RNA–Protein interactions for RNA: ENST00000590684.5

TCF3-215, Transcript of transcription factor 3, humanhuman

TSL 3

Gene TCF3, Length 1,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-215ENST00000590684 XIRP1Q702N8 1843 aaKnown RBP24.55■■□□□ 1.52
TCF3-215ENST00000590684 HFM1A2PYH4 1435 aa24.54■■□□□ 1.52
TCF3-215ENST00000590684 SPHKAPQ2M3C7 1700 aa24.54■■□□□ 1.52
TCF3-215ENST00000590684 PLEKHG1Q9ULL1 1385 aa24.54■■□□□ 1.52
TCF3-215ENST00000590684 NWD1Q149M9 1564 aa24.52■■□□□ 1.52
TCF3-215ENST00000590684 CHGAP10645 457 aaKnown RBP24.52■■□□□ 1.52
TCF3-215ENST00000590684 KCNA6P17658 529 aa24.5■■□□□ 1.51
TCF3-215ENST00000590684 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
TCF3-215ENST00000590684 DISP3Q9P2K9 1392 aa24.49■■□□□ 1.51
TCF3-215ENST00000590684 PPP1R15AO75807 674 aaPredicted RBP24.49■■□□□ 1.51
TCF3-215ENST00000590684 HSPA1LP34931 641 aa24.49■■□□□ 1.51
TCF3-215ENST00000590684 BCANQ96GW7 911 aa24.48■■□□□ 1.51
TCF3-215ENST00000590684 NKTRP30414 1462 aaKnown RBP24.47■■□□□ 1.51
TCF3-215ENST00000590684 HDGFP51858 240 aaKnown RBP24.47■■□□□ 1.51
TCF3-215ENST00000590684 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
TCF3-215ENST00000590684 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.46■■□□□ 1.51
TCF3-215ENST00000590684 NUTM2DQ5VT03 806 aaPredicted RBP24.45■■□□□ 1.5
TCF3-215ENST00000590684 ADAMTS13Q76LX8 1427 aa24.44■■□□□ 1.5
TCF3-215ENST00000590684 TRPM2O94759 1503 aa24.44■■□□□ 1.5
TCF3-215ENST00000590684 CLTCL1P53675 1640 aa24.43■■□□□ 1.5
TCF3-215ENST00000590684 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
TCF3-215ENST00000590684 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
TCF3-215ENST00000590684 RBM33Q96EV2 1170 aaKnown RBP24.41■■□□□ 1.5
TCF3-215ENST00000590684 TBX22Q9Y458 520 aa24.4■■□□□ 1.5
TCF3-215ENST00000590684 PROSER2Q86WR7 435 aaPredicted RBP24.39■■□□□ 1.5
TCF3-215ENST00000590684 TRIM52Q96A61 297 aa24.38■■□□□ 1.49
TCF3-215ENST00000590684 NRXN3Q9Y4C0 1643 aa24.36■■□□□ 1.49
TCF3-215ENST00000590684 ILDR2Q71H61 639 aa24.35■■□□□ 1.49
TCF3-215ENST00000590684 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
TCF3-215ENST00000590684 NEXMIFQ5QGS0 1516 aa24.34■■□□□ 1.49
TCF3-215ENST00000590684 PIK3R4Q99570 1358 aa24.33■■□□□ 1.49
TCF3-215ENST00000590684 MED1Q15648 1581 aaPredicted RBP24.33■■□□□ 1.48
TCF3-215ENST00000590684 ZNF326Q5BKZ1 582 aaKnown RBP24.33■■□□□ 1.48
TCF3-215ENST00000590684 SLC4A1APQ9BWU0 796 aaKnown RBP24.33■■□□□ 1.48
TCF3-215ENST00000590684 FAM135BQ49AJ0 1406 aa24.31■■□□□ 1.48
TCF3-215ENST00000590684 KIF1BO60333 1816 aa24.31■■□□□ 1.48
TCF3-215ENST00000590684 MSH6P52701 1360 aa24.31■■□□□ 1.48
TCF3-215ENST00000590684 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
TCF3-215ENST00000590684 ROBO1Q9Y6N7 1651 aa24.28■■□□□ 1.48
TCF3-215ENST00000590684 NCOA3Q9Y6Q9 1424 aa24.27■■□□□ 1.48
TCF3-215ENST00000590684 XRN1Q8IZH2 1706 aaKnown RBP24.26■■□□□ 1.47
TCF3-215ENST00000590684 FOXD1Q16676 465 aa24.24■■□□□ 1.47
TCF3-215ENST00000590684 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
TCF3-215ENST00000590684 METP08581 1390 aa24.23■■□□□ 1.47
TCF3-215ENST00000590684 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.2■■□□□ 1.47
TCF3-215ENST00000590684 SLAIN2Q9P270 581 aa24.19■■□□□ 1.46
TCF3-215ENST00000590684 C14orf37Q86TY3 774 aa24.18■■□□□ 1.46
TCF3-215ENST00000590684 MPHOSPH9Q99550 1183 aa24.18■■□□□ 1.46
TCF3-215ENST00000590684 PPLO60437 1756 aa24.17■■□□□ 1.46
TCF3-215ENST00000590684 SETD1AO15047 1707 aaKnown RBP24.17■■□□□ 1.46
TCF3-215ENST00000590684 SETD5Q9C0A6 1442 aa24.17■■□□□ 1.46
TCF3-215ENST00000590684 C19orf44Q9H6X5 657 aa24.15■■□□□ 1.46
TCF3-215ENST00000590684 CCDC144AA2RUR9 1427 aa24.15■■□□□ 1.46
TCF3-215ENST00000590684 RPGRIP1LQ68CZ1 1315 aa24.15■■□□□ 1.46
TCF3-215ENST00000590684 VGFO15240 615 aaPredicted RBP24.14■■□□□ 1.46
TCF3-215ENST00000590684 SPATA31E1Q6ZUB1 1445 aa24.12■■□□□ 1.45
TCF3-215ENST00000590684 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
TCF3-215ENST00000590684 DCCP43146 1447 aa24.12■■□□□ 1.45
TCF3-215ENST00000590684 PHLPP1O60346 1717 aa24.11■■□□□ 1.45
TCF3-215ENST00000590684 SOCS7O14512 581 aa24.1■■□□□ 1.45
TCF3-215ENST00000590684 ATF3P18847 181 aa24.1■■□□□ 1.45
TCF3-215ENST00000590684 RAB3GAP2Q9H2M9 1393 aa24.1■■□□□ 1.45
TCF3-215ENST00000590684 COL16A1Q07092 1604 aaPredicted RBP24.08■■□□□ 1.45
TCF3-215ENST00000590684 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.44
TCF3-215ENST00000590684 NALCNQ8IZF0 1738 aa24.08■■□□□ 1.44
TCF3-215ENST00000590684 IFT172Q9UG01 1749 aa24.08■■□□□ 1.44
TCF3-215ENST00000590684 ACIN1Q9UKV3 1341 aaKnown RBP24.07■■□□□ 1.44
TCF3-215ENST00000590684 PTCH1Q13635 1447 aa24.06■■□□□ 1.44
TCF3-215ENST00000590684 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
TCF3-215ENST00000590684 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
TCF3-215ENST00000590684 AHDC1Q5TGY3 1603 aaPredicted RBP24.05■■□□□ 1.44
TCF3-215ENST00000590684 MST1RQ04912 1400 aa24.05■■□□□ 1.44
TCF3-215ENST00000590684 ADGRF5Q8IZF2 1346 aa24.04■■□□□ 1.44
TCF3-215ENST00000590684 RGL3Q3MIN7 710 aa24.04■■□□□ 1.44
TCF3-215ENST00000590684 ROBO2Q9HCK4 1378 aa24.03■■□□□ 1.44
TCF3-215ENST00000590684 BRINP3Q76B58 766 aa24.02■■□□□ 1.44
TCF3-215ENST00000590684 ANKRD30BQ9BXX2 1392 aa24.01■■□□□ 1.43
TCF3-215ENST00000590684 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
TCF3-215ENST00000590684 JCADQ9P266 1359 aa24■■□□□ 1.43
TCF3-215ENST00000590684 RGS17Q9UGC6 210 aaPredicted RBP23.99■■□□□ 1.43
TCF3-215ENST00000590684 PIK3C2GO75747 1445 aa23.98■■□□□ 1.43
TCF3-215ENST00000590684 NHSL1Q5SYE7 1610 aa23.95■■□□□ 1.42
TCF3-215ENST00000590684 SHPRHQ149N8 1683 aa23.93■■□□□ 1.42
TCF3-215ENST00000590684 C1orf167Q5SNV9 1468 aa23.92■■□□□ 1.42
TCF3-215ENST00000590684 TECPR2O15040 1411 aa23.92■■□□□ 1.42
TCF3-215ENST00000590684 NRXN1Q9ULB1 1477 aa23.91■■□□□ 1.42
TCF3-215ENST00000590684 LRP6O75581 1613 aa23.91■■□□□ 1.42
TCF3-215ENST00000590684 MYOM2P54296 1465 aa23.91■■□□□ 1.42
TCF3-215ENST00000590684 LRPPRCP42704 1394 aaKnown RBP23.9■■□□□ 1.42
TCF3-215ENST00000590684 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.42
TCF3-215ENST00000590684 SPATA31A6Q5VVP1 1343 aa23.89■■□□□ 1.41
TCF3-215ENST00000590684 CDC42BPGQ6DT37 1551 aa23.88■■□□□ 1.41
TCF3-215ENST00000590684 HRCP23327 699 aa23.87■■□□□ 1.41
TCF3-215ENST00000590684 TMEM132EQ6IEE7 984 aa23.87■■□□□ 1.41
TCF3-215ENST00000590684 DDX17Q92841 729 aaKnown RBP23.86■■□□□ 1.41
TCF3-215ENST00000590684 STK26Q9P289 416 aa23.86■■□□□ 1.41
TCF3-215ENST00000590684 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
TCF3-215ENST00000590684 LAMC1P11047 1609 aa23.85■■□□□ 1.41
TCF3-215ENST00000590684 YTHDC2Q9H6S0 1430 aaKnown RBP23.85■■□□□ 1.41
TCF3-215ENST00000590684 POTEAQ6S8J7 498 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms