RNA–Protein interactions for RNA: ENST00000591097.5

CIRBP-231, Transcript of cold inducible RNA binding protein, human

TSL 1 (best)

Gene CIRBP, Length 1,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-231	ENST00000591097	KIF1B	O60333	1816 aa		34.54	■■■■□ 3.12
CIRBP-231	ENST00000591097	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	34.51	■■■■□ 3.12
CIRBP-231	ENST00000591097	CCDC144A	A2RUR9	1427 aa		34.5	■■■■□ 3.11
CIRBP-231	ENST00000591097	PLEKHG1	Q9ULL1	1385 aa		34.46	■■■■□ 3.11
CIRBP-231	ENST00000591097	HDGF	P51858	240 aa	Known RBP	34.45	■■■■□ 3.11
CIRBP-231	ENST00000591097	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	34.45	■■■■□ 3.11
CIRBP-231	ENST00000591097	NEXMIF	Q5QGS0	1516 aa		34.45	■■■■□ 3.1
CIRBP-231	ENST00000591097	ANKRD30B	Q9BXX2	1392 aa		34.43	■■■■□ 3.1
CIRBP-231	ENST00000591097	SPATA31E1	Q6ZUB1	1445 aa		34.42	■■■■□ 3.1
CIRBP-231	ENST00000591097	PPP1R15A	O75807	674 aa	Predicted RBP	34.41	■■■■□ 3.1
CIRBP-231	ENST00000591097	NUTM2D	Q5VT03	806 aa	Predicted RBP	34.41	■■■■□ 3.1
CIRBP-231	ENST00000591097	ZNF326	Q5BKZ1	582 aa	Known RBP	34.4	■■■■□ 3.1
CIRBP-231	ENST00000591097	CERK	Q8TCT0	537 aa		34.39	■■■■□ 3.1
CIRBP-231	ENST00000591097	STRCP1	A6NGW2	1772 aa		34.36	■■■■□ 3.09
CIRBP-231	ENST00000591097	SLC26A8	Q96RN1	970 aa		34.35	■■■■□ 3.09
CIRBP-231	ENST00000591097	ADAMTS13	Q76LX8	1427 aa		34.34	■■■■□ 3.09
CIRBP-231	ENST00000591097	CPS1	P31327	1500 aa		34.34	■■■■□ 3.09
CIRBP-231	ENST00000591097	SETBP1	Q9Y6X0	1596 aa		34.32	■■■■□ 3.08
CIRBP-231	ENST00000591097	RPGRIP1L	Q68CZ1	1315 aa		34.32	■■■■□ 3.08
CIRBP-231	ENST00000591097	PPL	O60437	1756 aa		34.32	■■■■□ 3.08
CIRBP-231	ENST00000591097	NRXN3	Q9Y4C0	1643 aa		34.31	■■■■□ 3.08
CIRBP-231	ENST00000591097	SENP3	Q9H4L4	574 aa	Predicted RBP	34.3	■■■■□ 3.08
CIRBP-231	ENST00000591097	DIP2A	Q14689	1571 aa		34.29	■■■■□ 3.08
CIRBP-231	ENST00000591097	BCAN	Q96GW7	911 aa		34.29	■■■■□ 3.08
CIRBP-231	ENST00000591097	IQSEC2	Q5JU85	1478 aa		34.28	■■■■□ 3.08
CIRBP-231	ENST00000591097	TBX22	Q9Y458	520 aa		34.26	■■■■□ 3.08
CIRBP-231	ENST00000591097	IFT172	Q9UG01	1749 aa		34.26	■■■■□ 3.07
CIRBP-231	ENST00000591097	RGL3	Q3MIN7	710 aa		34.25	■■■■□ 3.07
CIRBP-231	ENST00000591097	NWD1	Q149M9	1564 aa		34.24	■■■■□ 3.07
CIRBP-231	ENST00000591097	VGF	O15240	615 aa	Predicted RBP	34.23	■■■■□ 3.07
CIRBP-231	ENST00000591097	LRRC7	Q96NW7	1537 aa		34.2	■■■■□ 3.07
CIRBP-231	ENST00000591097	KCNA6	P17658	529 aa		34.2	■■■■□ 3.06
CIRBP-231	ENST00000591097	CHD2	O14647	1828 aa	Known RBP	34.19	■■■■□ 3.06
CIRBP-231	ENST00000591097	PIK3R4	Q99570	1358 aa		34.18	■■■■□ 3.06
CIRBP-231	ENST00000591097	DHX57	Q6P158	1386 aa	Known RBP	34.17	■■■■□ 3.06
CIRBP-231	ENST00000591097	NKTR	P30414	1462 aa	Known RBP	34.15	■■■■□ 3.06
CIRBP-231	ENST00000591097	SETD1A	O15047	1707 aa	Known RBP	34.14	■■■■□ 3.06
CIRBP-231	ENST00000591097	FBXO41	Q8TF61	875 aa		34.14	■■■■□ 3.06
CIRBP-231	ENST00000591097	ADGRF5	Q8IZF2	1346 aa		34.14	■■■■□ 3.06
CIRBP-231	ENST00000591097	MET	P08581	1390 aa		34.11	■■■■□ 3.05
CIRBP-231	ENST00000591097	PTPRU	Q92729	1446 aa		34.11	■■■■□ 3.05
CIRBP-231	ENST00000591097	ALK	Q9UM73	1620 aa		34.1	■■■■□ 3.05
CIRBP-231	ENST00000591097	MYOM2	P54296	1465 aa		34.1	■■■■□ 3.05
CIRBP-231	ENST00000591097	XIRP1	Q702N8	1843 aa	Known RBP	34.09	■■■■□ 3.05
CIRBP-231	ENST00000591097	NRXN1	Q9ULB1	1477 aa		34.09	■■■■□ 3.05
CIRBP-231	ENST00000591097	PIK3C2G	O75747	1445 aa		34.09	■■■■□ 3.05
CIRBP-231	ENST00000591097	XRN1	Q8IZH2	1706 aa	Known RBP	34.07	■■■■□ 3.04
CIRBP-231	ENST00000591097	ILDR1	Q86SU0	546 aa	Predicted RBP	34.05	■■■■□ 3.04
CIRBP-231	ENST00000591097	PCGF6	Q9BYE7	350 aa		34.04	■■■■□ 3.04
CIRBP-231	ENST00000591097	TMEM94	Q12767	1356 aa		34.03	■■■■□ 3.04
CIRBP-231	ENST00000591097	AMOTL2	Q9Y2J4	779 aa		34.01	■■■■□ 3.04
CIRBP-231	ENST00000591097	PROSER2	Q86WR7	435 aa	Predicted RBP	33.99	■■■■□ 3.03
CIRBP-231	ENST00000591097	PRAG1	Q86YV5	1406 aa		33.96	■■■■□ 3.03
CIRBP-231	ENST00000591097	RBM33	Q96EV2	1170 aa	Known RBP	33.96	■■■■□ 3.03
CIRBP-231	ENST00000591097	ASXL1	Q8IXJ9	1541 aa		33.96	■■■■□ 3.03
CIRBP-231	ENST00000591097	DCAF11	Q8TEB1	546 aa		33.95	■■■■□ 3.03
CIRBP-231	ENST00000591097	STAC3	Q96MF2	364 aa		33.94	■■■■□ 3.02
CIRBP-231	ENST00000591097	SIN3A	Q96ST3	1273 aa		33.94	■■■■□ 3.02
CIRBP-231	ENST00000591097	UBAP1L	F5GYI3	381 aa		33.93	■■■■□ 3.02
CIRBP-231	ENST00000591097	LAMC1	P11047	1609 aa		33.92	■■■■□ 3.02
CIRBP-231	ENST00000591097	NCOA3	Q9Y6Q9	1424 aa		33.92	■■■■□ 3.02
CIRBP-231	ENST00000591097	C14orf93	Q9H972	538 aa	Known RBP	33.91	■■■■□ 3.02
CIRBP-231	ENST00000591097	PTCH1	Q13635	1447 aa		33.89	■■■■□ 3.02
CIRBP-231	ENST00000591097	KDM2A	Q9Y2K7	1162 aa		33.89	■■■■□ 3.02
CIRBP-231	ENST00000591097	TOM1	O60784	492 aa		33.86	■■■■□ 3.01
CIRBP-231	ENST00000591097	CFAP70	Q5T0N1	1121 aa		33.86	■■■■□ 3.01
CIRBP-231	ENST00000591097	ROBO2	Q9HCK4	1378 aa		33.85	■■■■□ 3.01
CIRBP-231	ENST00000591097	TMEM132E	Q6IEE7	984 aa		33.84	■■■■□ 3.01
CIRBP-231	ENST00000591097	TECPR2	O15040	1411 aa		33.83	■■■■□ 3.01
CIRBP-231	ENST00000591097	LRPPRC	P42704	1394 aa	Known RBP	33.82	■■■■□ 3.01
CIRBP-231	ENST00000591097	MSH6	P52701	1360 aa		33.82	■■■■□ 3.01
CIRBP-231	ENST00000591097	ADGRB1	O14514	1584 aa		33.81	■■■■□ 3
CIRBP-231	ENST00000591097	NEUROD1	Q13562	356 aa		33.81	■■■■□ 3
CIRBP-231	ENST00000591097	ABCC11	Q96J66	1382 aa		33.8	■■■■□ 3
CIRBP-231	ENST00000591097	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.8	■■■■□ 3
CIRBP-231	ENST00000591097	KNDC1	Q76NI1	1749 aa		33.8	■■■■□ 3
CIRBP-231	ENST00000591097	L3MBTL2	Q969R5	705 aa		33.79	■■■■□ 3
CIRBP-231	ENST00000591097	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.77	■■■■□ 3
CIRBP-231	ENST00000591097	C19orf44	Q9H6X5	657 aa		33.77	■■■■□ 3
CIRBP-231	ENST00000591097	NALCN	Q8IZF0	1738 aa		33.75	■■■□□ 2.99
CIRBP-231	ENST00000591097	ADGRL3	Q9HAR2	1447 aa		33.74	■■■□□ 2.99
CIRBP-231	ENST00000591097	PIP4K2B	P78356	416 aa		33.74	■■■□□ 2.99
CIRBP-231	ENST00000591097	C14orf37	Q86TY3	774 aa		33.74	■■■□□ 2.99
CIRBP-231	ENST00000591097	STK26	Q9P289	416 aa		33.74	■■■□□ 2.99
CIRBP-231	ENST00000591097	DCC	P43146	1447 aa		33.73	■■■□□ 2.99
CIRBP-231	ENST00000591097	KIAA1210	Q9ULL0	1709 aa		33.71	■■■□□ 2.99
CIRBP-231	ENST00000591097	FAM135B	Q49AJ0	1406 aa		33.68	■■■□□ 2.98
CIRBP-231	ENST00000591097	SCAF1	Q9H7N4	1312 aa	Known RBP	33.68	■■■□□ 2.98
CIRBP-231	ENST00000591097	DLC1	Q96QB1	1528 aa		33.66	■■■□□ 2.98
CIRBP-231	ENST00000591097	CADPS2	Q86UW7	1296 aa		33.66	■■■□□ 2.98
CIRBP-231	ENST00000591097	PLEKHH1	Q9ULM0	1364 aa		33.65	■■■□□ 2.98
CIRBP-231	ENST00000591097	SIRT1	Q96EB6	747 aa		33.65	■■■□□ 2.98
CIRBP-231	ENST00000591097	SLAIN2	Q9P270	581 aa		33.64	■■■□□ 2.98
CIRBP-231	ENST00000591097	ATF3	P18847	181 aa		33.63	■■■□□ 2.97
CIRBP-231	ENST00000591097	WAPL	Q7Z5K2	1190 aa		33.63	■■■□□ 2.97
CIRBP-231	ENST00000591097	CLSPN	Q9HAW4	1339 aa		33.62	■■■□□ 2.97
CIRBP-231	ENST00000591097	ROBO1	Q9Y6N7	1651 aa		33.61	■■■□□ 2.97
CIRBP-231	ENST00000591097	TONSL	Q96HA7	1378 aa		33.61	■■■□□ 2.97
CIRBP-231	ENST00000591097	MST1R	Q04912	1400 aa		33.59	■■■□□ 2.97
CIRBP-231	ENST00000591097	CDC42BPG	Q6DT37	1551 aa		33.58	■■■□□ 2.97

Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms