RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 CC2D2AQ9P2K1 1620 aa9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 SAMD9Q5K651 1589 aa9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 GOLGA2Q08379 1002 aa9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 UTP14CQ5TAP6 766 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 CHMP4BQ9H444 224 aaKnown RBP9.75□□□□□ -0.85
NEDD4L-229ENST00000590506 ROCK1Q13464 1354 aa9.74□□□□□ -0.85
NEDD4L-229ENST00000590506 ZNF692Q9BU19 519 aaPredicted RBP9.74□□□□□ -0.85
NEDD4L-229ENST00000590506 DAPK1P53355 1430 aa9.74□□□□□ -0.85
NEDD4L-229ENST00000590506 TNPO1Q92973 898 aaKnown RBP9.74□□□□□ -0.85
NEDD4L-229ENST00000590506 PER1O15534 1290 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 ZSCAN20P17040 1043 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 MTERF4Q7Z6M4 381 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 ANP32BQ92688 251 aaKnown RBP9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 KIF21AQ7Z4S6 1674 aa9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 INSRP06213 1382 aa9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 RALGAPBQ86X10 1494 aa9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 ZNF644Q9H582 1327 aaPredicted RBP9.73□□□□□ -0.85
NEDD4L-229ENST00000590506 POLA1P09884 1462 aaPredicted RBP9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 DYNC1I1O14576 645 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 MFAP1P55081 439 aaKnown RBP9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 PPP4R3BQ5MIZ7 849 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 CLUAP1Q96AJ1 413 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 COG6Q9Y2V7 657 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 SLFN5Q08AF3 891 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 PKD2Q13563 968 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 HSCBQ8IWL3 235 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 CCDC94Q9BW85 323 aaPredicted RBP9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 C22orf23Q9BZE7 217 aa9.72□□□□□ -0.85
NEDD4L-229ENST00000590506 FANCD2Q9BXW9 1451 aa9.71□□□□□ -0.85
NEDD4L-229ENST00000590506 ZNF608Q9ULD9 1512 aaPredicted RBP9.71□□□□□ -0.85
NEDD4L-229ENST00000590506 ABCC5O15440 1437 aa9.71□□□□□ -0.85
NEDD4L-229ENST00000590506 SPINK5Q9NQ38 1064 aaPredicted RBP9.71□□□□□ -0.86
NEDD4L-229ENST00000590506 PDZRN3Q9UPQ7 1066 aa9.71□□□□□ -0.86
NEDD4L-229ENST00000590506 NCLP19338 710 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 PZPP20742 1482 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 ZNF521Q96K83 1311 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 KIAA1107Q9UPP5 1409 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 TNNT2P45379 298 aaPredicted RBP9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 SKOR2Q2VWA4 1001 aaPredicted RBP9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 GBP4Q96PP9 640 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 RTEL1-TNFRSF6BF6WH68 1400 aa9.7□□□□□ -0.86
NEDD4L-229ENST00000590506 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 WDR43Q15061 677 aaKnown RBP eCLIP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 EPRSP07814 1512 aaKnown RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 CBX1P83916 185 aa9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 PAXIP1Q6ZW49 1069 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 CDK13Q14004 1512 aaKnown RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 JARID2Q92833 1246 aaPredicted RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 NOL7Q9UMY1 257 aaKnown RBP9.69□□□□□ -0.86
NEDD4L-229ENST00000590506 TDRD9Q8NDG6 1382 aaKnown RBP9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 UHRF1BP1Q6BDS2 1440 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 DNMBPQ6XZF7 1577 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 DDIT3P35638 169 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 SASS6Q6UVJ0 657 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 PANK3Q9H999 370 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 ZBTB7CA1YPR0 619 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 CFAP44Q96MT7 982 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 TMEM51Q9NW97 253 aa9.68□□□□□ -0.86
NEDD4L-229ENST00000590506 VGLL3A8MV65 326 aa9.67□□□□□ -0.86
NEDD4L-229ENST00000590506 PCDHB15Q9Y5E8 787 aa9.67□□□□□ -0.86
NEDD4L-229ENST00000590506 NKTRP30414 1462 aaKnown RBP9.67□□□□□ -0.86
NEDD4L-229ENST00000590506 NESP48681 1621 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 RAB3GAP1Q15042 981 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 TRMT2AQ8IZ69 625 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 IPO4Q8TEX9 1081 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 TSC1Q92574 1164 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 NCOA3Q9Y6Q9 1424 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 PDE3AQ14432 1141 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 CSPP1Q1MSJ5 1256 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 PMFBP1Q8TBY8 1022 aa9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 GTPBP4Q9BZE4 634 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 DNMT1P26358 1616 aaKnown RBP9.66□□□□□ -0.86
NEDD4L-229ENST00000590506 HS1BP3Q53T59 392 aa9.65□□□□□ -0.86
NEDD4L-229ENST00000590506 DDX49Q9Y6V7 483 aaKnown RBP9.65□□□□□ -0.86
NEDD4L-229ENST00000590506 KIF20AO95235 890 aa9.65□□□□□ -0.86
NEDD4L-229ENST00000590506 PTMSP20962 102 aa9.65□□□□□ -0.86
NEDD4L-229ENST00000590506 ZKSCAN5Q9Y2L8 839 aa9.65□□□□□ -0.86
NEDD4L-229ENST00000590506 DMRT2Q9Y5R5 561 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 LETM1O95202 739 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 SSFA2P28290 1259 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 SMC5Q8IY18 1101 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 PLCD3Q8N3E9 789 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 ZNF830Q96NB3 372 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 RBSNQ9H1K0 784 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 TNNQ9UQP3 1299 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 CAMSAP2Q08AD1 1489 aa9.64□□□□□ -0.87
NEDD4L-229ENST00000590506 APAF1O14727 1248 aa9.63□□□□□ -0.87
NEDD4L-229ENST00000590506 ATP2B3Q16720 1220 aa9.63□□□□□ -0.87
NEDD4L-229ENST00000590506 PPP2R1AP30153 589 aa9.63□□□□□ -0.87
NEDD4L-229ENST00000590506 TAF7LQ5H9L4 462 aa9.63□□□□□ -0.87
NEDD4L-229ENST00000590506 ZNF777Q9ULD5 760 aaPredicted RBP9.63□□□□□ -0.87
NEDD4L-229ENST00000590506 ZNF710Q8N1W2 664 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms