP1Q702N8 1843 aaKnown RBP34.09■■■■□ 3.05
CIRBP-231ENST00000591097 NRXN1Q9ULB1 1477 aa34.09■■■■□ 3.05
CIRBP-231ENST00000591097 PIK3C2GO75747 1445 aa34.09■■■■□ 3.05
CIRBP-231ENST00000591097 XRN1Q8IZH2 1706 aaKnown RBP34.07■■■■□ 3.04
CIRBP-231ENST00000591097 ILDR1Q86SU0 546 aaPredicted RBP34.05■■■■□ 3.04
CIRBP-231ENST00000591097 PCGF6Q9BYE7 350 aa34.04■■■■□ 3.04
CIRBP-231ENST00000591097 TMEM94Q12767 1356 aa34.03■■■■□ 3.04
CIRBP-231ENST00000591097 AMOTL2Q9Y2J4 779 aa34.01■■■■□ 3.04
CIRBP-231ENST00000591097 PROSER2Q86WR7 435 aaPredicted RBP33.99■■■■□ 3.03
CIRBP-231ENST00000591097 PRAG1Q86YV5 1406 aa33.96■■■■□ 3.03
CIRBP-231ENST00000591097 RBM33Q96EV2 1170 aaKnown RBP33.96■■■■□ 3.03
CIRBP-231ENST00000591097 ASXL1Q8IXJ9 1541 aa33.96■■■■□ 3.03
CIRBP-231ENST00000591097 DCAF11Q8TEB1 546 aa33.95■■■■□ 3.03
CIRBP-231ENST00000591097 STAC3Q96MF2 364 aa33.94■■■■□ 3.02
CIRBP-231ENST00000591097 SIN3AQ96ST3 1273 aa33.94■■■■□ 3.02
CIRBP-231ENST00000591097 UBAP1LF5GYI3 381 aa33.93■■■■□ 3.02
CIRBP-231ENST00000591097 LAMC1P11047 1609 aa33.92■■■■□ 3.02
CIRBP-231ENST00000591097 NCOA3Q9Y6Q9 1424 aa33.92■■■■□ 3.02
CIRBP-231ENST00000591097 C14orf93Q9H972 538 aaKnown RBP33.91■■■■□ 3.02
CIRBP-231ENST00000591097 PTCH1Q13635 1447 aa33.89■■■■□ 3.02
CIRBP-231ENST00000591097 KDM2AQ9Y2K7 1162 aa33.89■■■■□ 3.02
CIRBP-231ENST00000591097 TOM1O60784 492 aa33.86■■■■□ 3.01
CIRBP-231ENST00000591097 CFAP70Q5T0N1 1121 aa33.86■■■■□ 3.01
CIRBP-231ENST00000591097 ROBO2Q9HCK4 1378 aa33.85■■■■□ 3.01
CIRBP-231ENST00000591097 TMEM132EQ6IEE7 984 aa33.84■■■■□ 3.01
CIRBP-231ENST00000591097 TECPR2O15040 1411 aa33.83■■■■□ 3.01
CIRBP-231ENST00000591097 LRPPRCP42704 1394 aaKnown RBP33.82■■■■□ 3.01
CIRBP-231ENST00000591097 MSH6P52701 1360 aa33.82■■■■□ 3.01
CIRBP-231ENST00000591097 ADGRB1O14514 1584 aa33.81■■■■□ 3
CIRBP-231ENST00000591097 NEUROD1Q13562 356 aa33.81■■■■□ 3
CIRBP-231ENST00000591097 ABCC11Q96J66 1382 aa33.8■■■■□ 3
CIRBP-231ENST00000591097 YTHDC2Q9H6S0 1430 aaKnown RBP33.8■■■■□ 3
CIRBP-231ENST00000591097 KNDC1Q76NI1 1749 aa33.8■■■■□ 3
CIRBP-231ENST00000591097 L3MBTL2Q969R5 705 aa33.79■■■■□ 3
CIRBP-231ENST00000591097 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.77■■■■□ 3
CIRBP-231ENST00000591097 C19orf44Q9H6X5 657 aa33.77■■■■□ 3
CIRBP-231ENST00000591097 NALCNQ8IZF0 1738 aa33.75■■■□□ 2.99
CIRBP-231ENST00000591097 ADGRL3Q9HAR2 1447 aa33.74■■■□□ 2.99
CIRBP-231ENST00000591097 PIP4K2BP78356 416 aa33.74■■■□□ 2.99
CIRBP-231ENST00000591097 C14orf37Q86TY3 774 aa33.74■■■□□ 2.99
CIRBP-231ENST00000591097 STK26Q9P289 416 aa33.74■■■□□ 2.99
CIRBP-231ENST00000591097 DCCP43146 1447 aa33.73■■■□□ 2.99
CIRBP-231ENST00000591097 KIAA1210Q9ULL0 1709 aa33.71■■■□□ 2.99
CIRBP-231ENST00000591097 FAM135BQ49AJ0 1406 aa33.68■■■□□ 2.98
CIRBP-231ENST00000591097 SCAF1Q9H7N4 1312 aaKnown RBP33.68■■■□□ 2.98
CIRBP-231ENST00000591097 DLC1Q96QB1 1528 aa33.66■■■□□ 2.98
CIRBP-231ENST00000591097 CADPS2Q86UW7 1296 aa33.66■■■□□ 2.98
CIRBP-231ENST00000591097 PLEKHH1Q9ULM0 1364 aa33.65■■■□□ 2.98
CIRBP-231ENST00000591097 SIRT1Q96EB6 747 aa33.65■■■□□ 2.98
CIRBP-231ENST00000591097 SLAIN2Q9P270 581 aa33.64■■■□□ 2.98
CIRBP-231ENST00000591097 ATF3P18847 181 aa33.63■■■□□ 2.97
CIRBP-231ENST00000591097 WAPLQ7Z5K2 1190 aa33.63■■■□□ 2.97
CIRBP-231ENST00000591097 CLSPNQ9HAW4 1339 aa33.62■■■□□ 2.97
CIRBP-231ENST00000591097 ROBO1Q9Y6N7 1651 aa33.61■■■□□ 2.97
CIRBP-231ENST00000591097 TONSLQ96HA7 1378 aa33.61■■■□□ 2.97
CIRBP-231ENST00000591097 MST1RQ04912 1400 aa33.59■■■□□ 2.97
CIRBP-231ENST00000591097 CDC42BPGQ6DT37 1551 aa33.58■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms