RNA–Protein interactions for RNA: ENST00000590701.5

ERCC1-211, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 3

Gene ERCC1, Length 345 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-211ENST00000590701 CHD2O14647 1828 aaKnown RBP22.95■■□□□ 1.26
ERCC1-211ENST00000590701 NKTRP30414 1462 aaKnown RBP22.95■■□□□ 1.26
ERCC1-211ENST00000590701 NWD1Q149M9 1564 aa22.95■■□□□ 1.26
ERCC1-211ENST00000590701 MYO5BQ9ULV0 1848 aa22.95■■□□□ 1.26
ERCC1-211ENST00000590701 ADGRB3O60242 1522 aa22.94■■□□□ 1.26
ERCC1-211ENST00000590701 ANKRD30AQ9BXX3 1397 aa22.94■■□□□ 1.26
ERCC1-211ENST00000590701 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
ERCC1-211ENST00000590701 PPP1R15AO75807 674 aaPredicted RBP22.9■■□□□ 1.26
ERCC1-211ENST00000590701 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
ERCC1-211ENST00000590701 C14orf37Q86TY3 774 aa22.9■■□□□ 1.26
ERCC1-211ENST00000590701 UPF1Q92900 1129 aaKnown RBP eCLIP22.9■■□□□ 1.26
ERCC1-211ENST00000590701 APLP2Q06481 763 aa22.89■■□□□ 1.25
ERCC1-211ENST00000590701 MEX3CQ5U5Q3 659 aaKnown RBP22.89■■□□□ 1.25
ERCC1-211ENST00000590701 FGD6Q6ZV73 1430 aa22.89■■□□□ 1.25
ERCC1-211ENST00000590701 LRP6O75581 1613 aa22.89■■□□□ 1.25
ERCC1-211ENST00000590701 COL16A1Q07092 1604 aaPredicted RBP22.89■■□□□ 1.25
ERCC1-211ENST00000590701 PLEKHG1Q9ULL1 1385 aa22.89■■□□□ 1.25
ERCC1-211ENST00000590701 TBX22Q9Y458 520 aa22.88■■□□□ 1.25
ERCC1-211ENST00000590701 ZFYVE9O95405 1425 aa22.88■■□□□ 1.25
ERCC1-211ENST00000590701 RIMS2Q9UQ26 1411 aa22.88■■□□□ 1.25
ERCC1-211ENST00000590701 CHGAP10645 457 aaKnown RBP22.87■■□□□ 1.25
ERCC1-211ENST00000590701 HDGFP51858 240 aaKnown RBP22.87■■□□□ 1.25
ERCC1-211ENST00000590701 ZNF772Q68DY9 489 aaPredicted RBP22.85■■□□□ 1.25
ERCC1-211ENST00000590701 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
ERCC1-211ENST00000590701 GCC2Q8IWJ2 1684 aa22.84■■□□□ 1.25
ERCC1-211ENST00000590701 TMEM131LA2VDJ0 1609 aa22.82■■□□□ 1.24
ERCC1-211ENST00000590701 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
ERCC1-211ENST00000590701 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
ERCC1-211ENST00000590701 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
ERCC1-211ENST00000590701 C19orf44Q9H6X5 657 aa22.82■■□□□ 1.24
ERCC1-211ENST00000590701 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.82■■□□□ 1.24
ERCC1-211ENST00000590701 ATF3P18847 181 aa22.81■■□□□ 1.24
ERCC1-211ENST00000590701 FAM50AQ14320 339 aaKnown RBP22.8■■□□□ 1.24
ERCC1-211ENST00000590701 CADPS2Q86UW7 1296 aa22.8■■□□□ 1.24
ERCC1-211ENST00000590701 RXRBP28702 533 aa22.79■■□□□ 1.24
ERCC1-211ENST00000590701 NCOA3Q9Y6Q9 1424 aa22.79■■□□□ 1.24
ERCC1-211ENST00000590701 ADAMTS13Q76LX8 1427 aa22.78■■□□□ 1.24
ERCC1-211ENST00000590701 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.78■■□□□ 1.24
ERCC1-211ENST00000590701 RPRD2Q5VT52 1461 aaKnown RBP22.78■■□□□ 1.24
ERCC1-211ENST00000590701 ANKRD50Q9ULJ7 1429 aa22.77■■□□□ 1.24
ERCC1-211ENST00000590701 BRINP3Q76B58 766 aa22.76■■□□□ 1.23
ERCC1-211ENST00000590701 AMOTL2Q9Y2J4 779 aa22.76■■□□□ 1.23
ERCC1-211ENST00000590701 ADGRL2O95490 1459 aa22.76■■□□□ 1.23
ERCC1-211ENST00000590701 AHDC1Q5TGY3 1603 aaPredicted RBP22.75■■□□□ 1.23
ERCC1-211ENST00000590701 SHPRHQ149N8 1683 aa22.74■■□□□ 1.23
ERCC1-211ENST00000590701 PTPRUQ92729 1446 aa22.72■■□□□ 1.23
ERCC1-211ENST00000590701 AFF2P51816 1311 aa22.71■■□□□ 1.23
ERCC1-211ENST00000590701 DIP2AQ14689 1571 aa22.69■■□□□ 1.22
ERCC1-211ENST00000590701 PIK3R4Q99570 1358 aa22.69■■□□□ 1.22
ERCC1-211ENST00000590701 E9PCH4 1651 aa22.68■■□□□ 1.22
ERCC1-211ENST00000590701 DDX17Q92841 729 aaKnown RBP22.68■■□□□ 1.22
ERCC1-211ENST00000590701 QTRT2Q9H974 415 aaKnown RBP22.65■■□□□ 1.22
ERCC1-211ENST00000590701 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
ERCC1-211ENST00000590701 TRPM2O94759 1503 aa22.63■■□□□ 1.21
ERCC1-211ENST00000590701 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
ERCC1-211ENST00000590701 UNC13BO14795 1591 aa22.62■■□□□ 1.21
ERCC1-211ENST00000590701 CDK12Q9NYV4 1490 aaPredicted RBP22.61■■□□□ 1.21
ERCC1-211ENST00000590701 SETD5Q9C0A6 1442 aa22.61■■□□□ 1.21
ERCC1-211ENST00000590701 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
ERCC1-211ENST00000590701 MST1RQ04912 1400 aa22.6■■□□□ 1.21
ERCC1-211ENST00000590701 RBM6P78332 1123 aaKnown RBP22.59■■□□□ 1.21
ERCC1-211ENST00000590701 NUP155O75694 1391 aa22.57■■□□□ 1.2
ERCC1-211ENST00000590701 METP08581 1390 aa22.57■■□□□ 1.2
ERCC1-211ENST00000590701 NHSL1Q5SYE7 1610 aa22.57■■□□□ 1.2
ERCC1-211ENST00000590701 NRXN3Q9Y4C0 1643 aa22.57■■□□□ 1.2
ERCC1-211ENST00000590701 RGS12O14924 1447 aa22.57■■□□□ 1.2
ERCC1-211ENST00000590701 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
ERCC1-211ENST00000590701 ZNF326Q5BKZ1 582 aaKnown RBP22.56■■□□□ 1.2
ERCC1-211ENST00000590701 DCCP43146 1447 aa22.56■■□□□ 1.2
ERCC1-211ENST00000590701 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
ERCC1-211ENST00000590701 IQGAP3Q86VI3 1631 aa22.55■■□□□ 1.2
ERCC1-211ENST00000590701 XRN1Q8IZH2 1706 aaKnown RBP22.54■■□□□ 1.2
ERCC1-211ENST00000590701 PNPLA6Q8IY17 1366 aa22.54■■□□□ 1.2
ERCC1-211ENST00000590701 ITGAEP38570 1179 aa22.53■■□□□ 1.2
ERCC1-211ENST00000590701 SETBP1Q9Y6X0 1596 aa22.49■■□□□ 1.19
ERCC1-211ENST00000590701 ORAI2Q96SN7 254 aa22.48■■□□□ 1.19
ERCC1-211ENST00000590701 ROCK1Q13464 1354 aa22.48■■□□□ 1.19
ERCC1-211ENST00000590701 ADGRL3Q9HAR2 1447 aa22.47■■□□□ 1.19
ERCC1-211ENST00000590701 NALCNQ8IZF0 1738 aa22.46■■□□□ 1.19
ERCC1-211ENST00000590701 USP21Q9UK80 565 aa22.46■■□□□ 1.19
ERCC1-211ENST00000590701 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
ERCC1-211ENST00000590701 SPHKAPQ2M3C7 1700 aa22.43■■□□□ 1.18
ERCC1-211ENST00000590701 SRCAPQ6ZRS2 3230 aa22.42■■□□□ 1.18
ERCC1-211ENST00000590701 SOS2Q07890 1332 aaPredicted RBP22.41■■□□□ 1.18
ERCC1-211ENST00000590701 TRPC5Q9UL62 973 aaPredicted RBP22.41■■□□□ 1.18
ERCC1-211ENST00000590701 ATAD2Q6PL18 1390 aa22.39■■□□□ 1.18
ERCC1-211ENST00000590701 PPARGC1BQ86YN6 1023 aaKnown RBP22.39■■□□□ 1.17
ERCC1-211ENST00000590701 FNBP4Q8N3X1 1017 aaPredicted RBP22.39■■□□□ 1.17
ERCC1-211ENST00000590701 NEXMIFQ5QGS0 1516 aa22.38■■□□□ 1.17
ERCC1-211ENST00000590701 ROBO2Q9HCK4 1378 aa22.37■■□□□ 1.17
ERCC1-211ENST00000590701 ZRANB1Q9UGI0 708 aa22.36■■□□□ 1.17
ERCC1-211ENST00000590701 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
ERCC1-211ENST00000590701 LAMC1P11047 1609 aa22.35■■□□□ 1.17
ERCC1-211ENST00000590701 ATRNO75882 1429 aa22.32■■□□□ 1.16
ERCC1-211ENST00000590701 KIF1BO60333 1816 aa22.32■■□□□ 1.16
ERCC1-211ENST00000590701 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
ERCC1-211ENST00000590701 VGFO15240 615 aaPredicted RBP22.3■■□□□ 1.16
ERCC1-211ENST00000590701 XPCQ01831 940 aaPredicted RBP22.3■■□□□ 1.16
ERCC1-211ENST00000590701 ESCO1Q5FWF5 840 aa22.3■■□□□ 1.16
ERCC1-211ENST00000590701 BCL9LQ86UU0 1499 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms